| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175218
Identifier: 126175218
GI number: 126175218
Start: 3543063
End: 3543623
Strand: Reverse
Name: 126175218
Synonym: Sbal_3016
Alternate gene names: NA
Gene position: 3543623-3543063 (Counterclockwise)
Preceding gene: 126175223
Following gene: 126175217
Centisome position: 69.11
GC content: 42.78
Gene sequence:
>561_bases ATGAAAAATATTTTTGTAGCTTTAGCCGTGCTGGCATTAAGTGCCTGTAGCTCGATGAAGTCTGGCTGGGACTATGATCC TAGCGCTAATTTTACCCAATATAAAACCTATGCTTGGGTTGCTCAGAAAGCCGATTCTGCCGGATATCATCTTGATGGCT TGATGGACCAAAGAGTAAGAGAGGCGGTTAATAGCCAGTTAGCGAGTAAAGGCATGACATTAGTCGATGCGAAAGACGCT GATGTATTGGTGAACTACCTGACCAAAGTCGATAAGAAAATCAATGTTGATACCTTCAATAGTAATTTTGGCTACAACCC ATACTATGGTCCAGGATGGGGTTGGGGCGGCAATATGCAGACCCAAACTACAGTGAGAGAATATGAAGTTGGTACTCTGA TTATTGATTTAGTTGATAATAAAACTACTAAGCTTATCTGGCGTGGTTCTGTTGCCGATACCATTCGCGACAAAAATACC CCAGAAGAAAGAGTACAGATCATCAATCAAGCGGTGGGCAGTGTGATGGCAAATTATCCCCCTAAGCCTGACACTAAGTA G
Upstream 100 bases:
>100_bases TTTTAATCAATTGAGTTGTAGATCAGATGATTGCTCTGTAAGCTAAATTCATATCTCTGATACTTGTCTTTGTTCGGTTC GAACATCTGAGGAAATTAAG
Downstream 100 bases:
>100_bases TTCTGACTCAGTTTGAATGAAAATTAAGCGGCCTGAGGGCCGCTTTTTTGTGGCTGATTTTTATGCGTTTTGCCCATTCG ATTAGATGATCTGCAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKNIFVALAVLALSACSSMKSGWDYDPSANFTQYKTYAWVAQKADSAGYHLDGLMDQRVREAVNSQLASKGMTLVDAKDA DVLVNYLTKVDKKINVDTFNSNFGYNPYYGPGWGWGGNMQTQTTVREYEVGTLIIDLVDNKTTKLIWRGSVADTIRDKNT PEERVQIINQAVGSVMANYPPKPDTK
Sequences:
>Translated_186_residues MKNIFVALAVLALSACSSMKSGWDYDPSANFTQYKTYAWVAQKADSAGYHLDGLMDQRVREAVNSQLASKGMTLVDAKDA DVLVNYLTKVDKKINVDTFNSNFGYNPYYGPGWGWGGNMQTQTTVREYEVGTLIIDLVDNKTTKLIWRGSVADTIRDKNT PEERVQIINQAVGSVMANYPPKPDTK >Mature_186_residues MKNIFVALAVLALSACSSMKSGWDYDPSANFTQYKTYAWVAQKADSAGYHLDGLMDQRVREAVNSQLASKGMTLVDAKDA DVLVNYLTKVDKKINVDTFNSNFGYNPYYGPGWGWGGNMQTQTTVREYEVGTLIIDLVDNKTTKLIWRGSVADTIRDKNT PEERVQIINQAVGSVMANYPPKPDTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20690; Mature: 20690
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIFVALAVLALSACSSMKSGWDYDPSANFTQYKTYAWVAQKADSAGYHLDGLMDQRVR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH EAVNSQLASKGMTLVDAKDADVLVNYLTKVDKKINVDTFNSNFGYNPYYGPGWGWGGNMQ HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC TQTTVREYEVGTLIIDLVDNKTTKLIWRGSVADTIRDKNTPEERVQIINQAVGSVMANYP CHHHHHHEECCEEEEEECCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PKPDTK CCCCCC >Mature Secondary Structure MKNIFVALAVLALSACSSMKSGWDYDPSANFTQYKTYAWVAQKADSAGYHLDGLMDQRVR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH EAVNSQLASKGMTLVDAKDADVLVNYLTKVDKKINVDTFNSNFGYNPYYGPGWGWGGNMQ HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC TQTTVREYEVGTLIIDLVDNKTTKLIWRGSVADTIRDKNTPEERVQIINQAVGSVMANYP CHHHHHHEECCEEEEEECCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PKPDTK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA