| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is copA [H]
Identifier: 126174422
GI number: 126174422
Start: 2550971
End: 2553370
Strand: Direct
Name: copA [H]
Synonym: Sbal_2206
Alternate gene names: 126174422
Gene position: 2550971-2553370 (Clockwise)
Preceding gene: 126174421
Following gene: 126174423
Centisome position: 49.75
GC content: 49.79
Gene sequence:
>2400_bases ATGACACATCCAAGTTGTTTTCACTGCCAAGAGCCCGTGCTGACGGGCCAGCAGTTTGTGACCCGCATCAATGATCGTGA TGAACTCATGTGTTGCCCTGGTTGTCAGGCGGTTTCTCAGACGATTGTGGATGCGGGATTACTCAGTTACTACAAGTTCC GCACTGAACCCGGCAGTAAACAGAACGCCCTCGTCCCCGAAGCCTTAACGCAGTTTAGTGCCTATGACTTGCCCGAAGTG CAGCAAGACTTTGTCCATTCTGAGGACAATGTCGAGTCAGTATCGCTCTCCATCGATGGCATCACCTGCGCGGCCTGTGC TTGGTTAATTGAGCACAAAGTAAAACAACTAACGGGCGTGAGCCAAGTGCTAGTCAACTCGACCACCCAAAGGGCGATGA TCAGTTGGGATAAACGCACGGTAAAACTCAGCGATATCCTTGGGCAAATTAGCCGCATCGGTTATCAAGCCGCGCCCTAT CAAGTCGATGAGCAAGAGCTCAACAACAAACTCAACAGCCGTAAATTTTTACTGCGCTTAGGCTTAGCGGGTTTTGCGAC CATGCAAGTGATGATGTTCGCCCTCGCCCTCTATACAGGCTATTTCACCGATTTAGATGTGCAATATCGGGATTATTTCC GTTGGGTTAGCATGATTTTTGCCACCCCCGTAGTGCTTTATTCGGCGCAGCCCTTTTATTTCAGTGCCATTCGTACCCTG CTCAGCGGCAAACTCAATATGGATGTGTCTGTCTCCATTGCGATTGGCGGCGCATACGTTGCCAGCTGTTTTGCCACAGT AAATGGCACAGGCGAAGTGTATTTTGAATCTGTGTCCATGTTTACCTTCTTCCTGTTATTGGGACGCTACTTCGAACAAA AAGCCAGGCAAAAGGCCTCAGTCAGCTCGAGTAATTTGCATAAGTTGGTACCGCTCACAGCGCACTTAGTGAACGACAAT GGTCAGGAAGAAATTCCCGCCAAAAAGTTACGTCTCAATGATGTGATCCTCGTCAAACCGGGTGAAATGATTGCAGCCGA TGGTGTGGTGATTGAAGGTCACACTAGCATCAATGAAGCTATGCTCACTGGCGAGCAAATGCCAATAGAAAAAACTGTTG CTAGCCAAGTTTACGCAGGCACCATCAACGTCGACCAACCCATCAAAGTTAGCGTCACAGCGCTAGGGCAAGACCAACTT GTGGCTGAGATTATTAGACTGCAGGAGCTTGCATCCAATACTAAACCTGCAATTGCGCTCTTAGCCGATAAGTTATCGCG CTATTTCTCGGGCACAATCCTGACCATAGCGACAATCACCTATTTGGTTTGGCATCAAATTTCCCCTGAGGATGCCTTTT GGGTAACGCTTTCGGTTTTGGTCGCAACTTGTCCTTGCGCCTTAGCACTGGCCACACCGACAGCAGTCACCTGCGCGACA GCTATTTTTACTCGCCTTGGGATTATTACTCGCAAAGCCGGTGTATTTGAAAAACTGCCACAGATCAAACATGTTGTCTT TGATAAAACCGGCACCCTCACCTGTGGTACCCTCTCTATCGGGCAAACGCAGTGCATGGCCGATTTAACCAAGACGCAAG CCTTAGCCATTGCCGCAGCGCTGGAAACAGGCTCTCGCCACCCGATTGCCGCGGCATTTGCCGTATTTGCCGATAATGCA TTGGTTACCGAAGAGGTTCACCATGAAGTCGGCTTTGGCGTTCGAGGCCGAATTGATGGCACTGATTACTTAATTGGCAA TGCAGTATTTACCGGCGCGAGTATTGATACTCGTGACCCAACCCAAAAGATTTGGTTAGCACGTTCATGCAATGAGCAGC TTGAAGTCCTTGCCAGCTTTGAAATTCAAGACAATATCCGCCAAGACAGCAAAGCCACGGTTGAAATGTTAAAGCAGCAA GGTTGCCGTATCAGTATTGCCAGCGGCGATAGCTCGGGGCATGTACATCAACTGGCAAAAGAGCTGGGCATAGACGATGT GCACAGCGGCTTAACGCCTGCAGATAAACTTGCCCTTGTGACCCGATTACAACAGCATACACGGGTTGCCATGTTTGGCG ATGGCATCAACGATGCACCTGTGCTTGCGGGCGCCGATTTGTCGGTGGCCATGGGCAGCGGCAGTGCTATCGCGAAAAAC AGTGCCGATTTAATTTTATTGGGGGATCATCTGTCCCGCTTCACCCAAGCCGTTAGCGTCGCGAAACTGACGACACAGAT TATCAGACAAAATTTAGCGTGGGCGCTGGGTTACAACGCCCTAATTTTGCCCTTAGCCGTCACTGGCCATGTGGCACCTT ATATCGCCGCCATTGGCATGTCGGCGAGTTCTTTGATTGTGGTCGGTAATAGCCTGAGATTATTGCGGGTTAAAGTGTGA
Upstream 100 bases:
>100_bases CTTGAAAGTTACGATGGCAAATGGCGCATTCACCAACGCGTTGAATTAAAAGATCACGTCCAACTTTGGCTGAACTGATT GTGGTTAAATAAGTAGCACT
Downstream 100 bases:
>100_bases TCACAATAAAAGTTAAACCAGAATAGTAAGAGGTCATTATGGAAATTATTTATGTGCTTATCCCCATTGCCATGATCTTT GTTGCCATCGCTGTAATGGT
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MTHPSCFHCQEPVLTGQQFVTRINDRDELMCCPGCQAVSQTIVDAGLLSYYKFRTEPGSKQNALVPEALTQFSAYDLPEV QQDFVHSEDNVESVSLSIDGITCAACAWLIEHKVKQLTGVSQVLVNSTTQRAMISWDKRTVKLSDILGQISRIGYQAAPY QVDEQELNNKLNSRKFLLRLGLAGFATMQVMMFALALYTGYFTDLDVQYRDYFRWVSMIFATPVVLYSAQPFYFSAIRTL LSGKLNMDVSVSIAIGGAYVASCFATVNGTGEVYFESVSMFTFFLLLGRYFEQKARQKASVSSSNLHKLVPLTAHLVNDN GQEEIPAKKLRLNDVILVKPGEMIAADGVVIEGHTSINEAMLTGEQMPIEKTVASQVYAGTINVDQPIKVSVTALGQDQL VAEIIRLQELASNTKPAIALLADKLSRYFSGTILTIATITYLVWHQISPEDAFWVTLSVLVATCPCALALATPTAVTCAT AIFTRLGIITRKAGVFEKLPQIKHVVFDKTGTLTCGTLSIGQTQCMADLTKTQALAIAAALETGSRHPIAAAFAVFADNA LVTEEVHHEVGFGVRGRIDGTDYLIGNAVFTGASIDTRDPTQKIWLARSCNEQLEVLASFEIQDNIRQDSKATVEMLKQQ GCRISIASGDSSGHVHQLAKELGIDDVHSGLTPADKLALVTRLQQHTRVAMFGDGINDAPVLAGADLSVAMGSGSAIAKN SADLILLGDHLSRFTQAVSVAKLTTQIIRQNLAWALGYNALILPLAVTGHVAPYIAAIGMSASSLIVVGNSLRLLRVKV
Sequences:
>Translated_799_residues MTHPSCFHCQEPVLTGQQFVTRINDRDELMCCPGCQAVSQTIVDAGLLSYYKFRTEPGSKQNALVPEALTQFSAYDLPEV QQDFVHSEDNVESVSLSIDGITCAACAWLIEHKVKQLTGVSQVLVNSTTQRAMISWDKRTVKLSDILGQISRIGYQAAPY QVDEQELNNKLNSRKFLLRLGLAGFATMQVMMFALALYTGYFTDLDVQYRDYFRWVSMIFATPVVLYSAQPFYFSAIRTL LSGKLNMDVSVSIAIGGAYVASCFATVNGTGEVYFESVSMFTFFLLLGRYFEQKARQKASVSSSNLHKLVPLTAHLVNDN GQEEIPAKKLRLNDVILVKPGEMIAADGVVIEGHTSINEAMLTGEQMPIEKTVASQVYAGTINVDQPIKVSVTALGQDQL VAEIIRLQELASNTKPAIALLADKLSRYFSGTILTIATITYLVWHQISPEDAFWVTLSVLVATCPCALALATPTAVTCAT AIFTRLGIITRKAGVFEKLPQIKHVVFDKTGTLTCGTLSIGQTQCMADLTKTQALAIAAALETGSRHPIAAAFAVFADNA LVTEEVHHEVGFGVRGRIDGTDYLIGNAVFTGASIDTRDPTQKIWLARSCNEQLEVLASFEIQDNIRQDSKATVEMLKQQ GCRISIASGDSSGHVHQLAKELGIDDVHSGLTPADKLALVTRLQQHTRVAMFGDGINDAPVLAGADLSVAMGSGSAIAKN SADLILLGDHLSRFTQAVSVAKLTTQIIRQNLAWALGYNALILPLAVTGHVAPYIAAIGMSASSLIVVGNSLRLLRVKV >Mature_798_residues THPSCFHCQEPVLTGQQFVTRINDRDELMCCPGCQAVSQTIVDAGLLSYYKFRTEPGSKQNALVPEALTQFSAYDLPEVQ QDFVHSEDNVESVSLSIDGITCAACAWLIEHKVKQLTGVSQVLVNSTTQRAMISWDKRTVKLSDILGQISRIGYQAAPYQ VDEQELNNKLNSRKFLLRLGLAGFATMQVMMFALALYTGYFTDLDVQYRDYFRWVSMIFATPVVLYSAQPFYFSAIRTLL SGKLNMDVSVSIAIGGAYVASCFATVNGTGEVYFESVSMFTFFLLLGRYFEQKARQKASVSSSNLHKLVPLTAHLVNDNG QEEIPAKKLRLNDVILVKPGEMIAADGVVIEGHTSINEAMLTGEQMPIEKTVASQVYAGTINVDQPIKVSVTALGQDQLV AEIIRLQELASNTKPAIALLADKLSRYFSGTILTIATITYLVWHQISPEDAFWVTLSVLVATCPCALALATPTAVTCATA IFTRLGIITRKAGVFEKLPQIKHVVFDKTGTLTCGTLSIGQTQCMADLTKTQALAIAAALETGSRHPIAAAFAVFADNAL VTEEVHHEVGFGVRGRIDGTDYLIGNAVFTGASIDTRDPTQKIWLARSCNEQLEVLASFEIQDNIRQDSKATVEMLKQQG CRISIASGDSSGHVHQLAKELGIDDVHSGLTPADKLALVTRLQQHTRVAMFGDGINDAPVLAGADLSVAMGSGSAIAKNS ADLILLGDHLSRFTQAVSVAKLTTQIIRQNLAWALGYNALILPLAVTGHVAPYIAAIGMSASSLIVVGNSLRLLRVKV
Specific function: Involved in copper export [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=789, Percent_Identity=28.1368821292776, Blast_Score=293, Evalue=4e-79, Organism=Homo sapiens, GI115529486, Length=550, Percent_Identity=28.9090909090909, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI55743073, Length=591, Percent_Identity=27.4111675126904, Blast_Score=198, Evalue=1e-50, Organism=Escherichia coli, GI1786691, Length=840, Percent_Identity=29.6428571428571, Blast_Score=311, Evalue=1e-85, Organism=Escherichia coli, GI1789879, Length=718, Percent_Identity=30.3621169916435, Blast_Score=286, Evalue=5e-78, Organism=Escherichia coli, GI1786914, Length=466, Percent_Identity=26.3948497854077, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17556548, Length=796, Percent_Identity=26.0050251256281, Blast_Score=217, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17557486, Length=196, Percent_Identity=25.5102040816327, Blast_Score=70, Evalue=6e-12, Organism=Caenorhabditis elegans, GI32566766, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17557770, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320475, Length=740, Percent_Identity=27.8378378378378, Blast_Score=275, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6319772, Length=664, Percent_Identity=29.6686746987952, Blast_Score=260, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6325221, Length=542, Percent_Identity=23.8007380073801, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321271, Length=410, Percent_Identity=22.4390243902439, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221329854, Length=619, Percent_Identity=28.2714054927302, Blast_Score=206, Evalue=7e-53, Organism=Drosophila melanogaster, GI17136664, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24762455, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24762453, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24762447, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24762457, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24762449, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24762445, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24762451, Length=168, Percent_Identity=25.5952380952381, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR001366 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 86598; Mature: 86466
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPSCFHCQEPVLTGQQFVTRINDRDELMCCPGCQAVSQTIVDAGLLSYYKFRTEPGSK CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEECCCCCC QNALVPEALTQFSAYDLPEVQQDFVHSEDNVESVSLSIDGITCAACAWLIEHKVKQLTGV CCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH SQVLVNSTTQRAMISWDKRTVKLSDILGQISRIGYQAAPYQVDEQELNNKLNSRKFLLRL HHHHHCCCHHHHHEECCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHH GLAGFATMQVMMFALALYTGYFTDLDVQYRDYFRWVSMIFATPVVLYSAQPFYFSAIRTL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH LSGKLNMDVSVSIAIGGAYVASCFATVNGTGEVYFESVSMFTFFLLLGRYFEQKARQKAS HCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHC VSSSNLHKLVPLTAHLVNDNGQEEIPAKKLRLNDVILVKPGEMIAADGVVIEGHTSINEA CCCCCCHHHHHHHHEEECCCCCCCCCHHHEEECCEEEECCCCEEEECCEEEECCCCHHHH MLTGEQMPIEKTVASQVYAGTINVDQPIKVSVTALGQDQLVAEIIRLQELASNTKPAIAL HHCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHH LADKLSRYFSGTILTIATITYLVWHQISPEDAFWVTLSVLVATCPCALALATPTAVTCAT HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AIFTRLGIITRKAGVFEKLPQIKHVVFDKTGTLTCGTLSIGQTQCMADLTKTQALAIAAA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH LETGSRHPIAAAFAVFADNALVTEEVHHEVGFGVRGRIDGTDYLIGNAVFTGASIDTRDP HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCEEECCEEEECCCCCCCCC TQKIWLARSCNEQLEVLASFEIQDNIRQDSKATVEMLKQQGCRISIASGDSSGHVHQLAK HHHHHHHHCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH ELGIDDVHSGLTPADKLALVTRLQQHTRVAMFGDGINDAPVLAGADLSVAMGSGSAIAKN HCCCHHHHCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCEEECCCCEEEECCCCEEECC SADLILLGDHLSRFTQAVSVAKLTTQIIRQNLAWALGYNALILPLAVTGHVAPYIAAIGM CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCC SASSLIVVGNSLRLLRVKV CCCEEEEECCCEEEEEEEC >Mature Secondary Structure THPSCFHCQEPVLTGQQFVTRINDRDELMCCPGCQAVSQTIVDAGLLSYYKFRTEPGSK CCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHEECCCCCC QNALVPEALTQFSAYDLPEVQQDFVHSEDNVESVSLSIDGITCAACAWLIEHKVKQLTGV CCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH SQVLVNSTTQRAMISWDKRTVKLSDILGQISRIGYQAAPYQVDEQELNNKLNSRKFLLRL HHHHHCCCHHHHHEECCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHH GLAGFATMQVMMFALALYTGYFTDLDVQYRDYFRWVSMIFATPVVLYSAQPFYFSAIRTL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH LSGKLNMDVSVSIAIGGAYVASCFATVNGTGEVYFESVSMFTFFLLLGRYFEQKARQKAS HCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHC VSSSNLHKLVPLTAHLVNDNGQEEIPAKKLRLNDVILVKPGEMIAADGVVIEGHTSINEA CCCCCCHHHHHHHHEEECCCCCCCCCHHHEEECCEEEECCCCEEEECCEEEECCCCHHHH MLTGEQMPIEKTVASQVYAGTINVDQPIKVSVTALGQDQLVAEIIRLQELASNTKPAIAL HHCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHH LADKLSRYFSGTILTIATITYLVWHQISPEDAFWVTLSVLVATCPCALALATPTAVTCAT HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AIFTRLGIITRKAGVFEKLPQIKHVVFDKTGTLTCGTLSIGQTQCMADLTKTQALAIAAA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH LETGSRHPIAAAFAVFADNALVTEEVHHEVGFGVRGRIDGTDYLIGNAVFTGASIDTRDP HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCEEECCEEEECCCCCCCCC TQKIWLARSCNEQLEVLASFEIQDNIRQDSKATVEMLKQQGCRISIASGDSSGHVHQLAK HHHHHHHHCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH ELGIDDVHSGLTPADKLALVTRLQQHTRVAMFGDGINDAPVLAGADLSVAMGSGSAIAKN HCCCHHHHCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCEEECCCCEEEECCCCEEECC SADLILLGDHLSRFTQAVSVAKLTTQIIRQNLAWALGYNALILPLAVTGHVAPYIAAIGM CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCC SASSLIVVGNSLRLLRVKV CCCEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA