| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175578
Identifier: 126175578
GI number: 126175578
Start: 3957530
End: 3959827
Strand: Direct
Name: 126175578
Synonym: Sbal_3381
Alternate gene names: NA
Gene position: 3957530-3959827 (Clockwise)
Preceding gene: 126175577
Following gene: 126175579
Centisome position: 77.18
GC content: 47.17
Gene sequence:
>2298_bases ATGGCCACAGGGAAATACAAGGCAGTTCACGCCGCAATCGCACTGACAGTGGCAAGTATCACACTCTTGTTAACCGCCTG CGATGACTCAACGACGTCCTCAGAATCTGTTACGACGAATATACCCACAGATCGCGAGTATCAGATTATTTCCACCATAA GCCTCAACGATGGTTTCGAAACCCGCAAAGTGTTGCGGGCACGATTGCTGCTGGATTATCAATTACAAGATGCACAGGGT AAGGCGGCCAGCTTAACCACACCGTTAACCCATAACGCCCGCTTTTTTATCCAACCTAACCTGCTGCAAATTAGCGATTA TGGCATGCCGATCCCGGTGAGCAATATTGACCCCAAAGGCAAGTCCAATGAAATCTTTCAGTTGGTTAAAGATGGCTTTA ATGTGGAATTTAGTAATGGTGAAGTCCGCGAACTGACCCCCATTGCCAAGATGGATCAAAAAGATATCAAGGAGTTATTT GAGCGCTGGCAAAATCTTAATAACTTGTTTAAACAAGTCCCAACCTTGCCTGTGGCGCTTGAGCCTAGCGTCGGTTATAG CATCAACGCCCCCATGGATGCGCGCTTAACTTGGACGGTTGAGCAGGTCAGTGAAGATAAGTTGATCGCTGTTTTACAAG GGGAGAAAGACAAGTATAAGGCCTATGGCAAGTTCGAAGTTAACCGCAAAACCGGTTGGTTAGAGAGCATGGCGTTTTTT CAACGGGAAGAGCGCCAAGGGCGTACCTTTACCCACCGAGCCGTGATGACGCCTAAGGAGAGGCCGTATATCATGAGCAC GCTTTGGCATGCCGATGATAGCTTTGATGCTGAGCGCGATAGGGATGATAGGCAAAAGGAGCTATACCGCATTAGCGATA TACCGCAGGAATATCGCCCCAATAATGAGGCATTTATAAAATCCTTATTACCTGATCAACAAGGTATTTTAGATAATCTT GGCCCTTGGGGCACTGATACCCCTGAAGATCTGCAATTGCGCTTTGTCCACAATATGAGTCCGCAATATGTGGAAGCCGA TGTGCGTTATGAAGACTTAACCGCCTATGACGCAAACGGCAAACCGATTGACATTCACTTCTGGCAGCATGGCAAAGGTT GGGCGAGGAATTATAATCCCTCGATTGAGTCTGCAACCGATATTATTGCTACGGGTTGGGATAACACAGCGAATAAACTC AAGCAGATAGACCATATTAATGCCAAGCTATCGCTCATCCCACAGACGAATAAGATCGTCGAAAAGTCGTGGGATGAACT GCTGGCAACACCTTACACGGTTGGCGATGCCAGCCTAACAATCCAAGTGCTCGATGCCGAGGCGAAACTCTTTAAAGTCG TGTCAAAACAGAGTGAGGATCAGAGTATTAATCTGCCTTTCCAACAATTTAAAGGCATGATGGCTGAGGCCCGTCGCGAA GGTAATTATCCCTCTTGGCTAACGGCGACAGAAAAGGAACTGCTAGAGCAATTGATTGGAGCCGATGAGCCTCATCATCT CACCAGCACCGCACTGTTACTCAAGCTGGATGAAATTCCTAAAACCCTGATGTTAATTGAGCAACAACCCCAGCCGGAGT TGACTCAAACCAAAACGATCCGCTTTGTACAATTTAGCGACTACAACAAAAATCTGGCTAATCCTCCCACCGAGTTTGGT AACGCTGGCCTAGGTAGCTTTATCAATCCGGCGCTAGATGCTGCAAAAAATGAGTTCAGTACGATCCAAGGGATAAAACC TGTAACTGACAATGGTCATAATCTGTATATTCCCATGTCAGCTGCCTTGGCAAGCGCCTGCAAACCTGAAATAGATCAAG GCTTTAATGAGGGTAAAAATCCCGTCACTTGGCAGTTTGATCCCAACGCCCCAAACGGGGCAGCCTATAGTTTGATGACC CCAGACCGCGTGCGGCAGTTTTTCTACGATAAACAGATCAAGGGTAAGATCCGTTGCCAAGGTGATATCCATTGGCAGCC TTTAGAACTGGCTGTAACCGACCGCCCTTGGTTAATCGATTTAGAGTCTTGGCTGACGCAAACCGGATATGGCAATGAGC CAAGTAGCGATCTTAAAAATTACTTTAAGGTCGAAGATGCCCAAGGCAATCTGTTAACCATTCGACTCCCCGAAAATACT GAGCAGCGGATAAACGAGGTGCTGGTCGATGGTCGCTATTTAAGTATCGCAGGCCCCGCCGCCAAGGTGAGTTATATGAC GATCACCAAAGAGCCCGTCGATATCCCCTATGAATTCACCTTTAAACCTTTGCCATAA
Upstream 100 bases:
>100_bases GACGTCGTTTTATTGCCTCAGATAGTTTTTGTGTATAATGTCGCCAAACCAAGATTAATACATTTACATTTCAATAACAT GCGTAGCCAAGGGAGCACAA
Downstream 100 bases:
>100_bases AAAGGAGCAGTTATGCGTATATTTACAGTAAAACGGCTCCTTGGAGCACTCGTGCTTATCAGTACCCATGTCAATGCGGA AAAGGTGTTACTCGATGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 765; Mature: 764
Protein sequence:
>765_residues MATGKYKAVHAAIALTVASITLLLTACDDSTTSSESVTTNIPTDREYQIISTISLNDGFETRKVLRARLLLDYQLQDAQG KAASLTTPLTHNARFFIQPNLLQISDYGMPIPVSNIDPKGKSNEIFQLVKDGFNVEFSNGEVRELTPIAKMDQKDIKELF ERWQNLNNLFKQVPTLPVALEPSVGYSINAPMDARLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF QREERQGRTFTHRAVMTPKERPYIMSTLWHADDSFDAERDRDDRQKELYRISDIPQEYRPNNEAFIKSLLPDQQGILDNL GPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAYDANGKPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKL KQIDHINAKLSLIPQTNKIVEKSWDELLATPYTVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE GNYPSWLTATEKELLEQLIGADEPHHLTSTALLLKLDEIPKTLMLIEQQPQPELTQTKTIRFVQFSDYNKNLANPPTEFG NAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMSAALASACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMT PDRVRQFFYDKQIKGKIRCQGDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLTIRLPENT EQRINEVLVDGRYLSIAGPAAKVSYMTITKEPVDIPYEFTFKPLP
Sequences:
>Translated_765_residues MATGKYKAVHAAIALTVASITLLLTACDDSTTSSESVTTNIPTDREYQIISTISLNDGFETRKVLRARLLLDYQLQDAQG KAASLTTPLTHNARFFIQPNLLQISDYGMPIPVSNIDPKGKSNEIFQLVKDGFNVEFSNGEVRELTPIAKMDQKDIKELF ERWQNLNNLFKQVPTLPVALEPSVGYSINAPMDARLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF QREERQGRTFTHRAVMTPKERPYIMSTLWHADDSFDAERDRDDRQKELYRISDIPQEYRPNNEAFIKSLLPDQQGILDNL GPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAYDANGKPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKL KQIDHINAKLSLIPQTNKIVEKSWDELLATPYTVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE GNYPSWLTATEKELLEQLIGADEPHHLTSTALLLKLDEIPKTLMLIEQQPQPELTQTKTIRFVQFSDYNKNLANPPTEFG NAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMSAALASACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMT PDRVRQFFYDKQIKGKIRCQGDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLTIRLPENT EQRINEVLVDGRYLSIAGPAAKVSYMTITKEPVDIPYEFTFKPLP >Mature_764_residues ATGKYKAVHAAIALTVASITLLLTACDDSTTSSESVTTNIPTDREYQIISTISLNDGFETRKVLRARLLLDYQLQDAQGK AASLTTPLTHNARFFIQPNLLQISDYGMPIPVSNIDPKGKSNEIFQLVKDGFNVEFSNGEVRELTPIAKMDQKDIKELFE RWQNLNNLFKQVPTLPVALEPSVGYSINAPMDARLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFFQ REERQGRTFTHRAVMTPKERPYIMSTLWHADDSFDAERDRDDRQKELYRISDIPQEYRPNNEAFIKSLLPDQQGILDNLG PWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAYDANGKPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKLK QIDHINAKLSLIPQTNKIVEKSWDELLATPYTVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARREG NYPSWLTATEKELLEQLIGADEPHHLTSTALLLKLDEIPKTLMLIEQQPQPELTQTKTIRFVQFSDYNKNLANPPTEFGN AGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMSAALASACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMTP DRVRQFFYDKQIKGKIRCQGDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLTIRLPENTE QRINEVLVDGRYLSIAGPAAKVSYMTITKEPVDIPYEFTFKPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86627; Mature: 86495
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGKYKAVHAAIALTVASITLLLTACDDSTTSSESVTTNIPTDREYQIISTISLNDGFE CCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEECCCCHH TRKVLRARLLLDYQLQDAQGKAASLTTPLTHNARFFIQPNLLQISDYGMPIPVSNIDPKG HHHHHHHHHHHEEEECCCCCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCC KSNEIFQLVKDGFNVEFSNGEVRELTPIAKMDQKDIKELFERWQNLNNLFKQVPTLPVAL CCHHHHHHHHCCCCEEECCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE EPSVGYSINAPMDARLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF CCCCCEEECCCCCCEEEEEHHHCCCCCEEEEEECCCCCEEEECEEEECCCCCHHHHHHHH QREERQGRTFTHRAVMTPKERPYIMSTLWHADDSFDAERDRDDRQKELYRISDIPQEYRP HHHHHCCCEEEEEEECCCCCCCEEEHEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHCC NNEAFIKSLLPDQQGILDNLGPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAYDANG CHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEECCEEEEEEEECCCC KPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKLKQIDHINAKLSLIPQTNKIV CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHH EKSWDELLATPYTVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE HHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHC GNYPSWLTATEKELLEQLIGADEPHHLTSTALLLKLDEIPKTLMLIEQQPQPELTQTKTI CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHEEEEEHHHCCCEEEHCCCCCCCCCCCCEEE RFVQFSDYNKNLANPPTEFGNAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMS EEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH AALASACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMTPDRVRQFFYDKQIKGKIRCQ HHHHHHCCCHHHHCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEE GDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLTIRLPENT CCCCEEEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHEEEECCCCCEEEEECCCCH EQRINEVLVDGRYLSIAGPAAKVSYMTITKEPVDIPYEFTFKPLP HHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCEEEECCCC >Mature Secondary Structure ATGKYKAVHAAIALTVASITLLLTACDDSTTSSESVTTNIPTDREYQIISTISLNDGFE CCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEECCCCHH TRKVLRARLLLDYQLQDAQGKAASLTTPLTHNARFFIQPNLLQISDYGMPIPVSNIDPKG HHHHHHHHHHHEEEECCCCCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCC KSNEIFQLVKDGFNVEFSNGEVRELTPIAKMDQKDIKELFERWQNLNNLFKQVPTLPVAL CCHHHHHHHHCCCCEEECCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE EPSVGYSINAPMDARLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF CCCCCEEECCCCCCEEEEEHHHCCCCCEEEEEECCCCCEEEECEEEECCCCCHHHHHHHH QREERQGRTFTHRAVMTPKERPYIMSTLWHADDSFDAERDRDDRQKELYRISDIPQEYRP HHHHHCCCEEEEEEECCCCCCCEEEHEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHCC NNEAFIKSLLPDQQGILDNLGPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAYDANG CHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEECCEEEEEEEECCCC KPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKLKQIDHINAKLSLIPQTNKIV CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHH EKSWDELLATPYTVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE HHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHC GNYPSWLTATEKELLEQLIGADEPHHLTSTALLLKLDEIPKTLMLIEQQPQPELTQTKTI CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHEEEEEHHHCCCEEEHCCCCCCCCCCCCEEE RFVQFSDYNKNLANPPTEFGNAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMS EEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH AALASACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMTPDRVRQFFYDKQIKGKIRCQ HHHHHHCCCHHHHCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEE GDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLTIRLPENT CCCCEEEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHEEEECCCCCEEEEECCCCH EQRINEVLVDGRYLSIAGPAAKVSYMTITKEPVDIPYEFTFKPLP HHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA