| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126207668
Identifier: 126207668
GI number: 126207668
Start: 199236
End: 200000
Strand: Reverse
Name: 126207668
Synonym: APL_0180
Alternate gene names: NA
Gene position: 200000-199236 (Counterclockwise)
Preceding gene: 126207671
Following gene: 126207667
Centisome position: 8.79
GC content: 39.35
Gene sequence:
>765_bases ATGGTATTAATGCTGTTTGTGCAAATGTCGCTTAATCACTATTTCGCACCGCAAAATTCCATTTTTATTTCCCCCTATTT ACTTGCTTTTTTCGTGACTAATCTGATTATCTTTTTTGTGTTATGGAAAGGCGAAATCTGCCCGGGACAAACCGACAGAT TATTATTTGTCTTGAAATTCTTTATGGTATTTTCTCTCGGCAATTTTATTTATTCCGTCGGCTTTACGCCGAAACATAAC CCGATGGCGCTTGCCGGTGTCGCATCATTAATGTTAGGGCTTTTCTATTGGTTGTTTACCGCTCGTGAAAAACCGCTAAA CGTCTTGATTTACTGCGCTTTCGGGATTCTGGCGGTCGGTATGATTCAGTATTTAGCCATTTACTGGATTGAACTTCCGT CTTTGTTTAACGGGATTCGAGCGAATAATTTCGCTCAACTGTTACTCGGTATTTTACTTGCCGGTTGGTATTTAATGTTG GCGAAAAGTCGTCTTGACGTCTTTTTTAAATTATTAGTACAGCTTGCACTTATCGTATTGGTATTCAATTATTTGTGGAG TGCTTTCGTACTTTACCAACAATTGCAAATTATGCCGGATATGGCGTTATTGCCTTATGCGCTTTATTTTATCGTGCAAT TTGTGATTTTCGCATTGCTCGCTTGGCTATTACTCGGCAAAGGCGAAAAACAGATTAAAAACCCGCTCGGTTGGACGTTA GCCACTTTATTGGCAATGCTCTATCCGTTCACTAATATGATCTAA
Upstream 100 bases:
>100_bases CATCAAAATCATTTTCCAATTTAACTTATCCGTTTAATTTATGTCACACGATCACAATTCCGAAAAAAAATATGAGGTTG CCACACACGCACTTTTACCA
Downstream 100 bases:
>100_bases TGCTAAAACGTAGCTTACTTGTTATAGGGACTTTGGTTGCACTGCTGATTGTCGGCGGTGCAACGCTGTTTTCAGGTAAG CAACTTGCAACGGTAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MVLMLFVQMSLNHYFAPQNSIFISPYLLAFFVTNLIIFFVLWKGEICPGQTDRLLFVLKFFMVFSLGNFIYSVGFTPKHN PMALAGVASLMLGLFYWLFTAREKPLNVLIYCAFGILAVGMIQYLAIYWIELPSLFNGIRANNFAQLLLGILLAGWYLML AKSRLDVFFKLLVQLALIVLVFNYLWSAFVLYQQLQIMPDMALLPYALYFIVQFVIFALLAWLLLGKGEKQIKNPLGWTL ATLLAMLYPFTNMI
Sequences:
>Translated_254_residues MVLMLFVQMSLNHYFAPQNSIFISPYLLAFFVTNLIIFFVLWKGEICPGQTDRLLFVLKFFMVFSLGNFIYSVGFTPKHN PMALAGVASLMLGLFYWLFTAREKPLNVLIYCAFGILAVGMIQYLAIYWIELPSLFNGIRANNFAQLLLGILLAGWYLML AKSRLDVFFKLLVQLALIVLVFNYLWSAFVLYQQLQIMPDMALLPYALYFIVQFVIFALLAWLLLGKGEKQIKNPLGWTL ATLLAMLYPFTNMI >Mature_254_residues MVLMLFVQMSLNHYFAPQNSIFISPYLLAFFVTNLIIFFVLWKGEICPGQTDRLLFVLKFFMVFSLGNFIYSVGFTPKHN PMALAGVASLMLGLFYWLFTAREKPLNVLIYCAFGILAVGMIQYLAIYWIELPSLFNGIRANNFAQLLLGILLAGWYLML AKSRLDVFFKLLVQLALIVLVFNYLWSAFVLYQQLQIMPDMALLPYALYFIVQFVIFALLAWLLLGKGEKQIKNPLGWTL ATLLAMLYPFTNMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29201; Mature: 29201
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMLFVQMSLNHYFAPQNSIFISPYLLAFFVTNLIIFFVLWKGEICPGQTDRLLFVLKF CHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FMVFSLGNFIYSVGFTPKHNPMALAGVASLMLGLFYWLFTAREKPLNVLIYCAFGILAVG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MIQYLAIYWIELPSLFNGIRANNFAQLLLGILLAGWYLMLAKSRLDVFFKLLVQLALIVL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFNYLWSAFVLYQQLQIMPDMALLPYALYFIVQFVIFALLAWLLLGKGEKQIKNPLGWTL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH ATLLAMLYPFTNMI HHHHHHHHHHHCCC >Mature Secondary Structure MVLMLFVQMSLNHYFAPQNSIFISPYLLAFFVTNLIIFFVLWKGEICPGQTDRLLFVLKF CHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FMVFSLGNFIYSVGFTPKHNPMALAGVASLMLGLFYWLFTAREKPLNVLIYCAFGILAVG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MIQYLAIYWIELPSLFNGIRANNFAQLLLGILLAGWYLMLAKSRLDVFFKLLVQLALIVL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFNYLWSAFVLYQQLQIMPDMALLPYALYFIVQFVIFALLAWLLLGKGEKQIKNPLGWTL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH ATLLAMLYPFTNMI HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA