| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is cmk
Identifier: 126174290
GI number: 126174290
Start: 2402342
End: 2403034
Strand: Direct
Name: cmk
Synonym: Sbal_2069
Alternate gene names: 126174290
Gene position: 2402342-2403034 (Clockwise)
Preceding gene: 126174289
Following gene: 126174291
Centisome position: 46.85
GC content: 47.76
Gene sequence:
>693_bases ATGTCTGAACGGGCTCCTGTAGTCACAATCGACGGCCCAAGTGGTGCTGGCAAAGGTACAATTAGTCAATTATTGGCTCA GCATCTAGGTTGGCAACTACTTGATAGTGGTGCTATTTACCGAGTTCTTGCGCTCGCAGCAATTCATCATAACGTTGAAC TGGAAAATGAAGAATCTATCACGCTGTTAGCGGCACATCTCGATGTGAAGTTTTTAACAGGCAATGATACCGATCCGGTT CAAGTGATATTGGAAGGTGAAGACGTCACCACCGACATTCGCACTCAAGAGTGCTCGAATGCCGCTTCAAAAGTCGCCGC GTTTCCACGGGTGAGAGAAGCGTTATTACGTCGTCAACGGGCCTTTAAAACGGCGCCAGGATTAATTGCCGATGGTCGCG ACATGGGAACTGTGGTTTTCCCAAGTGCGCCGGCAAAATTATATTTAACCGCCTCAGCTGAAGAGCGTGCCCAAAGACGC TATAATCAGTTGCAGGACAAGGGCTTCGATGTTAATATCGAGCGCCTTTTAAGTGAAATTATCGAACGTGATGACCGCGA TATGAATCGTCCGGTGGCTCCTTTAGTCCCCGCCGAGGACGCGCTCATTATCGATACAAGCGGAAAGGGTATTGATGAAG TGTTAGCGCTTGCGCTTAACTTTATCAACCAAAAATTATCCGACACTAACTAG
Upstream 100 bases:
>100_bases ACGGATTTTGTTTGTCTTTTGTTGTACAATGCTGCGCGCTCATTTTCGGGGGCTCACTTGATGAACTCACGGATGATGGT TATTTTTTGCGGAGGAATGT
Downstream 100 bases:
>100_bases TTAGCCCACCGGATAGGTATTCGTATTAAGGATGATACGGATAATTTGACTGACTCCACGTCTAGGACGGACAGTGGTTT AATAAAGAAAGTAACCTAAA
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSERAPVVTIDGPSGAGKGTISQLLAQHLGWQLLDSGAIYRVLALAAIHHNVELENEESITLLAAHLDVKFLTGNDTDPV QVILEGEDVTTDIRTQECSNAASKVAAFPRVREALLRRQRAFKTAPGLIADGRDMGTVVFPSAPAKLYLTASAEERAQRR YNQLQDKGFDVNIERLLSEIIERDDRDMNRPVAPLVPAEDALIIDTSGKGIDEVLALALNFINQKLSDTN
Sequences:
>Translated_230_residues MSERAPVVTIDGPSGAGKGTISQLLAQHLGWQLLDSGAIYRVLALAAIHHNVELENEESITLLAAHLDVKFLTGNDTDPV QVILEGEDVTTDIRTQECSNAASKVAAFPRVREALLRRQRAFKTAPGLIADGRDMGTVVFPSAPAKLYLTASAEERAQRR YNQLQDKGFDVNIERLLSEIIERDDRDMNRPVAPLVPAEDALIIDTSGKGIDEVLALALNFINQKLSDTN >Mature_229_residues SERAPVVTIDGPSGAGKGTISQLLAQHLGWQLLDSGAIYRVLALAAIHHNVELENEESITLLAAHLDVKFLTGNDTDPVQ VILEGEDVTTDIRTQECSNAASKVAAFPRVREALLRRQRAFKTAPGLIADGRDMGTVVFPSAPAKLYLTASAEERAQRRY NQLQDKGFDVNIERLLSEIIERDDRDMNRPVAPLVPAEDALIIDTSGKGIDEVLALALNFINQKLSDTN
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=227, Percent_Identity=65.6387665198238, Blast_Score=306, Evalue=8e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_SHEB2 (B8EA96)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002357992.1 - ProteinModelPortal: B8EA96 - SMR: B8EA96 - GeneID: 7088358 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_2065 - HOGENOM: HBG354377 - OMA: DIGTVIC - ProtClustDB: PRK00023 - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 25094; Mature: 24963
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERAPVVTIDGPSGAGKGTISQLLAQHLGWQLLDSGAIYRVLALAAIHHNVELENEESI CCCCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCE TLLAAHLDVKFLTGNDTDPVQVILEGEDVTTDIRTQECSNAASKVAAFPRVREALLRRQR EEEEEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFKTAPGLIADGRDMGTVVFPSAPAKLYLTASAEERAQRRYNQLQDKGFDVNIERLLSEI HHHCCCCCEECCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHH IERDDRDMNRPVAPLVPAEDALIIDTSGKGIDEVLALALNFINQKLSDTN HHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SERAPVVTIDGPSGAGKGTISQLLAQHLGWQLLDSGAIYRVLALAAIHHNVELENEESI CCCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCE TLLAAHLDVKFLTGNDTDPVQVILEGEDVTTDIRTQECSNAASKVAAFPRVREALLRRQR EEEEEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFKTAPGLIADGRDMGTVVFPSAPAKLYLTASAEERAQRRYNQLQDKGFDVNIERLLSEI HHHCCCCCEECCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHH IERDDRDMNRPVAPLVPAEDALIIDTSGKGIDEVLALALNFINQKLSDTN HHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA