| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is hemH2 [H]
Identifier: 126175223
GI number: 126175223
Start: 3545801
End: 3546814
Strand: Reverse
Name: hemH2 [H]
Synonym: Sbal_3021
Alternate gene names: 126175223
Gene position: 3546814-3545801 (Counterclockwise)
Preceding gene: 126175224
Following gene: 126175218
Centisome position: 69.17
GC content: 45.17
Gene sequence:
>1014_bases TTGGCTAAATTTTCAGGCTTATCCAAAGAAGTTGGACACGGACAGCGCGGCAAAGTGGGCGTGCTGTTATTAAATTTAGG TACGCCAGATGCACCCACAGCATCGGCTGTTAGGCGTTATCTTGCTGAGTTCTTAGCAGATCCCCGCGTAGTCGAAATCC CTAAATTAGTGTGGATGATGATTTTACACGGGATAATTTTGCGGGTACGCCCAGCAAAATCGGCAGCGTTATACCAGAAG GTATGGACAGCGGCCGGTTCACCGTTAATGGACATTAGTTTGCGTCAAACGGCGAAGTTAGCGGATAAACTTAACGCTGA TAACCATGATGTTTCTGTCCATTTAGCAATGCGTTATGGCAGTCCATCGGTTGCCAGTACCTTGCAAACTATGCATCAAA ATGGCATTGATAAAATCGTGGTGTTACCTCTGTATCCCCAATATGCGGCGCCCACTACGGGTTCTGCTTTTGATGCGATT GCGGCTGAGTTGTCCAAGTGGCGCTATATTCCATCGTTGCATTTTATTAATACTTATCATGATAATGCTGATTTTATTAA CGCGTTAGCCAGTTCGATCACGGCTGATTTTGAAGCCCATGGTAAACCGCAAAAATTGGTGTTGTCTTATCATGGTATGC CTGAGCGTAATTTACATTTAGGCGATCCGTATTATTGCTTCTGCATGAAAACGACTCGACTGGTTACCGAAAAGCTTGGG TTAGGTAAAGATGAGTTTGTGATGACATTTCAATCGCGTTTTGGTAAAGCCAAATGGCTACAACCTTATACCGATGCGAC TTTGAAAGCGTTGCCGCAACAAGGCGTGCGCGATATTGCTATCGTTTGCCCGGCTTTTAGCGCCGATTGTTTAGAAACGC TGGAAGAAATTGTTGGTGAGAATGGTCATCTCTTTGCCGAGGCGGGTGGTGAGAAGTTCCGCTACATTGCTGCACTAAAC GATGATGATGCACACATTACTATGATGGCCAACTTAGTGAAGCCACATTTTTGA
Upstream 100 bases:
>100_bases AACAGTTCAATTCTAAAGTGAAGCCAGATAGCGAAGAGCTTAAGCAAGCAATAGAATCTGTACTTTAATTTTATAAGTAT TTATTAATTAAGAGGCTGTT
Downstream 100 bases:
>100_bases TCCGGTAATTTATCGGGTTAAACATCAAACAGAAAAGGATAAGGCAACTTATCCTTTTCTTTTTTCTGTGGTTTTATTTA TTGTGGCATTACTTGCTGAA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase 2; Protoheme ferro-lyase 2 [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAKFSGLSKEVGHGQRGKVGVLLLNLGTPDAPTASAVRRYLAEFLADPRVVEIPKLVWMMILHGIILRVRPAKSAALYQK VWTAAGSPLMDISLRQTAKLADKLNADNHDVSVHLAMRYGSPSVASTLQTMHQNGIDKIVVLPLYPQYAAPTTGSAFDAI AAELSKWRYIPSLHFINTYHDNADFINALASSITADFEAHGKPQKLVLSYHGMPERNLHLGDPYYCFCMKTTRLVTEKLG LGKDEFVMTFQSRFGKAKWLQPYTDATLKALPQQGVRDIAIVCPAFSADCLETLEEIVGENGHLFAEAGGEKFRYIAALN DDDAHITMMANLVKPHF
Sequences:
>Translated_337_residues MAKFSGLSKEVGHGQRGKVGVLLLNLGTPDAPTASAVRRYLAEFLADPRVVEIPKLVWMMILHGIILRVRPAKSAALYQK VWTAAGSPLMDISLRQTAKLADKLNADNHDVSVHLAMRYGSPSVASTLQTMHQNGIDKIVVLPLYPQYAAPTTGSAFDAI AAELSKWRYIPSLHFINTYHDNADFINALASSITADFEAHGKPQKLVLSYHGMPERNLHLGDPYYCFCMKTTRLVTEKLG LGKDEFVMTFQSRFGKAKWLQPYTDATLKALPQQGVRDIAIVCPAFSADCLETLEEIVGENGHLFAEAGGEKFRYIAALN DDDAHITMMANLVKPHF >Mature_336_residues AKFSGLSKEVGHGQRGKVGVLLLNLGTPDAPTASAVRRYLAEFLADPRVVEIPKLVWMMILHGIILRVRPAKSAALYQKV WTAAGSPLMDISLRQTAKLADKLNADNHDVSVHLAMRYGSPSVASTLQTMHQNGIDKIVVLPLYPQYAAPTTGSAFDAIA AELSKWRYIPSLHFINTYHDNADFINALASSITADFEAHGKPQKLVLSYHGMPERNLHLGDPYYCFCMKTTRLVTEKLGL GKDEFVMTFQSRFGKAKWLQPYTDATLKALPQQGVRDIAIVCPAFSADCLETLEEIVGENGHLFAEAGGEKFRYIAALND DDAHITMMANLVKPHF
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=333, Percent_Identity=27.027027027027, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI60499025, Length=333, Percent_Identity=27.027027027027, Blast_Score=112, Evalue=7e-25, Organism=Escherichia coli, GI1786681, Length=319, Percent_Identity=49.8432601880878, Blast_Score=311, Evalue=3e-86, Organism=Saccharomyces cerevisiae, GI6324750, Length=342, Percent_Identity=26.0233918128655, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI17864156, Length=346, Percent_Identity=24.8554913294798, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI24651774, Length=277, Percent_Identity=23.4657039711191, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 37184; Mature: 37053
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFSGLSKEVGHGQRGKVGVLLLNLGTPDAPTASAVRRYLAEFLADPRVVEIPKLVWMM CCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH ILHGIILRVRPAKSAALYQKVWTAAGSPLMDISLRQTAKLADKLNADNHDVSVHLAMRYG HHHHHHEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEEEECC SPSVASTLQTMHQNGIDKIVVLPLYPQYAAPTTGSAFDAIAAELSKWRYIPSLHFINTYH CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC DNADFINALASSITADFEAHGKPQKLVLSYHGMPERNLHLGDPYYCFCMKTTRLVTEKLG CCHHHHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCEECCCCEEEEEEHHHHHHHHHHC LGKDEFVMTFQSRFGKAKWLQPYTDATLKALPQQGVRDIAIVCPAFSADCLETLEEIVGE CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC NGHLFAEAGGEKFRYIAALNDDDAHITMMANLVKPHF CCEEEEECCCCEEEEEEEECCCCCEEEEEEHHHCCCC >Mature Secondary Structure AKFSGLSKEVGHGQRGKVGVLLLNLGTPDAPTASAVRRYLAEFLADPRVVEIPKLVWMM CCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH ILHGIILRVRPAKSAALYQKVWTAAGSPLMDISLRQTAKLADKLNADNHDVSVHLAMRYG HHHHHHEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEEEECC SPSVASTLQTMHQNGIDKIVVLPLYPQYAAPTTGSAFDAIAAELSKWRYIPSLHFINTYH CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC DNADFINALASSITADFEAHGKPQKLVLSYHGMPERNLHLGDPYYCFCMKTTRLVTEKLG CCHHHHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCEECCCCEEEEEEHHHHHHHHHHC LGKDEFVMTFQSRFGKAKWLQPYTDATLKALPQQGVRDIAIVCPAFSADCLETLEEIVGE CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC NGHLFAEAGGEKFRYIAALNDDDAHITMMANLVKPHF CCEEEEECCCCEEEEEEEECCCCCEEEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]