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The map label for this gene is sirA

Identifier: 126207580

GI number: 126207580

Start: 99038

End: 99277

Strand: Direct

Name: sirA

Synonym: APL_0092

Alternate gene names: 126207580

Gene position: 99038-99277 (Clockwise)

Preceding gene: 126207574

Following gene: 126207588

Centisome position: 4.35

GC content: 42.5

Gene sequence:

>240_bases
ATGACAGATATAAAAATTGACCAAACACTAGATACACTTGGGCTACGTTGTCCGGAGCCGGTAATGCTTACACGCAAAAC
CATTCGCAATATGGCGGAAGGTGAGGTGTTATTAATTGTGGCGGATGATCCTGCCACTACGAGAGATATTTCGAGCTTCT
GCGAATTTATGGATCACCAATTGCTAAATAGCGAAACGGAAAATACCCCGTATCGTTATTGGGTCAAAAAAGGGCTTTAA

Upstream 100 bases:

>100_bases
CTGAGAAAATTAGTTTCTAAAATCGTTTGAACGACTTGTTGTAGTCGCTTGATATGTTGTGTAAATAATTGTTTCATAAG
ATAAAAAATAAGAGAAAAAT

Downstream 100 bases:

>100_bases
GCACAATAAAATAATCCCCCACACAAATGTATGGGGGATTTTTTAACTATTAGTGACGTGTAATTTCTTCTTGGTCAAAC
TCGAAATCTTCATCTTGGTC

Product: sulfur transfer protein SirA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MTDIKIDQTLDTLGLRCPEPVMLTRKTIRNMAEGEVLLIVADDPATTRDISSFCEFMDHQLLNSETENTPYRYWVKKGL

Sequences:

>Translated_79_residues
MTDIKIDQTLDTLGLRCPEPVMLTRKTIRNMAEGEVLLIVADDPATTRDISSFCEFMDHQLLNSETENTPYRYWVKKGL
>Mature_78_residues
TDIKIDQTLDTLGLRCPEPVMLTRKTIRNMAEGEVLLIVADDPATTRDISSFCEFMDHQLLNSETENTPYRYWVKKGL

Specific function: Could be part of a sulfur-relay system

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family. TusA subfamily

Homologues:

Organism=Escherichia coli, GI1789881, Length=80, Percent_Identity=65, Blast_Score=114, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TUSA_ACTP2 (A3MYG4)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001052805.1
- ProteinModelPortal:   A3MYG4
- SMR:   A3MYG4
- STRING:   A3MYG4
- GeneID:   4850253
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_0092
- eggNOG:   COG0425
- HOGENOM:   HBG731190
- OMA:   PEPVMLV
- PhylomeDB:   A3MYG4
- ProtClustDB:   PRK00299
- BioCyc:   APLE416269:APL_0092-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00413
- InterPro:   IPR001455
- InterPro:   IPR022931
- Gene3D:   G3DSA:3.30.110.40

Pfam domain/function: PF01206 SirA; SSF64307 SirA_like

EC number: NA

Molecular weight: Translated: 9091; Mature: 8959

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS01148 UPF0033

Important sites: ACT_SITE 17-17

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIKIDQTLDTLGLRCPEPVMLTRKTIRNMAEGEVLLIVADDPATTRDISSFCEFMDHQ
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
LLNSETENTPYRYWVKKGL
HHCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
TDIKIDQTLDTLGLRCPEPVMLTRKTIRNMAEGEVLLIVADDPATTRDISSFCEFMDHQ
CCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
LLNSETENTPYRYWVKKGL
HHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA