Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
---|---|
Accession | NC_009053 |
Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is wecB [H]
Identifier: 126209016
GI number: 126209016
Start: 1774599
End: 1775678
Strand: Reverse
Name: wecB [H]
Synonym: APL_1552
Alternate gene names: 126209016
Gene position: 1775678-1774599 (Counterclockwise)
Preceding gene: 126209017
Following gene: 126209015
Centisome position: 78.07
GC content: 46.39
Gene sequence:
>1080_bases ATGGCTCCGCTGGCAAAAATGTTGGCGGAGGATGCGAGTTTTGAGGCAAAGGTCTGCGTAACCGGTCAGCATCGCGAGAT GCTGGATCAAGTTTTGAACCTTTTCGAAATTCGGCCCGATTTTGATTTAAATATTATGCAAGTCGGGCAAGATCTAACCG ACATCAGCGTACGAATTTTGCAATCGCTGAAAGATCTGTTTGCACGCTATCGTCCTGATATGGTATTGGTACACGGCGAT ACCACTACTACTTTTGCCGCCGCACTCGCCTGCTATTATCATCAAATTCCGGTCGGACATATCGAAGCGGGCTTACGCAG CGGCGATCGTTATGCGCCGTTTCCGGAAGAAGGTAATCGTTGCCTGACCGGCGTATTAGCCGACTATCACTTCGCACCGA CCGAGCAAGCACGTCTAAATTTATTACAAGAACATAAAGCGCCCGATAAGATTTGGGTAACCGGCAATACGGTGCTTGAT GCGTTACATTGCGTATCCTCCCGAATCCGACGAGATAAAAGTTTGGTTAAAAACTTGAATCGACATTATCAATTTTTAGA CGAGCGGAAAAAACTCATTTTGGTTACCGGACACCGCCGAGAAAGTTTCGGCGCAGGCTTAGAACATATTTGCGAAGCGT TGGTCACGCTTGCCAAACGGCATACCGATGTGCAGATTGTTTATCCGGTACATCTTAATCCTTGCGTACGCGAACCGGTC AGCCGTTTACTTAGCGGAGTGGAAAATATCTTCTTAATCGAGCCGCAAGAGTATTTGTCCTTCGTCTATTTAATGGAACG TGCTTATTTGATTTTGACCGATTCCGGCGGTATTCAAGAAGAAGCTCCCGCATTAAATAAACCGGTGTTGGTAATGCGTA ACGCAACCGAACGTCCGGAAGCGGTTGCGGCGGGAACGGTTCGTCTGGTTGGAACCGAAGCTAAAAGCATTGTACAAGAG GTGAGCTTGCTTTTAACCGATAAGCGGATTTATCGAACGATGGCGCAAGCAAAGAATCCTTATGCAAAGGAGAATGCTTG CCGATATATTATTGACGTACTTAAACAAATATTGAATTAG
Upstream 100 bases:
>100_bases GTCATTGTTTCAACAATGGGATTATTACGAAAAAAACCAGCAGATGCCGAACAAAATTAAAATCCTCAGCGTATTCGGTA CGCGACCGGAAGCGATCAAG
Downstream 100 bases:
>100_bases TCGGCAGGCTTTGTTCTTGGAAAAGACAAAGCCTGTTTTTTGTTACGGACGAACTTAAAGCCAAACGAGAAATATCATAT GAATACGTTTAATCGAATTG
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAPLAKMLAEDASFEAKVCVTGQHREMLDQVLNLFEIRPDFDLNIMQVGQDLTDISVRILQSLKDLFARYRPDMVLVHGD TTTTFAAALACYYHQIPVGHIEAGLRSGDRYAPFPEEGNRCLTGVLADYHFAPTEQARLNLLQEHKAPDKIWVTGNTVLD ALHCVSSRIRRDKSLVKNLNRHYQFLDERKKLILVTGHRRESFGAGLEHICEALVTLAKRHTDVQIVYPVHLNPCVREPV SRLLSGVENIFLIEPQEYLSFVYLMERAYLILTDSGGIQEEAPALNKPVLVMRNATERPEAVAAGTVRLVGTEAKSIVQE VSLLLTDKRIYRTMAQAKNPYAKENACRYIIDVLKQILN
Sequences:
>Translated_359_residues MAPLAKMLAEDASFEAKVCVTGQHREMLDQVLNLFEIRPDFDLNIMQVGQDLTDISVRILQSLKDLFARYRPDMVLVHGD TTTTFAAALACYYHQIPVGHIEAGLRSGDRYAPFPEEGNRCLTGVLADYHFAPTEQARLNLLQEHKAPDKIWVTGNTVLD ALHCVSSRIRRDKSLVKNLNRHYQFLDERKKLILVTGHRRESFGAGLEHICEALVTLAKRHTDVQIVYPVHLNPCVREPV SRLLSGVENIFLIEPQEYLSFVYLMERAYLILTDSGGIQEEAPALNKPVLVMRNATERPEAVAAGTVRLVGTEAKSIVQE VSLLLTDKRIYRTMAQAKNPYAKENACRYIIDVLKQILN >Mature_358_residues APLAKMLAEDASFEAKVCVTGQHREMLDQVLNLFEIRPDFDLNIMQVGQDLTDISVRILQSLKDLFARYRPDMVLVHGDT TTTFAAALACYYHQIPVGHIEAGLRSGDRYAPFPEEGNRCLTGVLADYHFAPTEQARLNLLQEHKAPDKIWVTGNTVLDA LHCVSSRIRRDKSLVKNLNRHYQFLDERKKLILVTGHRRESFGAGLEHICEALVTLAKRHTDVQIVYPVHLNPCVREPVS RLLSGVENIFLIEPQEYLSFVYLMERAYLILTDSGGIQEEAPALNKPVLVMRNATERPEAVAAGTVRLVGTEAKSIVQEV SLLLTDKRIYRTMAQAKNPYAKENACRYIIDVLKQILN
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=356, Percent_Identity=62.9213483146067, Blast_Score=451, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 40562; Mature: 40431
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLAKMLAEDASFEAKVCVTGQHREMLDQVLNLFEIRPDFDLNIMQVGQDLTDISVRIL CCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHH QSLKDLFARYRPDMVLVHGDTTTTFAAALACYYHQIPVGHIEAGLRSGDRYAPFPEEGNR HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCH CLTGVLADYHFAPTEQARLNLLQEHKAPDKIWVTGNTVLDALHCVSSRIRRDKSLVKNLN HHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH RHYQFLDERKKLILVTGHRRESFGAGLEHICEALVTLAKRHTDVQIVYPVHLNPCVREPV HHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH SRLLSGVENIFLIEPQEYLSFVYLMERAYLILTDSGGIQEEAPALNKPVLVMRNATERPE HHHHHCCCCEEEECHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCC AVAAGTVRLVGTEAKSIVQEVSLLLTDKRIYRTMAQAKNPYAKENACRYIIDVLKQILN HHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure APLAKMLAEDASFEAKVCVTGQHREMLDQVLNLFEIRPDFDLNIMQVGQDLTDISVRIL CHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHH QSLKDLFARYRPDMVLVHGDTTTTFAAALACYYHQIPVGHIEAGLRSGDRYAPFPEEGNR HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCH CLTGVLADYHFAPTEQARLNLLQEHKAPDKIWVTGNTVLDALHCVSSRIRRDKSLVKNLN HHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH RHYQFLDERKKLILVTGHRRESFGAGLEHICEALVTLAKRHTDVQIVYPVHLNPCVREPV HHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH SRLLSGVENIFLIEPQEYLSFVYLMERAYLILTDSGGIQEEAPALNKPVLVMRNATERPE HHHHHCCCCEEEECHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCC AVAAGTVRLVGTEAKSIVQEVSLLLTDKRIYRTMAQAKNPYAKENACRYIIDVLKQILN HHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]