Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
---|---|
Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is gpmB [H]
Identifier: 126207718
GI number: 126207718
Start: 249991
End: 250623
Strand: Direct
Name: gpmB [H]
Synonym: APL_0230
Alternate gene names: 126207718
Gene position: 249991-250623 (Clockwise)
Preceding gene: 126207715
Following gene: 126207723
Centisome position: 10.99
GC content: 41.86
Gene sequence:
>633_bases ATGGCACTCAACATTTATTTAGTCCGCCACGGGAAAACCGTCTGGAATTTGGAAGGGCGTTTGCAAGGCTCCGGCGATTC ACCTTTGGTTGAAGAAGGTATTGAAGGGGCAAAAAAAGTGGGGAGAGCGTTAAAAGCGGTTAAATTTGCCGCCGCTTATT CCAGTATGCAAAAACGAGCGCAAGATACCGCAAATTATATTTTGGCGGAAAATAATGATAAGAACATTCCGCACTTTCAC CACTTCGGTTTGAACGAGTTCGATTTTGGGCTTTGGGAAGGTACGAAATCGGTAGATTTATACTCAAATGATGAATATTG GACGATGAAAAAAACACCGGCGGAATATCGTGCGGAAACGAATGGCGGTGAAACTTATGAAGATCTTTATAGCCGTGTGA TTAAAGTGTTTAATCAAATTGCACAGTTACATCAAGATAATGAAAACATATTAATTGTTGCACATGGTATGACATTAACT GTTCTCACAGCGGTATTACGAGGCTTGCATTGGTCGGAATGTCGTGACGAAACTAAACACAGTTTTGTGATTAACACCGC GATAAACCGAGCGGTTGTAGAGAAGGGTAAGGCTGAATTAGTTGAGTTTAACCGCACGGAACATTTGGCTTAG
Upstream 100 bases:
>100_bases AATCACAACAAAGTCGTGATGTTGGAAGCAAATAGTCAATTTTTCAGTCATTTTTTGCTATACTCCGATAAATTTTGTCT ATTTTAACAGGGAATTGAAT
Downstream 100 bases:
>100_bases ATTTGCAAAAAATCCAAAAATTAGACCGCTTATTTGCGTTGTTCAAATTAGCGGTCTTATTCTTTTTTATTGGGCTTCAA ACCAGCTTTCTAAAATTAAA
Product: phosphoglycerate mutase/fructose-2, 6-bisphosphatase
Products: NA
Alternate protein names: BPG-dependent PGAM 2; PGAM 2; Phosphoglyceromutase 2; dPGM 2 [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MALNIYLVRHGKTVWNLEGRLQGSGDSPLVEEGIEGAKKVGRALKAVKFAAAYSSMQKRAQDTANYILAENNDKNIPHFH HFGLNEFDFGLWEGTKSVDLYSNDEYWTMKKTPAEYRAETNGGETYEDLYSRVIKVFNQIAQLHQDNENILIVAHGMTLT VLTAVLRGLHWSECRDETKHSFVINTAINRAVVEKGKAELVEFNRTEHLA
Sequences:
>Translated_210_residues MALNIYLVRHGKTVWNLEGRLQGSGDSPLVEEGIEGAKKVGRALKAVKFAAAYSSMQKRAQDTANYILAENNDKNIPHFH HFGLNEFDFGLWEGTKSVDLYSNDEYWTMKKTPAEYRAETNGGETYEDLYSRVIKVFNQIAQLHQDNENILIVAHGMTLT VLTAVLRGLHWSECRDETKHSFVINTAINRAVVEKGKAELVEFNRTEHLA >Mature_209_residues ALNIYLVRHGKTVWNLEGRLQGSGDSPLVEEGIEGAKKVGRALKAVKFAAAYSSMQKRAQDTANYILAENNDKNIPHFHH FGLNEFDFGLWEGTKSVDLYSNDEYWTMKKTPAEYRAETNGGETYEDLYSRVIKVFNQIAQLHQDNENILIVAHGMTLTV LTAVLRGLHWSECRDETKHSFVINTAINRAVVEKGKAELVEFNRTEHLA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786857, Length=168, Percent_Identity=32.1428571428571, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1790856, Length=174, Percent_Identity=31.6091954022989, Blast_Score=75, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324857, Length=191, Percent_Identity=25.6544502617801, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 23798; Mature: 23667
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNIYLVRHGKTVWNLEGRLQGSGDSPLVEEGIEGAKKVGRALKAVKFAAAYSSMQKRA CEEEEEEEECCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDTANYILAENNDKNIPHFHHFGLNEFDFGLWEGTKSVDLYSNDEYWTMKKTPAEYRAET HHHHCEEEECCCCCCCCCEEECCCCCCCCHHCCCCCCEEEECCCCEEEEECCCHHHHCCC NGGETYEDLYSRVIKVFNQIAQLHQDNENILIVAHGMTLTVLTAVLRGLHWSECRDETKH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHH SFVINTAINRAVVEKGKAELVEFNRTEHLA EEEEHHHHHHHHHHCCHHHHHHCCCCCCCC >Mature Secondary Structure ALNIYLVRHGKTVWNLEGRLQGSGDSPLVEEGIEGAKKVGRALKAVKFAAAYSSMQKRA EEEEEEEECCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDTANYILAENNDKNIPHFHHFGLNEFDFGLWEGTKSVDLYSNDEYWTMKKTPAEYRAET HHHHCEEEECCCCCCCCCEEECCCCCCCCHHCCCCCCEEEECCCCEEEEECCCHHHHCCC NGGETYEDLYSRVIKVFNQIAQLHQDNENILIVAHGMTLTVLTAVLRGLHWSECRDETKH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHH SFVINTAINRAVVEKGKAELVEFNRTEHLA EEEEHHHHHHHHHHCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]