Click here to switch to the map view.

The map label for this gene is tnpA [H]

Identifier: 126174399

GI number: 126174399

Start: 2527424

End: 2530012

Strand: Direct

Name: tnpA [H]

Synonym: Sbal_2183

Alternate gene names: 126174399

Gene position: 2527424-2530012 (Clockwise)

Preceding gene: 126174395

Following gene: 126174400

Centisome position: 49.29

GC content: 49.36

Gene sequence:

>2589_bases
ATGCGAACTGACAAAGGGTTTATGTTGGCGGAAGAAATGCTCAGCTGGCTACATAACAATAATGTTATTTTCCCTTCTGT
TGATGTGATCGAGCGGACGATTGCCGAAATCGTCACGCTGTCTGACAGAGCCGTATTTTCGGCACTTACCGCGCAACTGG
AAAATCATCATAAATCAGCACTCGACAGCCTGCTCATATCAGAGAGTGACCAACCTTCCCGTCTGGCGTGGTTACTTCAG
CCATCGGGTAAAATCAACGGTAAAAATGTGCTGCAACATATCGACCGGCTTAATTCCATTACTGCGCTGGGATTGCCTGA
TGGTATTGCGCTTTCCGTTCACCAGAACAGGTTGCTTAAGCTAGCGCGTGAGGGACGAAAAATGAGCAGCAGAGATCTGG
CAAAATTCACCGATGTCAGACGTTACGCTACGATGATTTGTATAATAACAGAGGCCCGGGCCACCCTAACAGACGAAGTG
ATTGATCTACACGAGCGTATTCTGGGCAGTCTGTTCAGCAGGGCAAAACGAACGCAGTCCGAACGACTCCAGCAAACGGG
AAAGCTTATTCAGAGCAAGCTAAAGCAGTACGTTACCGTCGGTCAGGCGTTACTTAACGCCAGAGAATCCGGCGAAGATC
CCTGGACCGCAATAGAAGACGTCCTTCCATGGCAGGAATTCATCAACAGTGTGGAGGAAACGCGGGTTCTGTCCCGTAAG
GGCAATTTCGACCCACTTCACCTGATCACCGAAAAATACAGCACGCTGCGTAAATACGCCCCGCGTATGCTGTCAGCATT
GCAGTTCACGGCGGCGCCTGCAGCTCAGATGCTCAGCGATGCACTGGACACCATAACTGAAATGTACCGTAAGCAACTTC
GTCAAGTTCCGCCGGCAGCGCCAACAGGATTTATCCCTGAAAGCTGGCGAAAACTGGTGCTCACACCATCCGGGATCGAC
CGCAAATACTACGAGTTTTGCGTACTGAATGAACTCAAAGGGGCGTTACGTTCCGGTGATATCTGGGTAAAAGGATCACG
TCGCTACAGAAATTTTGATGATTATCTCATCACGGCTGCTGAGTTTGAGAAATTCCGCCATAATGATCAGTTACAGTTGG
CCGTTCAGACCGATTGCCGGGCATACCTTCAGGCTCGTATGACCCTTCTTGCATCGCGTCTGGAAGAAGTTAACGCGATG
GCGCTTGCTGGTGATTTGCCCGATGTTGATATCTCAGATAAAGGCGTAAAAATAACCCCGTTGGAGAACAGCGTTCCTTC
GGGTGTCTCGCCCTTTGCCGATTTGGTTTATGGCATGCTTCCCCATCCGAAAATTACGGAGATACTGGAAGAAGTGGATA
ACTGGACTGGGTTTACGCGTCACTTCACGCACCTCAAAAATAATAACGTCAGACCAAAAGACGGAAGACCGTTGCTGACC
ACCATTTTGGCTGACGGCATCAATCTGGGGCTGACAAAAATGGCGGAGTCCTGCCCGGGGGCAACAAAATCGACACTCGA
AGGTATTCAGGCATGGTACATCAGAGATGAAACTTATTCAGCAGCACTTGTTGAGTTGGTCAATGCCCAGAAAGCGCGCC
CGCTAGCCGCATTCTGGGGTGATGGTACAACATCGTCGTCAGACGGACAGAACTTTCGGGTAGGCAGTCACGGACGTTAT
GCCGGTCAGGTCAATCTTAAATATGGTCAAGAACCGGGCGTGCAGATTTATACGCATATCTCAGATCAATACAGTCCGTA
CTACGCCAAAGTGATCACTCGGGTGCGCGACTCAACTCACGTGCTTGATGGCCTTCTGTACCATGAAAGCGACTTGGAAA
TTACCGAGCATTACACCGATACAGCAGGCTTTACAGAACATGTTTTTGCCCTGATGCATCTGCTGGGATTCACTTTTGCG
CCAAGGATCCGGGATCTTCATGACAAGCGGTTGTTTATTCAAGGAAATAACTGGGATTATCCGGGGCTTCAGTCCGTTAT
ATCAACAACCCGCCTGAATCTCAAAGACATTGAGGCGCACTGGGATGAAGTATTACGGCTAGCAACTTCGATAAAGCAGG
GGACAGTCACCGCATCGCTGATGATGAAAAAGTTAGCCAGTTATCCAAAACAGAACGGACTTGCCAAAGCGCTGAGAGAG
ATAGGTCGAATAGAGCGGACACTGTTTATGCTGGACTGGTTTCGAGATCCGGGTCTGCGGCAACGGGTACAGGCTGGGCT
GAATAAGGGTGAGGCCCGTAATGCCCTTGCGCGTGCGGTTTTTATGCATCGTCTGGGTGAAATCAGAGATCGGGGGCTGG
AAAATCAGAGTTACCGTGCCAGCGGACTGACGTTACTGACAGCGGCGATCACGTTATGGAACACGGTATATATAGAAAGA
GCCATTGAGTCACTGAAACGAAAAGGTGTCCCTATTAATGAACAACTAGTTGCTCATCTTTCTCCCCTGGGCTGGGAACA
TATTAATCTGAGTGGCGATTACGTTTGGCGCCATAATGTAAAGCTGGGGTCCGGAAAATATCGGCCATTACGTACAGTCA
ATACTGAATTGTACAAAAAACAGTCTTAG

Upstream 100 bases:

>100_bases
CTGGCGATATTGAGTAACCTAACTTTATCGTTACCTGAAATTATCCCCATTCAGCCGAACACTGCAAAAAGACTGCATCC
GGCATCTGCACCCCTATGCC

Downstream 100 bases:

>100_bases
CGTGGGATATTTTCCGTTTTCCAAGCGGACCCCTGCTACAACAAGGCACTCGAACAAGGCTATGAAGGTATTTGGAATCG
CAATGAAGTTGAAATAAAGC

Product: transposase Tn3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 862; Mature: 862

Protein sequence:

>862_residues
MRTDKGFMLAEEMLSWLHNNNVIFPSVDVIERTIAEIVTLSDRAVFSALTAQLENHHKSALDSLLISESDQPSRLAWLLQ
PSGKINGKNVLQHIDRLNSITALGLPDGIALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEV
IDLHERILGSLFSRAKRTQSERLQQTGKLIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRK
GNFDPLHLITEKYSTLRKYAPRMLSALQFTAAPAAQMLSDALDTITEMYRKQLRQVPPAAPTGFIPESWRKLVLTPSGID
RKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQLAVQTDCRAYLQARMTLLASRLEEVNAM
ALAGDLPDVDISDKGVKITPLENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRPKDGRPLLT
TILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNFRVGSHGRY
AGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDLEITEHYTDTAGFTEHVFALMHLLGFTFA
PRIRDLHDKRLFIQGNNWDYPGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALRE
IGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITLWNTVYIER
AIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRTVNTELYKKQS

Sequences:

>Translated_862_residues
MRTDKGFMLAEEMLSWLHNNNVIFPSVDVIERTIAEIVTLSDRAVFSALTAQLENHHKSALDSLLISESDQPSRLAWLLQ
PSGKINGKNVLQHIDRLNSITALGLPDGIALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEV
IDLHERILGSLFSRAKRTQSERLQQTGKLIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRK
GNFDPLHLITEKYSTLRKYAPRMLSALQFTAAPAAQMLSDALDTITEMYRKQLRQVPPAAPTGFIPESWRKLVLTPSGID
RKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQLAVQTDCRAYLQARMTLLASRLEEVNAM
ALAGDLPDVDISDKGVKITPLENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRPKDGRPLLT
TILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNFRVGSHGRY
AGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDLEITEHYTDTAGFTEHVFALMHLLGFTFA
PRIRDLHDKRLFIQGNNWDYPGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALRE
IGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITLWNTVYIER
AIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRTVNTELYKKQS
>Mature_862_residues
MRTDKGFMLAEEMLSWLHNNNVIFPSVDVIERTIAEIVTLSDRAVFSALTAQLENHHKSALDSLLISESDQPSRLAWLLQ
PSGKINGKNVLQHIDRLNSITALGLPDGIALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEV
IDLHERILGSLFSRAKRTQSERLQQTGKLIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRK
GNFDPLHLITEKYSTLRKYAPRMLSALQFTAAPAAQMLSDALDTITEMYRKQLRQVPPAAPTGFIPESWRKLVLTPSGID
RKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAAEFEKFRHNDQLQLAVQTDCRAYLQARMTLLASRLEEVNAM
ALAGDLPDVDISDKGVKITPLENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRPKDGRPLLT
TILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWGDGTTSSSDGQNFRVGSHGRY
AGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTHVLDGLLYHESDLEITEHYTDTAGFTEHVFALMHLLGFTFA
PRIRDLHDKRLFIQGNNWDYPGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALRE
IGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITLWNTVYIER
AIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNVKLGSGKYRPLRTVNTELYKKQS

Specific function: Required for transposition of transposon Tn2501 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 97452; Mature: 97452

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDKGFMLAEEMLSWLHNNNVIFPSVDVIERTIAEIVTLSDRAVFSALTAQLENHHKSA
CCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDSLLISESDQPSRLAWLLQPSGKINGKNVLQHIDRLNSITALGLPDGIALSVHQNRLLK
HHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEECCCCCEEEEHHHHHHHH
LAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEVIDLHERILGSLFSRAKRTQS
HHHHCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLQQTGKLIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHC
GNFDPLHLITEKYSTLRKYAPRMLSALQFTAAPAAQMLSDALDTITEMYRKQLRQVPPAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTGFIPESWRKLVLTPSGIDRKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAA
CCCCCCHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHEEHH
EFEKFRHNDQLQLAVQTDCRAYLQARMTLLASRLEEVNAMALAGDLPDVDISDKGVKITP
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEE
LENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRPKDGRPLLT
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHH
TILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWG
HHHHCCCCCCHHHHHHHCCCCCHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCEEEEC
DGTTSSSDGQNFRVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTH
CCCCCCCCCCCEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
VLDGLLYHESDLEITEHYTDTAGFTEHVFALMHLLGFTFAPRIRDLHDKRLFIQGNNWDY
HHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCC
PGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALRE
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHH
IGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRA
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
SGLTLLTAAITLWNTVYIERAIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECE
KLGSGKYRPLRTVNTELYKKQS
EECCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRTDKGFMLAEEMLSWLHNNNVIFPSVDVIERTIAEIVTLSDRAVFSALTAQLENHHKSA
CCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDSLLISESDQPSRLAWLLQPSGKINGKNVLQHIDRLNSITALGLPDGIALSVHQNRLLK
HHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEECCCCCEEEEHHHHHHHH
LAREGRKMSSRDLAKFTDVRRYATMICIITEARATLTDEVIDLHERILGSLFSRAKRTQS
HHHHCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLQQTGKLIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRVLSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHC
GNFDPLHLITEKYSTLRKYAPRMLSALQFTAAPAAQMLSDALDTITEMYRKQLRQVPPAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTGFIPESWRKLVLTPSGIDRKYYEFCVLNELKGALRSGDIWVKGSRRYRNFDDYLITAA
CCCCCCHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHEEHH
EFEKFRHNDQLQLAVQTDCRAYLQARMTLLASRLEEVNAMALAGDLPDVDISDKGVKITP
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEE
LENSVPSGVSPFADLVYGMLPHPKITEILEEVDNWTGFTRHFTHLKNNNVRPKDGRPLLT
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHH
TILADGINLGLTKMAESCPGATKSTLEGIQAWYIRDETYSAALVELVNAQKARPLAAFWG
HHHHCCCCCCHHHHHHHCCCCCHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCEEEEC
DGTTSSSDGQNFRVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPYYAKVITRVRDSTH
CCCCCCCCCCCEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
VLDGLLYHESDLEITEHYTDTAGFTEHVFALMHLLGFTFAPRIRDLHDKRLFIQGNNWDY
HHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCC
PGLQSVISTTRLNLKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALRE
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHH
IGRIERTLFMLDWFRDPGLRQRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRA
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
SGLTLLTAAITLWNTVYIERAIESLKRKGVPINEQLVAHLSPLGWEHINLSGDYVWRHNV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEEECE
KLGSGKYRPLRTVNTELYKKQS
EECCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2827105; 3027041 [H]