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The map label for this gene is yhiR [C]

Identifier: 126207801

GI number: 126207801

Start: 353973

End: 354815

Strand: Direct

Name: yhiR [C]

Synonym: APL_0317

Alternate gene names: 126207801

Gene position: 353973-354815 (Clockwise)

Preceding gene: 126207799

Following gene: 126207802

Centisome position: 15.56

GC content: 44.37

Gene sequence:

>843_bases
ATGCTCAGCTATCGCCATAGTTTCCATGCCGGCAATCATGCGGATGTGGTAAAACATATTGTTCAGCTTTTGATTTTACA
ATCATTAAAACAGAAAGATAAAGGCTTTCTTTATTTGGATACGCATTCCGGTGTCGGGCGTTATAGCTTATTAAGCGCGG
AATCGGAGAAAACCGGCGAATATCTGGAAGGTGTTGCCCGTTTGTGGGAGCGAACGGATTTGCCGGAAGAAGTCGCGTTA
TACATTAATGAACTGAAAAAAATTAATAAAGGCGAGAAATTGCGCTATTACGCCGGCTCGCCGTTATTGGCGGTTAATCA
GTTACGTCCGCAAGATCGTGCGATTTTAACCGAATTACATCCGAACGATTTCCCGTTATTACGCCAAGAGTTTGCGAAGA
AAGATAATGTCGTTACCAAGCGTGAAAACGGTTTTCAGCAATTAAAATCCGCATTACCGCCGAAAGAGCGTCGTGGTTTT
GTGTTAATCGATCCGCCGTACGAATTAAAAGAAGATTATGAATTGGTGGTGAAAGCGATAGAGGAAGGCTATAAACGTTT
TGCCACGGGTATTTATGCGATTTGGTATCCGGTGGTATTACGCCAGCACACTAAACGTATTGTACGCGGTTTGGCGGATA
GCGGTATTCGTAAAATTTTACAAATTGAATTGGCGGTACGTCCGGATTCCGATCAACGTGGTATGACGGCAAGCGGTATG
ATTGTGATTAATCCGCCTTGGCAATTAGAAAGCCAGATGAAAAAAGTGCTTCCGTATCTTGCCGAAGTGCTGGTTCCGGA
AGGAACGGCATCTTGGACGGTGAGTTGGATCACGCCGGAATAA

Upstream 100 bases:

>100_bases
TTGAGCCGGTGAATGATAACTTATGCTATTTTCCGTGTTTTCCGCTTTGTTCCGTGTTAAAATCACAATTCATAACATAT
TGAAAAAATAGAGAGAATTT

Downstream 100 bases:

>100_bases
TTTGATTAGCCGCAGATAACGCAGATAAACGGAAGTTTCCGTGAAAATTGGTGTTGTCTGTGGTTTTTTTTATATAAGGA
AACAATATGGAACAATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLSYRHSFHAGNHADVVKHIVQLLILQSLKQKDKGFLYLDTHSGVGRYSLLSAESEKTGEYLEGVARLWERTDLPEEVAL
YINELKKINKGEKLRYYAGSPLLAVNQLRPQDRAILTELHPNDFPLLRQEFAKKDNVVTKRENGFQQLKSALPPKERRGF
VLIDPPYELKEDYELVVKAIEEGYKRFATGIYAIWYPVVLRQHTKRIVRGLADSGIRKILQIELAVRPDSDQRGMTASGM
IVINPPWQLESQMKKVLPYLAEVLVPEGTASWTVSWITPE

Sequences:

>Translated_280_residues
MLSYRHSFHAGNHADVVKHIVQLLILQSLKQKDKGFLYLDTHSGVGRYSLLSAESEKTGEYLEGVARLWERTDLPEEVAL
YINELKKINKGEKLRYYAGSPLLAVNQLRPQDRAILTELHPNDFPLLRQEFAKKDNVVTKRENGFQQLKSALPPKERRGF
VLIDPPYELKEDYELVVKAIEEGYKRFATGIYAIWYPVVLRQHTKRIVRGLADSGIRKILQIELAVRPDSDQRGMTASGM
IVINPPWQLESQMKKVLPYLAEVLVPEGTASWTVSWITPE
>Mature_280_residues
MLSYRHSFHAGNHADVVKHIVQLLILQSLKQKDKGFLYLDTHSGVGRYSLLSAESEKTGEYLEGVARLWERTDLPEEVAL
YINELKKINKGEKLRYYAGSPLLAVNQLRPQDRAILTELHPNDFPLLRQEFAKKDNVVTKRENGFQQLKSALPPKERRGF
VLIDPPYELKEDYELVVKAIEEGYKRFATGIYAIWYPVVLRQHTKRIVRGLADSGIRKILQIELAVRPDSDQRGMTASGM
IVINPPWQLESQMKKVLPYLAEVLVPEGTASWTVSWITPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=66.7857142857143, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32092; Mature: 32092

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVVKHIVQLLILQSLKQKDKGFLYLDTHSGVGRYSLLSAESEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCHHHHH
YLEGVARLWERTDLPEEVALYINELKKINKGEKLRYYAGSPLLAVNQLRPQDRAILTELH
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHCCCCCHHHHHHHCC
PNDFPLLRQEFAKKDNVVTKRENGFQQLKSALPPKERRGFVLIDPPYELKEDYELVVKAI
CCCCHHHHHHHHHHCCCEECHHHHHHHHHHCCCCHHHCCEEEECCCHHHHHHHHHHHHHH
EEGYKRFATGIYAIWYPVVLRQHTKRIVRGLADSGIRKILQIELAVRPDSDQRGMTASGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEECCE
IVINPPWQLESQMKKVLPYLAEVLVPEGTASWTVSWITPE
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVVKHIVQLLILQSLKQKDKGFLYLDTHSGVGRYSLLSAESEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCHHHHH
YLEGVARLWERTDLPEEVALYINELKKINKGEKLRYYAGSPLLAVNQLRPQDRAILTELH
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHCCCCCHHHHHHHCC
PNDFPLLRQEFAKKDNVVTKRENGFQQLKSALPPKERRGFVLIDPPYELKEDYELVVKAI
CCCCHHHHHHHHHHCCCEECHHHHHHHHHHCCCCHHHCCEEEECCCHHHHHHHHHHHHHH
EEGYKRFATGIYAIWYPVVLRQHTKRIVRGLADSGIRKILQIELAVRPDSDQRGMTASGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEECCE
IVINPPWQLESQMKKVLPYLAEVLVPEGTASWTVSWITPE
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]