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The map label for this gene is yicC [C]

Identifier: 126207544

GI number: 126207544

Start: 62044

End: 62907

Strand: Direct

Name: yicC [C]

Synonym: APL_0056

Alternate gene names: 126207544

Gene position: 62044-62907 (Clockwise)

Preceding gene: 126207542

Following gene: 126207545

Centisome position: 2.73

GC content: 41.2

Gene sequence:

>864_bases
ATGATTTACAGTATGACCGCTTTCGCCCATTTAGAAATTAAAAAAGAGTGGGGTAATGCCGTGTGGGAAATCCGCTCGGT
TAATCAACGTTTTTTAGAGACCTATTTTCGTTTACCGGAGCAATTCCGTAATTTAGAAATGACCTTACGCGAGCGTTTAC
GTGCATCACTTACACGCGGAAAAGTAGAATGTAGTTTACGTATCGAATTAAGCAATAACCAAAATAGTGAATTGGCATTA
AATAAAGCGTATGCGGAAAAGGTAATCAGCTCATTACAAACCTTGCGAGGCATTGCTGGTGAGGGTGAGATCAACTTAGT
GGATATTTTACGTTATCCGGGGGTGGTTGATGCTCAAACACAAGATTTGGATCAAATCGGGCAAGACCTGTTAGCCGGTT
TCGAACAAATTTTAGCGGACTTTATTGCGATGCGTGGTCGTGAAGGTGCCAATTTACAAGCATTGATCCAACAGCGATTA
GATACGATTGCCGAGATCGCAACCAAAGTACAAGCGCAAATGCCGGAAATTCTGCAATGGCAGAAAGATAAATTACAACA
ACGTTTTGATGAGCTGAATTTGCAATTAGATCCGCAACGTTTAGAGCAAGAAATGGTGTTAACCGCACAGCGTGTGGATG
TGGCGGAAGAATTAGACCGCTTGCAATTACACGTGAAAGAAACGACTAACGTCTTGAAAAAAGGCGGAGCGGTAGGTCGT
AAATTGGACTTTATGATGCAAGAGCTAAATCGTGAATCCAATACGTTGGCATCAAAATCTATTAATGCGGACGTAACCAA
TTCAGCGGTTGAATTAAAAGTATTAATCGAACAAATGCGTGAGCAAATTCAGAATTTAGAGTAG

Upstream 100 bases:

>100_bases
TTGAAGGACTGCAAGCGGTTAAATTTTCCGAAAATTTTGCAAAAATCTTTCCGTGTTTTTCAGTGATATTCCGAGGTTAA
TTAACAAGAAGGAACACAAA

Downstream 100 bases:

>100_bases
GTGTTTTTATGACGTGTGAATGTAGCAAAATCAGTAATAGCCATCCAAATCTCTGCGTGCAACTTTCTCAGTATCGTTTA
ATTGAAATTGCAGGTGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIYSMTAFAHLEIKKEWGNAVWEIRSVNQRFLETYFRLPEQFRNLEMTLRERLRASLTRGKVECSLRIELSNNQNSELAL
NKAYAEKVISSLQTLRGIAGEGEINLVDILRYPGVVDAQTQDLDQIGQDLLAGFEQILADFIAMRGREGANLQALIQQRL
DTIAEIATKVQAQMPEILQWQKDKLQQRFDELNLQLDPQRLEQEMVLTAQRVDVAEELDRLQLHVKETTNVLKKGGAVGR
KLDFMMQELNRESNTLASKSINADVTNSAVELKVLIEQMREQIQNLE

Sequences:

>Translated_287_residues
MIYSMTAFAHLEIKKEWGNAVWEIRSVNQRFLETYFRLPEQFRNLEMTLRERLRASLTRGKVECSLRIELSNNQNSELAL
NKAYAEKVISSLQTLRGIAGEGEINLVDILRYPGVVDAQTQDLDQIGQDLLAGFEQILADFIAMRGREGANLQALIQQRL
DTIAEIATKVQAQMPEILQWQKDKLQQRFDELNLQLDPQRLEQEMVLTAQRVDVAEELDRLQLHVKETTNVLKKGGAVGR
KLDFMMQELNRESNTLASKSINADVTNSAVELKVLIEQMREQIQNLE
>Mature_287_residues
MIYSMTAFAHLEIKKEWGNAVWEIRSVNQRFLETYFRLPEQFRNLEMTLRERLRASLTRGKVECSLRIELSNNQNSELAL
NKAYAEKVISSLQTLRGIAGEGEINLVDILRYPGVVDAQTQDLDQIGQDLLAGFEQILADFIAMRGREGANLQALIQQRL
DTIAEIATKVQAQMPEILQWQKDKLQQRFDELNLQLDPQRLEQEMVLTAQRVDVAEELDRLQLHVKETTNVLKKGGAVGR
KLDFMMQELNRESNTLASKSINADVTNSAVELKVLIEQMREQIQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=62.3693379790941, Blast_Score=350, Evalue=8e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32940; Mature: 32940

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSMTAFAHLEIKKEWGNAVWEIRSVNQRFLETYFRLPEQFRNLEMTLRERLRASLTRG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVECSLRIELSNNQNSELALNKAYAEKVISSLQTLRGIAGEGEINLVDILRYPGVVDAQT
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCH
QDLDQIGQDLLAGFEQILADFIAMRGREGANLQALIQQRLDTIAEIATKVQAQMPEILQW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QKDKLQQRFDELNLQLDPQRLEQEMVLTAQRVDVAEELDRLQLHVKETTNVLKKGGAVGR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLDFMMQELNRESNTLASKSINADVTNSAVELKVLIEQMREQIQNLE
HHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIYSMTAFAHLEIKKEWGNAVWEIRSVNQRFLETYFRLPEQFRNLEMTLRERLRASLTRG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVECSLRIELSNNQNSELALNKAYAEKVISSLQTLRGIAGEGEINLVDILRYPGVVDAQT
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCH
QDLDQIGQDLLAGFEQILADFIAMRGREGANLQALIQQRLDTIAEIATKVQAQMPEILQW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QKDKLQQRFDELNLQLDPQRLEQEMVLTAQRVDVAEELDRLQLHVKETTNVLKKGGAVGR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLDFMMQELNRESNTLASKSINADVTNSAVELKVLIEQMREQIQNLE
HHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]