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The map label for this gene is yiiR [H]

Identifier: 126207583

GI number: 126207583

Start: 100684

End: 101100

Strand: Reverse

Name: yiiR [H]

Synonym: APL_0095

Alternate gene names: 126207583

Gene position: 101100-100684 (Counterclockwise)

Preceding gene: 126207584

Following gene: 126207582

Centisome position: 4.44

GC content: 43.17

Gene sequence:

>417_bases
ATGATTTGGTATAAGGCACTGTTTTCGTTTCAAGGGCGGCTTAACCGCCAAGGCTTTTGGATCGGCTTTGCGATTAACTT
TATTTTCTTATTTATGGTTGCAAATTTTTGGTTAAATGCGACCGATTTCAATCTGATCAGTTTGCTTCCGCTTGCATTAT
CGCTATACAGTTTATCTGCGGTGATTATTAAACGCCTACACGATCGTAACCGCTCCGGTAAAGCGGTTATCATGGCATTT
GTGCCGGTTGTGTGCTATGGTGTGTCGCTTTCCGCGCAAGACACAATACAATGGCTACTGGGGATAATGATGCCGATGTT
TATCGGTACGATGTTGTTGCTGGAATGGGGTGTATTTAGAGGTAACCCGCAGGCAAATCAGTATGGGGAAAAGGGGTTAA
GTATAAAACTTAGATAG

Upstream 100 bases:

>100_bases
GCCACCTTGGGTTTAATGGTGGGATTTGTAATTATGATGGTATTAGATGTGGCTTTAGGCTAAGCTACCGAACATAACGC
TTCATCTAAAAAGGATTGAT

Downstream 100 bases:

>100_bases
CTTAACCTAGCACTATAAATCATATTAGGTTAATTTTTATATGTTACTTTTCTTTGCGTTGCCAAAGAAAAGTAACCAAA
AGAAAGGCAACCCTACTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MIWYKALFSFQGRLNRQGFWIGFAINFIFLFMVANFWLNATDFNLISLLPLALSLYSLSAVIIKRLHDRNRSGKAVIMAF
VPVVCYGVSLSAQDTIQWLLGIMMPMFIGTMLLLEWGVFRGNPQANQYGEKGLSIKLR

Sequences:

>Translated_138_residues
MIWYKALFSFQGRLNRQGFWIGFAINFIFLFMVANFWLNATDFNLISLLPLALSLYSLSAVIIKRLHDRNRSGKAVIMAF
VPVVCYGVSLSAQDTIQWLLGIMMPMFIGTMLLLEWGVFRGNPQANQYGEKGLSIKLR
>Mature_138_residues
MIWYKALFSFQGRLNRQGFWIGFAINFIFLFMVANFWLNATDFNLISLLPLALSLYSLSAVIIKRLHDRNRSGKAVIMAF
VPVVCYGVSLSAQDTIQWLLGIMMPMFIGTMLLLEWGVFRGNPQANQYGEKGLSIKLR

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790355, Length=136, Percent_Identity=33.8235294117647, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008523 [H]

Pfam domain/function: PF05656 DUF805 [H]

EC number: NA

Molecular weight: Translated: 15774; Mature: 15774

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWYKALFSFQGRLNRQGFWIGFAINFIFLFMVANFWLNATDFNLISLLPLALSLYSLSA
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VIIKRLHDRNRSGKAVIMAFVPVVCYGVSLSAQDTIQWLLGIMMPMFIGTMLLLEWGVFR
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNPQANQYGEKGLSIKLR
CCCCCCHHCCCCCEEEEC
>Mature Secondary Structure
MIWYKALFSFQGRLNRQGFWIGFAINFIFLFMVANFWLNATDFNLISLLPLALSLYSLSA
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VIIKRLHDRNRSGKAVIMAFVPVVCYGVSLSAQDTIQWLLGIMMPMFIGTMLLLEWGVFR
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNPQANQYGEKGLSIKLR
CCCCCCHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]