| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174405
Identifier: 126174405
GI number: 126174405
Start: 2533389
End: 2534534
Strand: Direct
Name: 126174405
Synonym: Sbal_2189
Alternate gene names: NA
Gene position: 2533389-2534534 (Clockwise)
Preceding gene: 126174404
Following gene: 126174408
Centisome position: 49.41
GC content: 42.41
Gene sequence:
>1146_bases ATGATAAACGCTATTGTTGGACGCCCAAGGGCTGGCAAATCCTATGAGTCTGTTATTTACCATATTATCCCAGCCGCAAT GGAAGGGCGCTTGGTTGTAACAAATATCCCAGTTAACAAAGAGGCGGTAGCCAAGTTTTATACTCAAGCTGCCGCTGATT TAATTATTCATGTCAAAGCCAATTTTACAGACTATGGCATGATTCGTCCTTTTGCTACTCCTGAGGACTACACTAAATAC GATTGGAAAAACGAAAAGGGACAAGGCCCCTTATTCGTTGTCGACGAGGCTCACCTTGCAATCGGTCGTGATGCCAAAAA AGAAGTTTTGGAATATCTTTCAATGCATGGCCATTATGGTCACGACATCATTATGGTGACTCAAGACCCTCAAAAGCTAC ATCGCGATTTAAAGTCCATGGTTGAGGTTTGTTGGCGTTGTATTAAAAAATCCGTATTCGGTGACGACAAGCATTATATT AAAAAAACCTATCATGGCGTCGGTGGTCGCAATGAAGATTTTGTACACGAAGAGGAACGTGAATATAAAACTCAGTTCTT TCAGTTTTACCAATCTCATACACAATCATCATCAGCAGTCGATGAAGCAAAGCCTAAGGACGTCCAAGCTGTAATGTTCC CTCGTAAGAAGCTTATTATTGGTATGCTAATTATTGCTGTCCCTATGGCCTTATTTTTTGGTGCAAAAATGATTGCACCC TCCGAGTCAACTAAGCCAAAGACTTCCAATGTTTCAACTCAACAAACTCAAGCACAAGTTCAGCAGGTTTCAACACCAAC AGCCATGTCCGCCCCAGTTCGCACAGCTTCCGTCTCATCTAAGCCAGATATTCCAAAGCATCCTTTTTATAAGGTTACTT TGCATCTTGATGGCATAGCTTATTACACGCTTAAAGGTCGTGATTATAAGGAGTCTTATTTTGTTGCTACACAGAACGGT CAGCCCGTTTTTAATATCGCTAGCGCTGACTTGCGTATGGCTGGATATGATGTCGCTGTTTACGGCGAGTGCCTTGTTAG ATTGACTTATAACGACATCTATGACGATTGGATTACATGCGACTCACCACAAATTGCTTTATCCGAACCAACTGCTAAAC CATCCGAGCCTGAGAGCGGTGTCTAG
Upstream 100 bases:
>100_bases ACATGGCTATATGTGGTTTTAACGAATCAATGGGGATGATTGTTACCGCCTTATCCATTCGTTTTATTCTGCAATTAATT CCATTTGTGAGGTTAGGTTC
Downstream 100 bases:
>100_bases GAAGGGACCCGCTTGCGGGAAGGCTCCTAGACTATAGCGAACAGCGAGAGGGGTTTTAAATGAACGAACTAATGATATTA TTTACGTGCGTCTTAACAGT
Product: zonular occludens toxin
Products: NA
Alternate protein names: Phage-Related Membrane Protein; Assembly Protein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MINAIVGRPRAGKSYESVIYHIIPAAMEGRLVVTNIPVNKEAVAKFYTQAAADLIIHVKANFTDYGMIRPFATPEDYTKY DWKNEKGQGPLFVVDEAHLAIGRDAKKEVLEYLSMHGHYGHDIIMVTQDPQKLHRDLKSMVEVCWRCIKKSVFGDDKHYI KKTYHGVGGRNEDFVHEEEREYKTQFFQFYQSHTQSSSAVDEAKPKDVQAVMFPRKKLIIGMLIIAVPMALFFGAKMIAP SESTKPKTSNVSTQQTQAQVQQVSTPTAMSAPVRTASVSSKPDIPKHPFYKVTLHLDGIAYYTLKGRDYKESYFVATQNG QPVFNIASADLRMAGYDVAVYGECLVRLTYNDIYDDWITCDSPQIALSEPTAKPSEPESGV
Sequences:
>Translated_381_residues MINAIVGRPRAGKSYESVIYHIIPAAMEGRLVVTNIPVNKEAVAKFYTQAAADLIIHVKANFTDYGMIRPFATPEDYTKY DWKNEKGQGPLFVVDEAHLAIGRDAKKEVLEYLSMHGHYGHDIIMVTQDPQKLHRDLKSMVEVCWRCIKKSVFGDDKHYI KKTYHGVGGRNEDFVHEEEREYKTQFFQFYQSHTQSSSAVDEAKPKDVQAVMFPRKKLIIGMLIIAVPMALFFGAKMIAP SESTKPKTSNVSTQQTQAQVQQVSTPTAMSAPVRTASVSSKPDIPKHPFYKVTLHLDGIAYYTLKGRDYKESYFVATQNG QPVFNIASADLRMAGYDVAVYGECLVRLTYNDIYDDWITCDSPQIALSEPTAKPSEPESGV >Mature_381_residues MINAIVGRPRAGKSYESVIYHIIPAAMEGRLVVTNIPVNKEAVAKFYTQAAADLIIHVKANFTDYGMIRPFATPEDYTKY DWKNEKGQGPLFVVDEAHLAIGRDAKKEVLEYLSMHGHYGHDIIMVTQDPQKLHRDLKSMVEVCWRCIKKSVFGDDKHYI KKTYHGVGGRNEDFVHEEEREYKTQFFQFYQSHTQSSSAVDEAKPKDVQAVMFPRKKLIIGMLIIAVPMALFFGAKMIAP SESTKPKTSNVSTQQTQAQVQQVSTPTAMSAPVRTASVSSKPDIPKHPFYKVTLHLDGIAYYTLKGRDYKESYFVATQNG QPVFNIASADLRMAGYDVAVYGECLVRLTYNDIYDDWITCDSPQIALSEPTAKPSEPESGV
Specific function: Unknown
COG id: COG4128
COG function: function code R; Zonula occludens toxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42851; Mature: 42851
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINAIVGRPRAGKSYESVIYHIIPAAMEGRLVVTNIPVNKEAVAKFYTQAAADLIIHVKA CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEEEE NFTDYGMIRPFATPEDYTKYDWKNEKGQGPLFVVDEAHLAIGRDAKKEVLEYLSMHGHYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHCCCCC HDIIMVTQDPQKLHRDLKSMVEVCWRCIKKSVFGDDKHYIKKTYHGVGGRNEDFVHEEER CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHH EYKTQFFQFYQSHTQSSSAVDEAKPKDVQAVMFPRKKLIIGMLIIAVPMALFFGAKMIAP HHHHHHHHHHHHHCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCEEECC SESTKPKTSNVSTQQTQAQVQQVSTPTAMSAPVRTASVSSKPDIPKHPFYKVTLHLDGIA CCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCEECCCCCCCCCCCCCCEEEEEEECCEE YYTLKGRDYKESYFVATQNGQPVFNIASADLRMAGYDVAVYGECLVRLTYNDIYDDWITC EEEECCCCCCCEEEEEECCCCEEEEEECCCEEECCCCEEEEEEEEEEEEHHHHCCCCCCC DSPQIALSEPTAKPSEPESGV CCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MINAIVGRPRAGKSYESVIYHIIPAAMEGRLVVTNIPVNKEAVAKFYTQAAADLIIHVKA CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEEEE NFTDYGMIRPFATPEDYTKYDWKNEKGQGPLFVVDEAHLAIGRDAKKEVLEYLSMHGHYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHCCCCC HDIIMVTQDPQKLHRDLKSMVEVCWRCIKKSVFGDDKHYIKKTYHGVGGRNEDFVHEEER CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHH EYKTQFFQFYQSHTQSSSAVDEAKPKDVQAVMFPRKKLIIGMLIIAVPMALFFGAKMIAP HHHHHHHHHHHHHCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCEEECC SESTKPKTSNVSTQQTQAQVQQVSTPTAMSAPVRTASVSSKPDIPKHPFYKVTLHLDGIA CCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCEECCCCCCCCCCCCCCEEEEEEECCEE YYTLKGRDYKESYFVATQNGQPVFNIASADLRMAGYDVAVYGECLVRLTYNDIYDDWITC EEEECCCCCCCEEEEEECCCCEEEEEECCCEEECCCCEEEEEEEEEEEEHHHHCCCCCCC DSPQIALSEPTAKPSEPESGV CCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA