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The map label for this gene is ydfU [H]

Identifier: 126207986

GI number: 126207986

Start: 571412

End: 572434

Strand: Direct

Name: ydfU [H]

Synonym: APL_0502

Alternate gene names: 126207986

Gene position: 571412-572434 (Clockwise)

Preceding gene: 126207985

Following gene: 126207987

Centisome position: 25.12

GC content: 44.09

Gene sequence:

>1023_bases
ATGACTGAAGCATTATTACTCAAACCATACTTTCAGACCGAAGCCGGGATTGTGTTCTATCGGATTCCGCCAACGGTAAA
TAAGTTAGCGTTCGGTGAGCGTACTATTTTAATGCCGGCGACAGATAGCTTAAAAACGCAGCCGTCGGGAAAAATAGGAG
TTGCAAAAAATTTGCAGAATTCGACCGCTTGTCCACAACTAGCTGACTTTACGAAATCGGAATTAGTACGCAAAGCAGCG
GGCGGAGAAGCTGAATTATCAAAATGGGTACGCAAAATTGCAATTTGTCAGTGTAGAGACGGCGCTTATTGCCATAAAGA
AATGACGGTGACACGCACGGCAACAGGCTTTATCCGTACTTGCTGGCATCACGATGGTATAGCGCACCGGGGCGAAGCAA
GCGAGGAAGAGTTAAACGCATTGGCGGAAGCAAATTGGGTGCAGTTTATCGGTTATAAAATCCGCCAAGATTTACAAATG
CAGGCGGACGAATCGTTAAATTTAGGGTGCTTGTTAGCTTGGGCGATTGCAAAAAATTGTGTAAGTGCAATTGATGAATC
TGATTTGCGTAGATTGCTGAATTTGCCACAAAAAGAAGTGCCAGACCACCGAGAATCTACGACTTACGCAGCGGAGCAAG
CAGACCCGCATAAGATTTTCAAAACACTAGCGCAGCCGATTTTAAAGCTAAAAGCAGATCCTGAACCGCCGGCAAGTTTT
ATGGCGAAGCCGAAAGAAAAGCGATTTGAATCAAGCAAGTGGTTGCAGTTTGTGAAATCACAACCGTGTGTTTGTTGCGG
TAAACGAGCTGATGACCCACATCACATCATTGGGCAAGGGCGAGGCAAGATGGGAAGTAAAGAGCATGATTTATTCGTGA
TTCCGCTATGCCGAGTACATCACAACGAATTGCACTGTAATGCGCAGTTGTTCGAACAAAATTACGGTAAGCAAACGGAT
TTATTATTTAGATTTTTAGATAGAGCATTAAGTTTAGAGGCGTTGAGTGTTAATGACAGATAA

Upstream 100 bases:

>100_bases
GGACACCTAATTGAGCCGAAGCCATTCCCACAAGCAAGCGATGGCTGCTCACTGAATCGAACGAAGAGCTGCGGTTATTT
CGGTATATGGGAATTAACAA

Downstream 100 bases:

>100_bases
AGATATTTTTATTGGCGGTTGTTTTTTAGTAAGTGTGTTTTGTGCGTTGATCAGTATTACGTGGGGTAAAAATGAGTGAT
TATTTAGAAATCGCATTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTEALLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQNSTACPQLADFTKSELVRKAA
GGEAELSKWVRKIAICQCRDGAYCHKEMTVTRTATGFIRTCWHHDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQM
QADESLNLGCLLAWAIAKNCVSAIDESDLRRLLNLPQKEVPDHRESTTYAAEQADPHKIFKTLAQPILKLKADPEPPASF
MAKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMGSKEHDLFVIPLCRVHHNELHCNAQLFEQNYGKQTD
LLFRFLDRALSLEALSVNDR

Sequences:

>Translated_340_residues
MTEALLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQNSTACPQLADFTKSELVRKAA
GGEAELSKWVRKIAICQCRDGAYCHKEMTVTRTATGFIRTCWHHDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQM
QADESLNLGCLLAWAIAKNCVSAIDESDLRRLLNLPQKEVPDHRESTTYAAEQADPHKIFKTLAQPILKLKADPEPPASF
MAKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMGSKEHDLFVIPLCRVHHNELHCNAQLFEQNYGKQTD
LLFRFLDRALSLEALSVNDR
>Mature_339_residues
TEALLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQNSTACPQLADFTKSELVRKAAG
GEAELSKWVRKIAICQCRDGAYCHKEMTVTRTATGFIRTCWHHDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQMQ
ADESLNLGCLLAWAIAKNCVSAIDESDLRRLLNLPQKEVPDHRESTTYAAEQADPHKIFKTLAQPILKLKADPEPPASFM
AKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMGSKEHDLFVIPLCRVHHNELHCNAQLFEQNYGKQTDL
LFRFLDRALSLEALSVNDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510943, Length=353, Percent_Identity=35.6940509915014, Blast_Score=217, Evalue=9e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010373
- InterPro:   IPR003615 [H]

Pfam domain/function: PF06147 DUF968 [H]

EC number: NA

Molecular weight: Translated: 38256; Mature: 38125

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEALLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQN
CCCCEEECCCCCCCCCEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCC
STACPQLADFTKSELVRKAAGGEAELSKWVRKIAICQCRDGAYCHKEMTVTRTATGFIRT
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCEEEEHHHHHHHHH
CWHHDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQMQADESLNLGCLLAWAIAKNC
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VSAIDESDLRRLLNLPQKEVPDHRESTTYAAEQADPHKIFKTLAQPILKLKADPEPPASF
HHHHCHHHHHHHHCCCHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHH
MAKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMGSKEHDLFVIPLCRVH
HCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCEEEEEHHHHC
HNELHCNAQLFEQNYGKQTDLLFRFLDRALSLEALSVNDR
CCHHCCHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCC
>Mature Secondary Structure 
TEALLLKPYFQTEAGIVFYRIPPTVNKLAFGERTILMPATDSLKTQPSGKIGVAKNLQN
CCCEEECCCCCCCCCEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCC
STACPQLADFTKSELVRKAAGGEAELSKWVRKIAICQCRDGAYCHKEMTVTRTATGFIRT
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCEEEEHHHHHHHHH
CWHHDGIAHRGEASEEELNALAEANWVQFIGYKIRQDLQMQADESLNLGCLLAWAIAKNC
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VSAIDESDLRRLLNLPQKEVPDHRESTTYAAEQADPHKIFKTLAQPILKLKADPEPPASF
HHHHCHHHHHHHHCCCHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHH
MAKPKEKRFESSKWLQFVKSQPCVCCGKRADDPHHIIGQGRGKMGSKEHDLFVIPLCRVH
HCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCEEEEEHHHHC
HNELHCNAQLFEQNYGKQTDLLFRFLDRALSLEALSVNDR
CCHHCCHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]