| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126175237
Identifier: 126175237
GI number: 126175237
Start: 3560013
End: 3560834
Strand: Reverse
Name: 126175237
Synonym: Sbal_3035
Alternate gene names: NA
Gene position: 3560834-3560013 (Counterclockwise)
Preceding gene: 126175238
Following gene: 126175236
Centisome position: 69.45
GC content: 44.89
Gene sequence:
>822_bases ATGAAATTAAATAAGCTATTAACTGGATTTGCCTTATCCGGCGTGATTTTAGGGACATCTTGCCTACAGTTGGTGCAAGC GCAAACAGAGCCTAAAGTCGATGAACGTTGTGAAGTCTCTTTAAATTATGACGTTATGGTTGAGCCTAAAAAATTAGTCA TGAGTGAGAAGGGCACCGAAAAGTATCGCATCGAAGTCGATAAGTTATTTGTTGAAGGCAAACAAGTAAACTTAACCGAT AAGCAAAGAAAGTTAGTAACTCAATACGCCGATGAAGTGTCGACGCAAGTGCCTGAAGTGATTGAAGTCGTGAACGAGGC CGTCGCATTAGCGTCCCAAGCGGTGAGCATGGCGTTAACCCCTTTAATGGGCGATGCGGCCGGTGCTAAATTCGATGAAA TGATGGCAGGTGTCCAAAAGCGCGTTGATTCAGTGGCCTACCGTCATGGCGATAGCTTCTATCTCGGTGCGACGGAAGAC TCGATTCAGAACACCTTTAACGACGAATTCGAGCAGGAAATGGAGCAAATTGTTCAGAACTCCGTGGGCACCATTATGAT GACCATAGGTGGCCAAATCATGTCGGGTGACGGTGATAGTTTTGAAGCCAAGATGGATGCCTTCTCCAAGAAAATGGACA ACTTAGGCCAAGATATTGAGCAACAAATTGAGAGTCAATCTAAGGGACTGGAAGCTAAGGCTGATCGTTTATGCGACCGA TTTGAAAATCTGTTAGTGCTTGAAAATCAATTACGCCAAGAAGTACCAGAACTCGCGCCTTATGCGTTGACACAAAACTC AACCAAGGAGCTGCGTGAATAG
Upstream 100 bases:
>100_bases ATTCAACATAATCATATTGTTATAAAGTTGGCACGTCTCCTGCTACAAGCTATTCAGTAGTTTAGGTTTATCGAATTATT CAGATTAAAGGACGAACAAC
Downstream 100 bases:
>100_bases TTCTTGTTAATCGTCCTTGTTAATAGTTTTTGTGAATAGCCCTGAGTTTTAACTGCAATAACTTCTATCTCCTTGTGCAT GAGTCAAATTTGAATGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKLNKLLTGFALSGVILGTSCLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTEKYRIEVDKLFVEGKQVNLTD KQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALTPLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATED SIQNTFNDEFEQEMEQIVQNSVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR FENLLVLENQLRQEVPELAPYALTQNSTKELRE
Sequences:
>Translated_273_residues MKLNKLLTGFALSGVILGTSCLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTEKYRIEVDKLFVEGKQVNLTD KQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALTPLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATED SIQNTFNDEFEQEMEQIVQNSVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR FENLLVLENQLRQEVPELAPYALTQNSTKELRE >Mature_273_residues MKLNKLLTGFALSGVILGTSCLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTEKYRIEVDKLFVEGKQVNLTD KQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALTPLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATED SIQNTFNDEFEQEMEQIVQNSVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR FENLLVLENQLRQEVPELAPYALTQNSTKELRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30370; Mature: 30370
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKLLTGFALSGVILGTSCLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECHHHHHHCCCCCC KYRIEVDKLFVEGKQVNLTDKQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALT HHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATEDSIQNTFNDEFEQEMEQIVQN HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH SVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR HHCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FENLLVLENQLRQEVPELAPYALTQNSTKELRE HHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCC >Mature Secondary Structure MKLNKLLTGFALSGVILGTSCLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECHHHHHHCCCCCC KYRIEVDKLFVEGKQVNLTDKQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALT HHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATEDSIQNTFNDEFEQEMEQIVQN HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH SVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR HHCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FENLLVLENQLRQEVPELAPYALTQNSTKELRE HHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA