| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126174419
Identifier: 126174419
GI number: 126174419
Start: 2549214
End: 2549390
Strand: Direct
Name: 126174419
Synonym: Sbal_2203
Alternate gene names: NA
Gene position: 2549214-2549390 (Clockwise)
Preceding gene: 126174418
Following gene: 126174420
Centisome position: 49.72
GC content: 42.94
Gene sequence:
>177_bases ATGGATTACGGCACATTACAAGGCATTTTAACCATCATTGTGATGCTGACCTTCGTCGGTATATTTGCTTGGGCATATAG CTCGCGTCGTCAAAAATCATTTGATGAAGCAGCTAACCTTGTGTTTTCCGATGAGGAAGTCAGCAAGGTATCGAAGGACT CAGGAGAGAATAAGTGA
Upstream 100 bases:
>100_bases TCGCAGGCGCACAGAAAGCTGTTGCTGGTAAGACAGAGCTGGAAGCCTTGATTGCATATCTTCAGTCTTTGGGTCACGCA CTCAAATAAGGAGGCAATAT
Downstream 100 bases:
>100_bases TGAGTAGCTTCTGGAGTGTTTGGATTACCGTACTCTCGTTAGTCGTGATCGCGGGTTGTTTTCTATTACTGCGTGTGTGT TCTAAGAACACCACGGGCGT
Product: Cbb3-type cytochrome oxidase component
Products: ferricytochrome c; H2O
Alternate protein names: Cytochrome C Oxidase Cbb3-Type CcoQ Subunit
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEVSKVSKDSGENK
Sequences:
>Translated_58_residues MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEVSKVSKDSGENK >Mature_58_residues MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEVSKVSKDSGENK
Specific function: Unknown
COG id: COG4736
COG function: function code O; Cbb3-type cytochrome oxidase, subunit 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 6494; Mature: 6494
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEVSKVSKDSGENK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEVSKVSKDSGENK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA