| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175652
Identifier: 126175652
GI number: 126175652
Start: 4050941
End: 4051621
Strand: Direct
Name: 126175652
Synonym: Sbal_3455
Alternate gene names: NA
Gene position: 4050941-4051621 (Clockwise)
Preceding gene: 126175650
Following gene: 126175653
Centisome position: 79.01
GC content: 43.47
Gene sequence:
>681_bases ATGCCAGTAAACTCTATTTTGGGCGTGTTTGCAAAATCGCCAATTAAGCCTCTTCAAGAGCACATGGACAAAGTACACGA TTGTGCATCGTTACTCGTCGCCTTTTTCGAAGCCACTATCACAGGTAACTGGGACAGTGCGGTTCAATTACGTAAGCAAA TTAGTTTAGCCGAGAAGCAAGCAGATTCACTAAAGCGTGAAATTCGCCTTACTCTGCCAAGCGGTTTGTTTATGCCAGTA GAACGTACAGATTTATTGGAACTTTTAACTCAACAAGACAAGATTGCCAACAAAGCAAAAGATATTTCTGGTCGTGTTAT CGGCCGTCAGCTGTTAATCCCTCAGGTCATGCAAGTCCCTTTTATTGCTTATCTACAACGCTGTATTGATGCGGTAGCAC TAGCAAAACAAGTCATTAATGAACTCGAAGATCTGTTAGAAACAGGTTTCCGTGGTCGTGAAGTCGACTTAGTGGCAAAA ATGATCAACGAACTCGATATCATCGAAGAAGATACTGACGATCTACAAATTCAGTTACGCCGTCAGTTATTCGCCATGGA ATCTGAATTGAATCCTGTCGATGTGATGTTCCTATACAAAACGATTGAGTGGGTCGGTGGTCTTGCAGATCTCGCCGAAC GCGTCGGTTCACGTCTTGAGCTTATGCTGGCTCGCGTTTAA
Upstream 100 bases:
>100_bases GTCGTTTTTTCTGAAAAAACACAGTTTCAATACGCGGACGCATAGGTTAACATGCGCCCGCTTTTTCCAATAATGGAACA ATCTAAATAGGTAAACGGCA
Downstream 100 bases:
>100_bases CAAATAAGGTTATCAAGGTATCAATATGGTTGATGCAGGTATTGAGGTGGCTAACGTCTTAGTCACCAATGGCCCGTGGC TTATTGCCGTTGCGGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPVNSILGVFAKSPIKPLQEHMDKVHDCASLLVAFFEATITGNWDSAVQLRKQISLAEKQADSLKREIRLTLPSGLFMPV ERTDLLELLTQQDKIANKAKDISGRVIGRQLLIPQVMQVPFIAYLQRCIDAVALAKQVINELEDLLETGFRGREVDLVAK MINELDIIEEDTDDLQIQLRRQLFAMESELNPVDVMFLYKTIEWVGGLADLAERVGSRLELMLARV
Sequences:
>Translated_226_residues MPVNSILGVFAKSPIKPLQEHMDKVHDCASLLVAFFEATITGNWDSAVQLRKQISLAEKQADSLKREIRLTLPSGLFMPV ERTDLLELLTQQDKIANKAKDISGRVIGRQLLIPQVMQVPFIAYLQRCIDAVALAKQVINELEDLLETGFRGREVDLVAK MINELDIIEEDTDDLQIQLRRQLFAMESELNPVDVMFLYKTIEWVGGLADLAERVGSRLELMLARV >Mature_225_residues PVNSILGVFAKSPIKPLQEHMDKVHDCASLLVAFFEATITGNWDSAVQLRKQISLAEKQADSLKREIRLTLPSGLFMPVE RTDLLELLTQQDKIANKAKDISGRVIGRQLLIPQVMQVPFIAYLQRCIDAVALAKQVINELEDLLETGFRGREVDLVAKM INELDIIEEDTDDLQIQLRRQLFAMESELNPVDVMFLYKTIEWVGGLADLAERVGSRLELMLARV
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25542; Mature: 25411
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVNSILGVFAKSPIKPLQEHMDKVHDCASLLVAFFEATITGNWDSAVQLRKQISLAEKQ CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADSLKREIRLTLPSGLFMPVERTDLLELLTQQDKIANKAKDISGRVIGRQLLIPQVMQVP HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIAYLQRCIDAVALAKQVINELEDLLETGFRGREVDLVAKMINELDIIEEDTDDLQIQLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH RQLFAMESELNPVDVMFLYKTIEWVGGLADLAERVGSRLELMLARV HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PVNSILGVFAKSPIKPLQEHMDKVHDCASLLVAFFEATITGNWDSAVQLRKQISLAEKQ CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADSLKREIRLTLPSGLFMPVERTDLLELLTQQDKIANKAKDISGRVIGRQLLIPQVMQVP HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIAYLQRCIDAVALAKQVINELEDLLETGFRGREVDLVAKMINELDIIEEDTDDLQIQLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH RQLFAMESELNPVDVMFLYKTIEWVGGLADLAERVGSRLELMLARV HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]