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The map label for this gene is bdlA [H]

Identifier: 126175568

GI number: 126175568

Start: 3941888

End: 3943210

Strand: Direct

Name: bdlA [H]

Synonym: Sbal_3371

Alternate gene names: 126175568

Gene position: 3941888-3943210 (Clockwise)

Preceding gene: 126175567

Following gene: 126175571

Centisome position: 76.88

GC content: 40.21

Gene sequence:

>1323_bases
ATGATCATATTTAACAAAAAATTAAAGGCTGAACATGAACAATTGAAAGAAGAGTTATTTTCAATGCGGCAAGTTAGGGA
AAGCCTTGACAGTGAGATGTTAGTATTAGCGTTAGATGCTGATGGAAAAATTATCGCAATCAACGCTAATTTTACTGACG
ACATGTTATTTCAAAAAAGCTCACCTATCGGCAAACACTTAACGGAAATGGTGCCTCCGCGAGCGAGAAACACAAGTCAT
TATAAATCGATGTGCAATGCTATAAAGCAATGCGAGCATTGGGTAGGCGCACTGCAAATTGTTAAGGGCGATGGTGAGGA
AGCTTGGTTACGAGCCATTTTACAGCCCGTCAAAAACAGTAATGGCAAGTTAAAACACTTTTCTATTTATGCAAACGATC
TAACCCGTACTATTGAAAGCTCGAAAAAACATGAAGATTTAAACCAAGCATTACAGCGCTCTACCGCTGTTATTGAGTTT
AACTTAGACGGTACAGTCATTACTGCTAACGATAACTTTTTAAATGCGATGGGATACACTAAGAATCAAATTGTTGGTAA
ACACCATAGAATTTTTTGCGAACCAGAAGAATATAACTCAATAGAATACAAGCATTTTTGGGAGCAGCTATGCAAGGGAC
AATTTGTCGCGAATCGCTTTAAACGTGTTGATAGCTATGGCCGTATCGTTTGGTTAGAAGCCTCTTATAATCCGATTTTT
GATAGCTACAAAGAACTCTACAAAGTCGTAAAATTTGCCACTGTTATCACAGATCAAGTCAACAGAGAACTGGCCGTATC
CGAAGCGGCTGACATAGCCTATAGCACATCCCAACAAACCGATGCTTTTGCAAAAAAAGGGAGCTTAGTGCTACAAGAAA
CAGTTGTGATGATGAATAAATTAGCGACGCAAATGAATGATGCAGCGAAAGGCATTGAAGCATTAGATAAGCAATCTCAA
ATGATTGGTGAGCTAGTAAAAAGTATCAGTGGCATCGCCGATCAAACCAATCTTCTTGCCTTAAATGCAGCAATTGAAGC
CGCTCGCGCAGGAGAACAAGGACGCGGTTTTGCAGTCGTTGCAGATGAAGTCAGACAACTTGCCTCACGTACCAGTAAAG
CGACAGAGGAAATTGTAGAGGTAGTATCAAAGAATAAAATGTTAACCGAAAGTGCAGTCAATATGATTGAGCAAGGTAAG
CAACAAGCGCAACAGGGGTTAACACTCTCAACCCAATCGGGTGAGGTTATGTCAGAGATTCAAGATGGTGCACAAAAAGT
GGTTAATGCAGTTGGCCAATTCACCAACCAGCTAACTGTCTAA

Upstream 100 bases:

>100_bases
ATCTAATTAGCAGACTGCATCGTATAAGTAGAAAAAAATTATCGACTATACTCAGTTTCTCATCATAAAAATGACGTTTT
AAGACTTCTTGGAAATCAAT

Downstream 100 bases:

>100_bases
TTTTAAAATCCTTATGCCCTATAAAAATACATTTTTGGTGTTACATAAACGTGGTTGAACAGATTATCCATACACAAAAG
CCAGTTTGGCATCCCTGCCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIIFNKKLKAEHEQLKEELFSMRQVRESLDSEMLVLALDADGKIIAINANFTDDMLFQKSSPIGKHLTEMVPPRARNTSH
YKSMCNAIKQCEHWVGALQIVKGDGEEAWLRAILQPVKNSNGKLKHFSIYANDLTRTIESSKKHEDLNQALQRSTAVIEF
NLDGTVITANDNFLNAMGYTKNQIVGKHHRIFCEPEEYNSIEYKHFWEQLCKGQFVANRFKRVDSYGRIVWLEASYNPIF
DSYKELYKVVKFATVITDQVNRELAVSEAADIAYSTSQQTDAFAKKGSLVLQETVVMMNKLATQMNDAAKGIEALDKQSQ
MIGELVKSISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEIVEVVSKNKMLTESAVNMIEQGK
QQAQQGLTLSTQSGEVMSEIQDGAQKVVNAVGQFTNQLTV

Sequences:

>Translated_440_residues
MIIFNKKLKAEHEQLKEELFSMRQVRESLDSEMLVLALDADGKIIAINANFTDDMLFQKSSPIGKHLTEMVPPRARNTSH
YKSMCNAIKQCEHWVGALQIVKGDGEEAWLRAILQPVKNSNGKLKHFSIYANDLTRTIESSKKHEDLNQALQRSTAVIEF
NLDGTVITANDNFLNAMGYTKNQIVGKHHRIFCEPEEYNSIEYKHFWEQLCKGQFVANRFKRVDSYGRIVWLEASYNPIF
DSYKELYKVVKFATVITDQVNRELAVSEAADIAYSTSQQTDAFAKKGSLVLQETVVMMNKLATQMNDAAKGIEALDKQSQ
MIGELVKSISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEIVEVVSKNKMLTESAVNMIEQGK
QQAQQGLTLSTQSGEVMSEIQDGAQKVVNAVGQFTNQLTV
>Mature_440_residues
MIIFNKKLKAEHEQLKEELFSMRQVRESLDSEMLVLALDADGKIIAINANFTDDMLFQKSSPIGKHLTEMVPPRARNTSH
YKSMCNAIKQCEHWVGALQIVKGDGEEAWLRAILQPVKNSNGKLKHFSIYANDLTRTIESSKKHEDLNQALQRSTAVIEF
NLDGTVITANDNFLNAMGYTKNQIVGKHHRIFCEPEEYNSIEYKHFWEQLCKGQFVANRFKRVDSYGRIVWLEASYNPIF
DSYKELYKVVKFATVITDQVNRELAVSEAADIAYSTSQQTDAFAKKGSLVLQETVVMMNKLATQMNDAAKGIEALDKQSQ
MIGELVKSISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEIVEVVSKNKMLTESAVNMIEQGK
QQAQQGLTLSTQSGEVMSEIQDGAQKVVNAVGQFTNQLTV

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=172, Percent_Identity=38.953488372093, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI2367378, Length=169, Percent_Identity=38.4615384615385, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788195, Length=125, Percent_Identity=43.2, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787690, Length=138, Percent_Identity=42.0289855072464, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789453, Length=174, Percent_Identity=34.4827586206897, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 49140; Mature: 49140

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIFNKKLKAEHEQLKEELFSMRQVRESLDSEMLVLALDADGKIIAINANFTDDMLFQKS
CEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCHHHHHHCC
SPIGKHLTEMVPPRARNTSHYKSMCNAIKQCEHWVGALQIVKGDGEEAWLRAILQPVKNS
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCC
NGKLKHFSIYANDLTRTIESSKKHEDLNQALQRSTAVIEFNLDGTVITANDNFLNAMGYT
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCHHHCCCC
KNQIVGKHHRIFCEPEEYNSIEYKHFWEQLCKGQFVANRFKRVDSYGRIVWLEASYNPIF
HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHH
DSYKELYKVVKFATVITDQVNRELAVSEAADIAYSTSQQTDAFAKKGSLVLQETVVMMNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
LATQMNDAAKGIEALDKQSQMIGELVKSISGIADQTNLLALNAAIEAARAGEQGRGFAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHCCCCCCCEEEH
ADEVRQLASRTSKATEEIVEVVSKNKMLTESAVNMIEQGKQQAQQGLTLSTQSGEVMSEI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHH
QDGAQKVVNAVGQFTNQLTV
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIFNKKLKAEHEQLKEELFSMRQVRESLDSEMLVLALDADGKIIAINANFTDDMLFQKS
CEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCHHHHHHCC
SPIGKHLTEMVPPRARNTSHYKSMCNAIKQCEHWVGALQIVKGDGEEAWLRAILQPVKNS
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCC
NGKLKHFSIYANDLTRTIESSKKHEDLNQALQRSTAVIEFNLDGTVITANDNFLNAMGYT
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCHHHCCCC
KNQIVGKHHRIFCEPEEYNSIEYKHFWEQLCKGQFVANRFKRVDSYGRIVWLEASYNPIF
HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHH
DSYKELYKVVKFATVITDQVNRELAVSEAADIAYSTSQQTDAFAKKGSLVLQETVVMMNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH
LATQMNDAAKGIEALDKQSQMIGELVKSISGIADQTNLLALNAAIEAARAGEQGRGFAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHCCCCCCCEEEH
ADEVRQLASRTSKATEEIVEVVSKNKMLTESAVNMIEQGKQQAQQGLTLSTQSGEVMSEI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHH
QDGAQKVVNAVGQFTNQLTV
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]