| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is csgB [C]
Identifier: 126175695
GI number: 126175695
Start: 4097848
End: 4098267
Strand: Direct
Name: csgB [C]
Synonym: Sbal_3498
Alternate gene names: 126175695
Gene position: 4097848-4098267 (Clockwise)
Preceding gene: 126175694
Following gene: 126175696
Centisome position: 79.92
GC content: 45.48
Gene sequence:
>420_bases GTGCCAAATACCTCGATACGCTTTTGGGTACCGCTGATCTTGCTCTGTAGTTGTATGACCTCAGCACAAGAGCTGAATGT CAATGAGTTACCCGTAACCCTGCAGGCATTACTGGAACGTTCCGGTCGCGATAATCTTATCGAGCTGGTGCAACAAGGCA ATGCCAACCAAGGATTACTGTTCCAATCAGGCAACGATAACAAGGCCGATGTGAAACAAGTCGGCAATGATAACGATGCG CTAATCACACAGATTGGTTCAAACAATGAAGTGCAACTACTGCAAGTCGGCAGTCAAAATACGGCTTCAGTGACACAAAT TGGCAACGACAATCTAGTGCAACTGAACCAGCTAGGAAGCGGCAATTTTTCGATTCAACAGATTGCAGACGGTGCTGCAA TCTCAATAACTCAATATTAA
Upstream 100 bases:
>100_bases GGCCAATTGCGGCATATTAACGGGACTCGTATCTTCAGGGCTGAATTTGGAGTGTCTGTTGTTTTAGACAACCCAAGATA TTTGATGCAAGGAGTCACCC
Downstream 100 bases:
>100_bases ACAGGGAGCGTCACATGAAATCACAAGCTAAAAAATCACTTATTGCTTTGGCCATTGCAACAGGTTTAAGCGGTCAAGCC TTTGCTGCCAGTACAGTGAG
Product: curlin-associated protein
Products: NA
Alternate protein names: Minor Curlin Subunit CsgB
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MPNTSIRFWVPLILLCSCMTSAQELNVNELPVTLQALLERSGRDNLIELVQQGNANQGLLFQSGNDNKADVKQVGNDNDA LITQIGSNNEVQLLQVGSQNTASVTQIGNDNLVQLNQLGSGNFSIQQIADGAAISITQY
Sequences:
>Translated_139_residues MPNTSIRFWVPLILLCSCMTSAQELNVNELPVTLQALLERSGRDNLIELVQQGNANQGLLFQSGNDNKADVKQVGNDNDA LITQIGSNNEVQLLQVGSQNTASVTQIGNDNLVQLNQLGSGNFSIQQIADGAAISITQY >Mature_138_residues PNTSIRFWVPLILLCSCMTSAQELNVNELPVTLQALLERSGRDNLIELVQQGNANQGLLFQSGNDNKADVKQVGNDNDAL ITQIGSNNEVQLLQVGSQNTASVTQIGNDNLVQLNQLGSGNFSIQQIADGAAISITQY
Specific function: Curlin Is The Structural Subunit Of The Curli. Curli Are Coiled Surface Structures That Assemble Preferentially At Growth Temperatures Below 37 Degrees Celsius. Curli Can Bind To Fibronectin. The Minor Subunit Is The Nucleation Component Of Curlin Monome
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14956; Mature: 14825
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTSIRFWVPLILLCSCMTSAQELNVNELPVTLQALLERSGRDNLIELVQQGNANQGLL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEE FQSGNDNKADVKQVGNDNDALITQIGSNNEVQLLQVGSQNTASVTQIGNDNLVQLNQLGS EECCCCCHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCC GNFSIQQIADGAAISITQY CCEEHEEECCCCEEEEECC >Mature Secondary Structure PNTSIRFWVPLILLCSCMTSAQELNVNELPVTLQALLERSGRDNLIELVQQGNANQGLL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEE FQSGNDNKADVKQVGNDNDALITQIGSNNEVQLLQVGSQNTASVTQIGNDNLVQLNQLGS EECCCCCHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCC GNFSIQQIADGAAISITQY CCEEHEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA