Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207997
Identifier: 126207997
GI number: 126207997
Start: 582220
End: 582747
Strand: Direct
Name: 126207997
Synonym: APL_0513
Alternate gene names: NA
Gene position: 582220-582747 (Clockwise)
Preceding gene: 126207996
Following gene: 126207998
Centisome position: 25.6
GC content: 42.05
Gene sequence:
>528_bases ATGAGCGTAAAAATTGATGGAATGGCGGAGATTTCCGCCAATATCGCCAAACTGACCAAGCAAAAGCTCCCCCAAGCCGC TAAAAAGTCGCTTAATACTTTAGCTCGGCGTGCGATGAAAGGAGCTACACAAACGGTAGCAAAAGAGATTGGCGTACCGC ACAAAACCATTCGCAACCGAGCCAAATTAACCAAACCTGCGGAAAAAACACGGCTGGAGGCACGGATAAAGGTTATTCGT TCCAATATGCCAGCTATTCGCCTGTTTGAAAACCGTTCTACTAAAATGTGGGTCGGACGTGGTGGCATTGTAGTAGGTAA ATATGCGATTAAACGAGGATTTAAACAAACGCTAAAAAATGGTCGAACACACCTAATGCAGCGTCAAGGTAAAGCTCGTT ACAGCATTGATGTAGTAAAAATTCCACTTTCACAACCATTAACACAGGCTTTCTCTCATGAATTGAAGGATTACCAACAA GATATTCAAAAAGAACTGACTAAGCAATTAAGTGAGGTATTTAAATGA
Upstream 100 bases:
>100_bases AGCCACGAACAGGCGATGAAGCGGTGCGAGAAGGTAAAGTGTTCTTCGTGAAATCATATTACCACCAAGACAATCTGCTT ATTCTTCGTTTGGAGTAGTA
Downstream 100 bases:
>100_bases TTATTCATAGCCAAATTCGAGAAGAAATTCTCGAATGTTTAAAACAAGCCTTACCCAATGAAATTAACTGGTATAACGGC AGACCATCCTTTATCGATAT
Product: putative phage tail component
Products: NA
Alternate protein names: Phage Tail Component; Prophage Minor Tail Protein Z; Tail Component Of Prophage; Prophage Minor Tail Z Family Protein; Bacteriophage Tail Protein; Minor Tail Protein Z Of Prophage; Gifsy-1 Prophagei VmtZ
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNRAKLTKPAEKTRLEARIKVIR SNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKNGRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQ DIQKELTKQLSEVFK
Sequences:
>Translated_175_residues MSVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNRAKLTKPAEKTRLEARIKVIR SNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKNGRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQ DIQKELTKQLSEVFK >Mature_174_residues SVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNRAKLTKPAEKTRLEARIKVIRS NMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKNGRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQD IQKELTKQLSEVFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19794; Mature: 19663
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AKLTKPAEKTRLEARIKVIRSNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKN HHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHHH GRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQDIQKELTKQLSEVFK HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVKIDGMAEISANIAKLTKQKLPQAAKKSLNTLARRAMKGATQTVAKEIGVPHKTIRNR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AKLTKPAEKTRLEARIKVIRSNMPAIRLFENRSTKMWVGRGGIVVGKYAIKRGFKQTLKN HHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHHH GRTHLMQRQGKARYSIDVVKIPLSQPLTQAFSHELKDYQQDIQKELTKQLSEVFK HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA