| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is msrA [H]
Identifier: 126174440
GI number: 126174440
Start: 2573346
End: 2573825
Strand: Direct
Name: msrA [H]
Synonym: Sbal_2224
Alternate gene names: 126174440
Gene position: 2573346-2573825 (Clockwise)
Preceding gene: 126174434
Following gene: 126174443
Centisome position: 50.19
GC content: 47.5
Gene sequence:
>480_bases ATGGCGTTAGCAACCTTTGGTGCCGGCTGTTTCTGGGGCGTAGAGTATTTTTTTAGACAAGTGAACGGCGTATCGAATGC CACCTGCGGTTACATGGGCGGTAATAATAGCGCGACCACCTATGAAGAAGTCAAAAAAGGCAAAACGGGCCACGCCGAAG TGGTACAAGTGGAGTTTGACCCTGCCCTTGTCAGTTATGAAGACTTACTTGACGTGTTTTGGAAAAACCACAATCCAACC AGCCTGAACATGCAAGGTGGAGATATAGGCACTCAATATCGCAGCACGATTTTCTTCCACGACCGTGAACAAAAAGCCGC GGCTGAAACCTCAAAGTTGGCTTTTGCCCGCTCGGGTCGCTGGGGATTGCGCCATATCGTGACTGAAATTGTGCCATTGC AACAGTTCCATGTGGCAGAGGAATATCACCAAAATTACATCGATAAGAATAACTTACCGAGTTGTCATATCGAGTACTAA
Upstream 100 bases:
>100_bases TCGAAAAATCGTCCAGCATAAATATTCCTGCTAGAGGCTTGCTTTTGCGCGCGAGTTTTATCACAATCCTTAGCCATCTA GACTTCTATTGGATTTAATT
Downstream 100 bases:
>100_bases ATACAGTCAAATCAGCATGAGATCAACTACTCATAACTGAATTAGACACAAACAAAAACGCACTCAAATCTGAGTGCGTT TGTTTTTTTATACTTTATAA
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MALATFGAGCFWGVEYFFRQVNGVSNATCGYMGGNNSATTYEEVKKGKTGHAEVVQVEFDPALVSYEDLLDVFWKNHNPT SLNMQGGDIGTQYRSTIFFHDREQKAAAETSKLAFARSGRWGLRHIVTEIVPLQQFHVAEEYHQNYIDKNNLPSCHIEY
Sequences:
>Translated_159_residues MALATFGAGCFWGVEYFFRQVNGVSNATCGYMGGNNSATTYEEVKKGKTGHAEVVQVEFDPALVSYEDLLDVFWKNHNPT SLNMQGGDIGTQYRSTIFFHDREQKAAAETSKLAFARSGRWGLRHIVTEIVPLQQFHVAEEYHQNYIDKNNLPSCHIEY >Mature_158_residues ALATFGAGCFWGVEYFFRQVNGVSNATCGYMGGNNSATTYEEVKKGKTGHAEVVQVEFDPALVSYEDLLDVFWKNHNPTS LNMQGGDIGTQYRSTIFFHDREQKAAAETSKLAFARSGRWGLRHIVTEIVPLQQFHVAEEYHQNYIDKNNLPSCHIEY
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=149, Percent_Identity=46.9798657718121, Blast_Score=130, Evalue=6e-31, Organism=Homo sapiens, GI208609995, Length=156, Percent_Identity=45.5128205128205, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI208609993, Length=104, Percent_Identity=48.0769230769231, Blast_Score=94, Evalue=7e-20, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=48.6842105263158, Blast_Score=140, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17533973, Length=147, Percent_Identity=36.734693877551, Blast_Score=93, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6320881, Length=157, Percent_Identity=39.4904458598726, Blast_Score=112, Evalue=3e-26, Organism=Drosophila melanogaster, GI24664627, Length=145, Percent_Identity=40.6896551724138, Blast_Score=110, Evalue=4e-25, Organism=Drosophila melanogaster, GI24664631, Length=145, Percent_Identity=40, Blast_Score=106, Evalue=8e-24, Organism=Drosophila melanogaster, GI45553131, Length=138, Percent_Identity=39.1304347826087, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 17963; Mature: 17832
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALATFGAGCFWGVEYFFRQVNGVSNATCGYMGGNNSATTYEEVKKGKTGHAEVVQVEFD CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCEEEEEECC PALVSYEDLLDVFWKNHNPTSLNMQGGDIGTQYRSTIFFHDREQKAAAETSKLAFARSGR CCHHCHHHHHHHHHCCCCCCEEEECCCCCCCCHHEEEEEECCHHHHHHHHHHHHHHCCCC WGLRHIVTEIVPLQQFHVAEEYHQNYIDKNNLPSCHIEY CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC >Mature Secondary Structure ALATFGAGCFWGVEYFFRQVNGVSNATCGYMGGNNSATTYEEVKKGKTGHAEVVQVEFD CCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCEEEEEECC PALVSYEDLLDVFWKNHNPTSLNMQGGDIGTQYRSTIFFHDREQKAAAETSKLAFARSGR CCHHCHHHHHHHHHCCCCCCEEEECCCCCCCCHHEEEEEECCHHHHHHHHHHHHHHCCCC WGLRHIVTEIVPLQQFHVAEEYHQNYIDKNNLPSCHIEY CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]