Click here to switch to the map view.

The map label for this gene is flgH [H]

Identifier: 126175143

GI number: 126175143

Start: 3456504

End: 3457178

Strand: Reverse

Name: flgH [H]

Synonym: Sbal_2941

Alternate gene names: 126175143

Gene position: 3457178-3456504 (Counterclockwise)

Preceding gene: 126175144

Following gene: 126175142

Centisome position: 67.43

GC content: 47.41

Gene sequence:

>675_bases
ATGGCTAGATATCTTGTGTTGGCCGTCGCGTTATTGCTTGCAGCTTGTAGCTCGACGCAAAAGAAACCCCTTGCGGATGA
TCCCTTTTATGCGCCGGTATATCCAGAGGCACCGCCGACAAAAATTGCCGCGACTGGTTCTATTTATCAAGACAGTCAAG
CATCTAGCTTGTATTCGGATATACGTGCTCACAAAGTTGGCGACATTATCACTATCGTTTTGAAAGAGTCGACTCAAGCT
AAGAAGAGTGCAGGCAATCAGATCAAAAAAGGTTCTGACATGAGCTTAGATCCTATCTTCGCCGGTGGCAGTAATATCTC
CGTTGGCGGTGTGCCACTTGATTTGCGCTACAAAGATAGCATGAACACTAAGCGTGAATCGGATGCCGACCAGAGCAATA
GTTTAGATGGCAGCATCTCGGCAAACGTGATGCAAGTGCTGAACAACGGCAGCTTAGTGATCCGCGGCGAAAAATGGATC
TCAATTAACAACGGTGATGAGTTTATTCGCGTCACAGGTCTGGTTCGCTCGCAGGACATTAAACCCGATAACACTATCGA
TTCAACGCGAATGGCCAATGCCCGTATTCAATACAGTGGCACAGGTACTTTCGCAGATGCTCAAAAAGTGGGCTGGTTAA
GCCAGTTCTTTATGAGCGACTGGTGGCCCTTCTAA

Upstream 100 bases:

>100_bases
TTATCGAAAGTCAGCGCATTTACGAGATGAACTCTAAAGTGATTTCAGCGGTAGATCAGATGCTGTCTTACGTAACTCAA
AATTTATAGAGGCAAACATC

Downstream 100 bases:

>100_bases
GGAGTCGTATCATGAAATATAAACTGGTGTTAGCCGTTGCCGTGCTAGTGTTTTCTTTACCTAGTCAGGCTGAACGAATT
AAAGATATTGCCAATGTGCA

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MARYLVLAVALLLAACSSTQKKPLADDPFYAPVYPEAPPTKIAATGSIYQDSQASSLYSDIRAHKVGDIITIVLKESTQA
KKSAGNQIKKGSDMSLDPIFAGGSNISVGGVPLDLRYKDSMNTKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWI
SINNGDEFIRVTGLVRSQDIKPDNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWPF

Sequences:

>Translated_224_residues
MARYLVLAVALLLAACSSTQKKPLADDPFYAPVYPEAPPTKIAATGSIYQDSQASSLYSDIRAHKVGDIITIVLKESTQA
KKSAGNQIKKGSDMSLDPIFAGGSNISVGGVPLDLRYKDSMNTKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWI
SINNGDEFIRVTGLVRSQDIKPDNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWPF
>Mature_223_residues
ARYLVLAVALLLAACSSTQKKPLADDPFYAPVYPEAPPTKIAATGSIYQDSQASSLYSDIRAHKVGDIITIVLKESTQAK
KSAGNQIKKGSDMSLDPIFAGGSNISVGGVPLDLRYKDSMNTKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWIS
INNGDEFIRVTGLVRSQDIKPDNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=220, Percent_Identity=34.0909090909091, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24321; Mature: 24189

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYLVLAVALLLAACSSTQKKPLADDPFYAPVYPEAPPTKIAATGSIYQDSQASSLYSD
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
IRAHKVGDIITIVLKESTQAKKSAGNQIKKGSDMSLDPIFAGGSNISVGGVPLDLRYKDS
HHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCEEEEEEECCC
MNTKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWISINNGDEFIRVTGLVRSQDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCEEEEEEEEECCCC
KPDNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWPF
CCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARYLVLAVALLLAACSSTQKKPLADDPFYAPVYPEAPPTKIAATGSIYQDSQASSLYSD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
IRAHKVGDIITIVLKESTQAKKSAGNQIKKGSDMSLDPIFAGGSNISVGGVPLDLRYKDS
HHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCEEEEEEECCC
MNTKRESDADQSNSLDGSISANVMQVLNNGSLVIRGEKWISINNGDEFIRVTGLVRSQDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCEEEEEEEEECCCC
KPDNTIDSTRMANARIQYSGTGTFADAQKVGWLSQFFMSDWWPF
CCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA