Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is yeaK [H]
Identifier: 126207758
GI number: 126207758
Start: 298665
End: 299156
Strand: Direct
Name: yeaK [H]
Synonym: APL_0270
Alternate gene names: 126207758
Gene position: 298665-299156 (Clockwise)
Preceding gene: 126207757
Following gene: 126207763
Centisome position: 13.13
GC content: 41.46
Gene sequence:
>492_bases ATGTCGGAAAAAACATTCGAAAATTTGACCGCACTTTTAGACCAATATCAAGCTCGTTATCGAGTAGTCCATCATACTAG TGCCGGTAAATCGGAAGAAGTGGCGAAAATTCGTGGTACGGAAATCGGGCAAGGGGCAAAAGCCTTGGTGTGTAAAATCA AAGGAAATGGTATAAAACAAGCGGTACTGGCTATTTTACCAGCCGATGAGCAGGCGGATTTAAATCAAATCGCCCAATAC TTAGGCGGTACAAAGGCGTCTCTTGCCAGCCCTAAAGAAGTTGATGAACTTACGGATTGTGTATTTGGTGCGATTCCACC TTTTAGCTTTCATCCGGATCTTAAACTTATTGCAGATCCTAGTTTACTTGAACGCTACGATGAGATTGCTTTTAACGCCG GCACATTAGAACGTTCAATTATTTTAAATACGCAAGATTATGCACGTATTGTGCAGCCGACATTAGTCTGTTTTGTGAAA AGAGAGATATAG
Upstream 100 bases:
>100_bases CTTATCTTCACTACTGTGAGCTATATGGTGCAGTAGAAGAATGCTTAATTACGATATGTGGTGCCGGACTGAAATCAGAC CATTAACTAAGGGAAATAAT
Downstream 100 bases:
>100_bases AAGCCACTCGGTTTTAGATTAAATTTAATCGCTTTTATGTAACTAATTACATAATGTTAAAAAATACGAAAAAAAGACCG CTTGTTTTTGGCGGTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSEKTFENLTALLDQYQARYRVVHHTSAGKSEEVAKIRGTEIGQGAKALVCKIKGNGIKQAVLAILPADEQADLNQIAQY LGGTKASLASPKEVDELTDCVFGAIPPFSFHPDLKLIADPSLLERYDEIAFNAGTLERSIILNTQDYARIVQPTLVCFVK REI
Sequences:
>Translated_163_residues MSEKTFENLTALLDQYQARYRVVHHTSAGKSEEVAKIRGTEIGQGAKALVCKIKGNGIKQAVLAILPADEQADLNQIAQY LGGTKASLASPKEVDELTDCVFGAIPPFSFHPDLKLIADPSLLERYDEIAFNAGTLERSIILNTQDYARIVQPTLVCFVK REI >Mature_162_residues SEKTFENLTALLDQYQARYRVVHHTSAGKSEEVAKIRGTEIGQGAKALVCKIKGNGIKQAVLAILPADEQADLNQIAQYL GGTKASLASPKEVDELTDCVFGAIPPFSFHPDLKLIADPSLLERYDEIAFNAGTLERSIILNTQDYARIVQPTLVCFVKR EI
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788087, Length=154, Percent_Identity=68.1818181818182, Blast_Score=221, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007214 [H]
Pfam domain/function: PF04073 YbaK [H]
EC number: NA
Molecular weight: Translated: 17904; Mature: 17773
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKTFENLTALLDQYQARYRVVHHTSAGKSEEVAKIRGTEIGQGAKALVCKIKGNGIKQ CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCHHH AVLAILPADEQADLNQIAQYLGGTKASLASPKEVDELTDCVFGAIPPFSFHPDLKLIADP HHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECH SLLERYDEIAFNAGTLERSIILNTQDYARIVQPTLVCFVKREI HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEKTFENLTALLDQYQARYRVVHHTSAGKSEEVAKIRGTEIGQGAKALVCKIKGNGIKQ CCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCHHH AVLAILPADEQADLNQIAQYLGGTKASLASPKEVDELTDCVFGAIPPFSFHPDLKLIADP HHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECH SLLERYDEIAFNAGTLERSIILNTQDYARIVQPTLVCFVKREI HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]