| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is glsA [H]
Identifier: 126175238
GI number: 126175238
Start: 3561017
End: 3561931
Strand: Reverse
Name: glsA [H]
Synonym: Sbal_3036
Alternate gene names: 126175238
Gene position: 3561931-3561017 (Counterclockwise)
Preceding gene: 126175239
Following gene: 126175237
Centisome position: 69.47
GC content: 48.52
Gene sequence:
>915_bases ATGCCCGAGTTGGCATTACTTGAGGAAGTGGTCGAGAAAGTTCGACCCTTGCTCGGCCAAGGAAAGGTTGCAGATTACAT CCCCGCACTGGCCAGCGTTGATGCTGGCAAAATAGGCATTGCCGTCACAACCGTTGATGGTGAAACCTTAGGTGCGGGCG ATTACCTTGAGCCGTTTTCGATTCAAAGTATCTCCAAAGTTTTCAGCTTAACCTTAGCGTTAACTTTATATGAAGAGGCC GAAATTTGGAGCCGAGTTGGCAAAGAACCTTCGGGCCATTCATTCAACTCTTTAGTACAAGTCGAGTTAGAACGTGGCAA GCCGCGCAACCCATTTATCAATGCTGGCGCGTTAGTGATTGCTGACTTATTGCAGAGTCGTTTAGGTGCACCTAAACACA GAATGCTCGAGTTAGTCAGGCAACTAAGCCAAAACGATAAAGTGTGTTTCGACAAACAAGTGGCCGACTCCGAATATCAG CACAGTGCGCGCAATGCGGCGATTGCTTATTTGATGAAGTCCTTTGGTAATTTTCAAGGCGATGTCGATACTGTGCTGCG CACGTATTTTCATTACTGCGCCTTAAAGATGAATTGTGCTGACTTGTCTAAGGCCATGTTGTACTTGGCTAATCGCGGCA AAAGCATTACGGGGACTGAGCTTATCTCTCAGGTGCAAACTCGGCAGCTTAATGCCCTGTTGGCGACCTCGGGCCTATAC GATGGTGCAGGTGAGTTTGCCTATCGTGTTGGTATGCCAGGTAAAAGTGGCGTCGGTGGTGGCATCATTGCCGTTATTCC AGGGGAACTGTCGATTTGTGTTTGGTCGCCAGAACTCGATGGCAATGGCAATTCACTTGCTGGCACTGCCATGCTTGAGC ACTTAAGTCAGCGTCTTGGCCGATCTATTTTCTAG
Upstream 100 bases:
>100_bases AATGTACCGAAGAAGATATTGCTGCAGTTAAGGCATTCTGGGCGAACCAAAAAGTTTCTCAGGTTGAAGTTAGCGAACTG TACGACATTTGGTGGGGTTA
Downstream 100 bases:
>100_bases CTTTACCTCTCGTTTTTATTAGCACTATCAGACTAAAAGTTAGCGAATTTCGCTAATGACCTTTTAGTGCTAACTTTCCT AAATTCAACATAATCATATT
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKIGIAVTTVDGETLGAGDYLEPFSIQSISKVFSLTLALTLYEEA EIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVIADLLQSRLGAPKHRMLELVRQLSQNDKVCFDKQVADSEYQ HSARNAAIAYLMKSFGNFQGDVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLGRSIF
Sequences:
>Translated_304_residues MPELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKIGIAVTTVDGETLGAGDYLEPFSIQSISKVFSLTLALTLYEEA EIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVIADLLQSRLGAPKHRMLELVRQLSQNDKVCFDKQVADSEYQ HSARNAAIAYLMKSFGNFQGDVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLGRSIF >Mature_303_residues PELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKIGIAVTTVDGETLGAGDYLEPFSIQSISKVFSLTLALTLYEEAE IWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVIADLLQSRLGAPKHRMLELVRQLSQNDKVCFDKQVADSEYQH SARNAAIAYLMKSFGNFQGDVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLYD GAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLGRSIF
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=294, Percent_Identity=36.0544217687075, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI20336214, Length=294, Percent_Identity=34.0136054421769, Blast_Score=160, Evalue=2e-39, Organism=Escherichia coli, GI1787804, Length=301, Percent_Identity=63.4551495016611, Blast_Score=410, Evalue=1e-116, Organism=Escherichia coli, GI1786693, Length=289, Percent_Identity=36.3321799307958, Blast_Score=177, Evalue=5e-46, Organism=Caenorhabditis elegans, GI17507019, Length=296, Percent_Identity=36.1486486486487, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17532727, Length=297, Percent_Identity=33.3333333333333, Blast_Score=171, Evalue=4e-43, Organism=Caenorhabditis elegans, GI193204073, Length=310, Percent_Identity=32.9032258064516, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI193204075, Length=312, Percent_Identity=32.6923076923077, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI281363239, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=5e-43, Organism=Drosophila melanogaster, GI281363241, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=5e-43, Organism=Drosophila melanogaster, GI24653164, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=5e-43, Organism=Drosophila melanogaster, GI24653162, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=5e-43, Organism=Drosophila melanogaster, GI24653158, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI24653166, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI24653156, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI116008307, Length=285, Percent_Identity=35.4385964912281, Blast_Score=171, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015868 [H]
Pfam domain/function: PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 32798; Mature: 32667
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKIGIAVTTVDGETLGAGDYLEPFS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCH IQSISKVFSLTLALTLYEEAEIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHH ADLLQSRLGAPKHRMLELVRQLSQNDKVCFDKQVADSEYQHSARNAAIAYLMKSFGNFQG HHHHHHHHCCCHHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCC DVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLG CCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC RSIF CCCC >Mature Secondary Structure PELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKIGIAVTTVDGETLGAGDYLEPFS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCH IQSISKVFSLTLALTLYEEAEIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHH ADLLQSRLGAPKHRMLELVRQLSQNDKVCFDKQVADSEYQHSARNAAIAYLMKSFGNFQG HHHHHHHHCCCHHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCC DVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLG CCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC RSIF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA