| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126174351
Identifier: 126174351
GI number: 126174351
Start: 2478220
End: 2479389
Strand: Direct
Name: 126174351
Synonym: Sbal_2134
Alternate gene names: NA
Gene position: 2478220-2479389 (Clockwise)
Preceding gene: 126174349
Following gene: 126174352
Centisome position: 48.33
GC content: 44.44
Gene sequence:
>1170_bases ATGGCGAAGATCAGTAACCGGTTCTGGTTTATGTTGCACGGTTGGGTGTCGCTCCCAATATGGTTGTTATTTTGTTTTAT CTGTTTGACGGGCACGATTGCGGTATTAAGTCATGAGATCACTTGGCTCACGAATCCTGCATCCAGAGCATTGAATCCTA ATGATTTACCGGAGAAACCAGTCAGCGAGTTGATGACAATTGTTGAGACAGCCTACCCAAGTGCGGCGGTTACTGGCGCT ATGACTTTAGAGCCATATTTGGTGAATGTGGTGATGTTCAGTGATGCGGATAAGCCCTTTGCCATGGCCTATGTGAATCA ATACACAGGTGAGATCCAACAGATCAATGAAGGTATGACCTTTGTGGGCTTTATCAGATCGTTACATGCATGGTTACTAT TTCCCTGGCAAAGCAGTTACAGCCTTGGCTATTACCTCGTATGTTCGATGGCGCTGTTCATGCTCGCGTCTTTAGTCACT GGATTGATTGTCTATAAACGTTTTTGGCGGAGTTTGTTTGCACCTAAGCTGCAACTCAATCAAGGAAAAAAAACGTTATT AGCAGATTTACATAAATTGTCCGGTGTTTGGTCTATTTGGTTTATCGCCATTATGGCCGTGACAGGATTATGGTATCTAG TCCAAGCCATTTTTTGGCATGCAGATATTGATATTGAACCCCATGCGCCATTAGTCGCGGCAGAACAATTACCTTTCGTC CAAAAGAGTGACGCGAAGCCAGCAGTGCCGAACGTGTCACTTACACAAGCCCTAACGTTAGCGCAAACACGCTTTCCAGA TTTTCAGCCAAGTTATGTAATGCAACCAGAGCACAATCGAGACATGTATCATCTGAGCGGTAGCGGCGATCATATTTTCT ACGATCAGTATTCATATAACCTCAGTATTAATCCTTGGACAGGGGAGGTTGCCAGTGCCACATCACCCGGGACTATGACG GGCATGCAAACCCTAATGCATATCGCAGATCCCTTACATTACGGCACCTTAGGCGGCATTTGGACAAAAATAATTTGGTT TATTTTTGGGTTAATTCTATCGGGTATGTCAATTACAGGATTTATGATGTGGGGATTACGCAATCTGCGGGCATTTAAAA ATGCAAGCGTTCCAAACACTGCGACTGACCTGTTAGAGGAGGGATGTTAA
Upstream 100 bases:
>100_bases CCGGCATTCTAATTGAAAACAATTACCGGTACATCGTATTGATAACAATTTGCATTACCTTTACACTCTCGACATTAGAT AAGTGTTAGGAAAGTCACAA
Downstream 100 bases:
>100_bases TGGCTGTTACTAACTCAAGCTTCTGGCTAAAAAACAAATATAAACTCAGTGGGTTAATTCTATTTCTACCGCTATTGTTT CTATATCAGTCGTTAACACC
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix; Peptidase; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Membrane-Bound Protein; PepSY-Associated Membrane Protein; Transmembrane Protein; NB-Dependent Receptor Plug; Cytoplasmic Membrane Protein; PepSY-Associated TM Helix Family Protein; Aspartate Kinase; Amino Acid Carrier Family Protein; Iron-Regulated Transmembrane Protein; Sulfite Reductase Flavoprotein Component
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MAKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKPVSELMTIVETAYPSAAVTGA MTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMTFVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVT GLIVYKRFWRSLFAPKLQLNQGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV QKSDAKPAVPNVSLTQALTLAQTRFPDFQPSYVMQPEHNRDMYHLSGSGDHIFYDQYSYNLSINPWTGEVASATSPGTMT GMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITGFMMWGLRNLRAFKNASVPNTATDLLEEGC
Sequences:
>Translated_389_residues MAKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKPVSELMTIVETAYPSAAVTGA MTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMTFVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVT GLIVYKRFWRSLFAPKLQLNQGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV QKSDAKPAVPNVSLTQALTLAQTRFPDFQPSYVMQPEHNRDMYHLSGSGDHIFYDQYSYNLSINPWTGEVASATSPGTMT GMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITGFMMWGLRNLRAFKNASVPNTATDLLEEGC >Mature_388_residues AKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKPVSELMTIVETAYPSAAVTGAM TLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMTFVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVTG LIVYKRFWRSLFAPKLQLNQGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFVQ KSDAKPAVPNVSLTQALTLAQTRFPDFQPSYVMQPEHNRDMYHLSGSGDHIFYDQYSYNLSINPWTGEVASATSPGTMTG MQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITGFMMWGLRNLRAFKNASVPNTATDLLEEGC
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43764; Mature: 43633
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKP CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCCCCCHH VSELMTIVETAYPSAAVTGAMTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMT HHHHHHHHHHCCCCHHHCCCEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCH FVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVTGLIVYKRFWRSLFAPKLQLN HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHCCCC QKSDAKPAVPNVSLTQALTLAQTRFPDFQPSYVMQPEHNRDMYHLSGSGDHIFYDQYSYN CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCEEEEEEEEEE LSINPWTGEVASATSPGTMTGMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITG EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHH FMMWGLRNLRAFKNASVPNTATDLLEEGC HHHHHHHHHHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure AKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKP CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCCCCCHH VSELMTIVETAYPSAAVTGAMTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMT HHHHHHHHHHCCCCHHHCCCEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCH FVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVTGLIVYKRFWRSLFAPKLQLN HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHCCCC QKSDAKPAVPNVSLTQALTLAQTRFPDFQPSYVMQPEHNRDMYHLSGSGDHIFYDQYSYN CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCEEEEEEEEEE LSINPWTGEVASATSPGTMTGMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITG EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHH FMMWGLRNLRAFKNASVPNTATDLLEEGC HHHHHHHHHHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA