Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is wzyE [H]
Identifier: 126209008
GI number: 126209008
Start: 1764715
End: 1766049
Strand: Reverse
Name: wzyE [H]
Synonym: APL_1544
Alternate gene names: 126209008
Gene position: 1766049-1764715 (Counterclockwise)
Preceding gene: 126209009
Following gene: 126209007
Centisome position: 77.65
GC content: 39.25
Gene sequence:
>1335_bases ATGATTGAATATACTTTATTAACCGGTTTTTATCTGCTCTCGGTATGGCTGATAGCGATTTATATTTATAGCGATTACCA AAAGCAGAGGTTTTCATTCCATTTACTGTTTAGCCTGATGTATCTGGTGATTTTTTATCTGGGCTTTCCGTTTTCAATGG CAATGGCATTAGGCTTTGATAGTCCGTTAGCCGAACCCGAAACGCTCTTTCTAACCCTTTTTGTGATGTTGGCGGGTTAT TTGATTTATTGGTTGAGTTACCGCTTTTTTACCGGAACAGTCAGTTTTCAGAAACCTCAAGCGGTTGAAAATATAAAAAA TTTTGCAAAAACAGAAGCAAATTTGACCGCTTGTTTCTTATTATTAATTGCTGCTGGTAGTTTGGTTTGGTTTGTTTCTC TTAACGGCTGGTTATTGTTTGAATTGGAAAAATACAGTCAAATTTTCTCGACGACGATTCAACACGTTTGGTTGAAACGC TTCTTCTATTTCTTTCTGCCGGCATTATTAATTTTATTTTTCCTATATCAAAATAAAAAAGTATGGGGGCTTTTTCTTAT ATTAGGCATTTTGCTCGGCGGTTTGCACTATATTGCGGTGGGCGGTACACGAGCGAATTTATCGATGGCGGTGCTATTGT TTTTCCTATTAGGGCTTTATAAAGATTATCTATCGTTTAAGGTGCTATTGATCGCCGGTTGTGCAATGGTCGGCGCCATG TTTTTATTGGCGTTAGCGCGTTACGGATTAAAGGTAAGCGGCTCGGAAGCATGGTTTACTTTTTTATATCTGACACGAGA TACGTTTTCCCCATGGGAAAACTTCGCCAAAATTTTAGACTATCCGGTTGAATTTCAAGGCTTAATGCCGATTGTTCGAG ATTTCTATGTTTATATTCCGGATTGGTTGTGGCAGGTAAAACCTCCTTATATCGTCAATACGGCAAATTATTTCACACGG GAGATGTTAGGCAATTTCTCGGGGTTAGCGATTTCACCGACGCTACTCGGCTCTTTCTATATTATGGGCGGATTGCCGAT GATAACTCTCGGTATGGCATTTGTCGGCGGGATTATTCAAAGTTTCGATCGTTTATTTAGTTATGCAACATATCATCAGG ACAAAAGTCATTCCGCTATTATTCAAGCGTATTGTCTGGCGAATCTGTTTAACTTAGTCGTATTGGTACGAGAGGGGATG GACGCCTTTGTTTCTCGGTGGATTTTCTTTAGCGTGATTTTCTTATTGTGTTGGTGCGTTGCCAAATTGATCGCGCTTAA TTTTGAGCCGCTATTATCGATGGAAAAGGTAGATAAAAATGATAGAAACGGTTGA
Upstream 100 bases:
>100_bases AGCAACAGCTGCAAAATTGCGATAAAAATAATATAGGATTTTTTGCTCCCCATTATAACGAACAATGGCTGACCTTATTA ACGGAACTCAGTAAATCATG
Downstream 100 bases:
>100_bases AATTCGAGGGATTAATATCCTGACGGCAAAAACTAAGACCGAGTTTGTCGATTTCTTAACGGATAAAGGGCAACTCAAAA CAGGCAAATTAATTGCAATG
Product: putative common antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MIEYTLLTGFYLLSVWLIAIYIYSDYQKQRFSFHLLFSLMYLVIFYLGFPFSMAMALGFDSPLAEPETLFLTLFVMLAGY LIYWLSYRFFTGTVSFQKPQAVENIKNFAKTEANLTACFLLLIAAGSLVWFVSLNGWLLFELEKYSQIFSTTIQHVWLKR FFYFFLPALLILFFLYQNKKVWGLFLILGILLGGLHYIAVGGTRANLSMAVLLFFLLGLYKDYLSFKVLLIAGCAMVGAM FLLALARYGLKVSGSEAWFTFLYLTRDTFSPWENFAKILDYPVEFQGLMPIVRDFYVYIPDWLWQVKPPYIVNTANYFTR EMLGNFSGLAISPTLLGSFYIMGGLPMITLGMAFVGGIIQSFDRLFSYATYHQDKSHSAIIQAYCLANLFNLVVLVREGM DAFVSRWIFFSVIFLLCWCVAKLIALNFEPLLSMEKVDKNDRNG
Sequences:
>Translated_444_residues MIEYTLLTGFYLLSVWLIAIYIYSDYQKQRFSFHLLFSLMYLVIFYLGFPFSMAMALGFDSPLAEPETLFLTLFVMLAGY LIYWLSYRFFTGTVSFQKPQAVENIKNFAKTEANLTACFLLLIAAGSLVWFVSLNGWLLFELEKYSQIFSTTIQHVWLKR FFYFFLPALLILFFLYQNKKVWGLFLILGILLGGLHYIAVGGTRANLSMAVLLFFLLGLYKDYLSFKVLLIAGCAMVGAM FLLALARYGLKVSGSEAWFTFLYLTRDTFSPWENFAKILDYPVEFQGLMPIVRDFYVYIPDWLWQVKPPYIVNTANYFTR EMLGNFSGLAISPTLLGSFYIMGGLPMITLGMAFVGGIIQSFDRLFSYATYHQDKSHSAIIQAYCLANLFNLVVLVREGM DAFVSRWIFFSVIFLLCWCVAKLIALNFEPLLSMEKVDKNDRNG >Mature_444_residues MIEYTLLTGFYLLSVWLIAIYIYSDYQKQRFSFHLLFSLMYLVIFYLGFPFSMAMALGFDSPLAEPETLFLTLFVMLAGY LIYWLSYRFFTGTVSFQKPQAVENIKNFAKTEANLTACFLLLIAAGSLVWFVSLNGWLLFELEKYSQIFSTTIQHVWLKR FFYFFLPALLILFFLYQNKKVWGLFLILGILLGGLHYIAVGGTRANLSMAVLLFFLLGLYKDYLSFKVLLIAGCAMVGAM FLLALARYGLKVSGSEAWFTFLYLTRDTFSPWENFAKILDYPVEFQGLMPIVRDFYVYIPDWLWQVKPPYIVNTANYFTR EMLGNFSGLAISPTLLGSFYIMGGLPMITLGMAFVGGIIQSFDRLFSYATYHQDKSHSAIIQAYCLANLFNLVVLVREGM DAFVSRWIFFSVIFLLCWCVAKLIALNFEPLLSMEKVDKNDRNG
Specific function: Could be involved in ECA polysaccharide chain elongation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the wzyE family [H]
Homologues:
Organism=Escherichia coli, GI2367288, Length=443, Percent_Identity=43.3408577878104, Blast_Score=322, Evalue=3e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010691 [H]
Pfam domain/function: PF06899 WzyE [H]
EC number: NA
Molecular weight: Translated: 51129; Mature: 51129
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00147 ARGINASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEYTLLTGFYLLSVWLIAIYIYSDYQKQRFSFHLLFSLMYLVIFYLGFPFSMAMALGFD CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC SPLAEPETLFLTLFVMLAGYLIYWLSYRFFTGTVSFQKPQAVENIKNFAKTEANLTACFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHH LLIAAGSLVWFVSLNGWLLFELEKYSQIFSTTIQHVWLKRFFYFFLPALLILFFLYQNKK HHHHHHHHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VWGLFLILGILLGGLHYIAVGGTRANLSMAVLLFFLLGLYKDYLSFKVLLIAGCAMVGAM HHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLALARYGLKVSGSEAWFTFLYLTRDTFSPWENFAKILDYPVEFQGLMPIVRDFYVYIP HHHHHHHCCCEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC DWLWQVKPPYIVNTANYFTREMLGNFSGLAISPTLLGSFYIMGGLPMITLGMAFVGGIIQ HHHHCCCCCEEEECHHHHHHHHHCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHH SFDRLFSYATYHQDKSHSAIIQAYCLANLFNLVVLVREGMDAFVSRWIFFSVIFLLCWCV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKLIALNFEPLLSMEKVDKNDRNG HHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MIEYTLLTGFYLLSVWLIAIYIYSDYQKQRFSFHLLFSLMYLVIFYLGFPFSMAMALGFD CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC SPLAEPETLFLTLFVMLAGYLIYWLSYRFFTGTVSFQKPQAVENIKNFAKTEANLTACFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHH LLIAAGSLVWFVSLNGWLLFELEKYSQIFSTTIQHVWLKRFFYFFLPALLILFFLYQNKK HHHHHHHHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VWGLFLILGILLGGLHYIAVGGTRANLSMAVLLFFLLGLYKDYLSFKVLLIAGCAMVGAM HHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLALARYGLKVSGSEAWFTFLYLTRDTFSPWENFAKILDYPVEFQGLMPIVRDFYVYIP HHHHHHHCCCEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC DWLWQVKPPYIVNTANYFTREMLGNFSGLAISPTLLGSFYIMGGLPMITLGMAFVGGIIQ HHHHCCCCCEEEECHHHHHHHHHCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHH SFDRLFSYATYHQDKSHSAIIQAYCLANLFNLVVLVREGMDAFVSRWIFFSVIFLLCWCV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKLIALNFEPLLSMEKVDKNDRNG HHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA