Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is cphE [H]
Identifier: 126174211
GI number: 126174211
Start: 2306198
End: 2307823
Strand: Direct
Name: cphE [H]
Synonym: Sbal_1987
Alternate gene names: 126174211
Gene position: 2306198-2307823 (Clockwise)
Preceding gene: 126174206
Following gene: 126174214
Centisome position: 44.98
GC content: 45.57
Gene sequence:
>1626_bases ATGGAAATCTGCAGCTCTCAAGCTCCCGCAAATTGCCAATCGGAAGTCAAATTCTCAGCCGATGCCAAACGCGAAACACG TTATGTATTCAACGTTTCGTGGCTTGAACGTGCACTTAAACACCCAAGATTGCAGTCGTTAAATGAGCAACAAAAAGTGA TATTACGACAAGCGGCCAAAGCACTTTCTCCTGTCAGTAATAGTCTTGAAAATAGCGATGTTGAAATTGGCCGTTCACTT GGCCGTTTACATAGTGACAGCTTAACCTTGGCAAAGCTTGAACAAGCCATTGCAAAGATAGATAAGCAATTTCTGGCGCA TTTGAGCGACCAACAATATTACGCACTGCTAGATTTATTAGAAGAAAAGCAAATGCTTGCTGACGGCACGCTGTTACAAG AACAAGTGTTACTTGATTCCACAACCAATCCCCATGCCGCGACGCTTTATCAATTATTTACGCAGCAAGCGTTGGCAAAG CGCCAGCAAAGCAACCCCAATGCCAAACGTCCACTGATCGCCGTTGTGACCGCATCTGCGCGCGATCCCTTTGAAGCGGC CCATTACTATGTCAGCGTATTTGAGCAAATAGGGGCCGAGGTTATTTGGCTGCCTTTAGATGCAGCACTGCAAGCGGGTA TCGCTACCCGTCAATGTGAGCAACTCGAAATGTTTAGACAGCAAATACAAGGTAATACGGATAGGGCGAGGCTTTATCCA AAGCAAGTTGAGCTACAAAAGGATTTCTGTGCCAGCCCCATTAAACTCTATCAATTGCTTAATCAAATCGACGGACTCTT TTTAAATGGCGGCGATCAGAGTTTGACTTTAAAGGCTTGGACGACGCCGGATGAATCACCCAGTGAAGCATTAAACATCA TCAAGAAACGTCTTTCCAAACAAGAAATTGTTATCGGTGGCACCAGCGCTGGCACTGCTGTGATGGCTGATAAAAATATG ATCACCGGTGGCACAAGTGAGGGGGCATTGAGTTTTGGCATTTTCGCGACCGAGGCGCCAAGTGAGCGTTGTGAAGTCGC TAATTGTGATGCCTCAGTTCCTGCAACGGCGGTCACTTATCGCGAGCAAGGTGGGCTTGGATTTTTCCCCTTTGGTATAC CCGACACACACTTTTCACAACGAGACCGTTATTTAAGACTCTTGCTCCTTAGCGCCAATGCCGATAGCAAAATGGCATTT GGGGTCGATGAAAATACAGCATTATTGGTCGATTTATCACATCGTTCGCTCTCAGTGGTCGGTGAGCATGGAGTATGGGC ATTAGCGCAAGTTGAGCGATTGAAACAAAGCCAAGCTAACTCTGAAATAAATGCGATTTCGCACTATCTCACTCCGGGTT CCTATGCTGAAATTGACGCCACTGGTGAGCATTTGACTCATATCCGCCTAGCTCAGACTGCCAAATTGACGCCAATAATG AGTAAGCAGAGTGACTTTTTTACTTGGGTCAGCAATGCGTGCCGGCAAGGTATATATTCAACATCACTGAGTGATAAGTA CGAATTAACTATTTCTCCAATGGCGGCATTAAGCTGCCAAGGTATTTTAAATCAAGAACACGGATATCAATCGATGGGGT TAACACTAAAAGCGTTAGAACAATGA
Upstream 100 bases:
>100_bases GCTATTTATCGCCCCAAGCGTGCAGTCAGCGCCAGCGAAAACCCTGAGTTTATCGATACCCACTCATCAACAATTTGATC TTATGCTGGTGGGCGGAGGG
Downstream 100 bases:
>100_bases CAGTGAGTTGAATTAATTGTAGTGGTATGGCTATGATATCAATAGGATAGGCTAAATTGATTAAGATTGAGTGTATATTA GATAGATTTTAAAACGTGAG
Product: cyanophycinase-related exopeptidase-like protein
Products: NA
Alternate protein names: Extracellular CGPase; CPHEpa; Extracellular cyanophycinase [H]
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MEICSSQAPANCQSEVKFSADAKRETRYVFNVSWLERALKHPRLQSLNEQQKVILRQAAKALSPVSNSLENSDVEIGRSL GRLHSDSLTLAKLEQAIAKIDKQFLAHLSDQQYYALLDLLEEKQMLADGTLLQEQVLLDSTTNPHAATLYQLFTQQALAK RQQSNPNAKRPLIAVVTASARDPFEAAHYYVSVFEQIGAEVIWLPLDAALQAGIATRQCEQLEMFRQQIQGNTDRARLYP KQVELQKDFCASPIKLYQLLNQIDGLFLNGGDQSLTLKAWTTPDESPSEALNIIKKRLSKQEIVIGGTSAGTAVMADKNM ITGGTSEGALSFGIFATEAPSERCEVANCDASVPATAVTYREQGGLGFFPFGIPDTHFSQRDRYLRLLLLSANADSKMAF GVDENTALLVDLSHRSLSVVGEHGVWALAQVERLKQSQANSEINAISHYLTPGSYAEIDATGEHLTHIRLAQTAKLTPIM SKQSDFFTWVSNACRQGIYSTSLSDKYELTISPMAALSCQGILNQEHGYQSMGLTLKALEQ
Sequences:
>Translated_541_residues MEICSSQAPANCQSEVKFSADAKRETRYVFNVSWLERALKHPRLQSLNEQQKVILRQAAKALSPVSNSLENSDVEIGRSL GRLHSDSLTLAKLEQAIAKIDKQFLAHLSDQQYYALLDLLEEKQMLADGTLLQEQVLLDSTTNPHAATLYQLFTQQALAK RQQSNPNAKRPLIAVVTASARDPFEAAHYYVSVFEQIGAEVIWLPLDAALQAGIATRQCEQLEMFRQQIQGNTDRARLYP KQVELQKDFCASPIKLYQLLNQIDGLFLNGGDQSLTLKAWTTPDESPSEALNIIKKRLSKQEIVIGGTSAGTAVMADKNM ITGGTSEGALSFGIFATEAPSERCEVANCDASVPATAVTYREQGGLGFFPFGIPDTHFSQRDRYLRLLLLSANADSKMAF GVDENTALLVDLSHRSLSVVGEHGVWALAQVERLKQSQANSEINAISHYLTPGSYAEIDATGEHLTHIRLAQTAKLTPIM SKQSDFFTWVSNACRQGIYSTSLSDKYELTISPMAALSCQGILNQEHGYQSMGLTLKALEQ >Mature_541_residues MEICSSQAPANCQSEVKFSADAKRETRYVFNVSWLERALKHPRLQSLNEQQKVILRQAAKALSPVSNSLENSDVEIGRSL GRLHSDSLTLAKLEQAIAKIDKQFLAHLSDQQYYALLDLLEEKQMLADGTLLQEQVLLDSTTNPHAATLYQLFTQQALAK RQQSNPNAKRPLIAVVTASARDPFEAAHYYVSVFEQIGAEVIWLPLDAALQAGIATRQCEQLEMFRQQIQGNTDRARLYP KQVELQKDFCASPIKLYQLLNQIDGLFLNGGDQSLTLKAWTTPDESPSEALNIIKKRLSKQEIVIGGTSAGTAVMADKNM ITGGTSEGALSFGIFATEAPSERCEVANCDASVPATAVTYREQGGLGFFPFGIPDTHFSQRDRYLRLLLLSANADSKMAF GVDENTALLVDLSHRSLSVVGEHGVWALAQVERLKQSQANSEINAISHYLTPGSYAEIDATGEHLTHIRLAQTAKLTPIM SKQSDFFTWVSNACRQGIYSTSLSDKYELTISPMAALSCQGILNQEHGYQSMGLTLKALEQ
Specific function: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides [H]
COG id: COG4242
COG function: function code QP; Cyanophycinase and related exopeptidases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S51 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005320 - InterPro: IPR011811 [H]
Pfam domain/function: PF03575 Peptidase_S51 [H]
EC number: =3.4.15.6 [H]
Molecular weight: Translated: 59632; Mature: 59632
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEICSSQAPANCQSEVKFSADAKRETRYVFNVSWLERALKHPRLQSLNEQQKVILRQAAK CCCCCCCCCCCCHHCCEECCCCCCCCEEEEEHHHHHHHHCCCHHHCCCHHHHHHHHHHHH ALSPVSNSLENSDVEIGRSLGRLHSDSLTLAKLEQAIAKIDKQFLAHLSDQQYYALLDLL HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH EEKQMLADGTLLQEQVLLDSTTNPHAATLYQLFTQQALAKRQQSNPNAKRPLIAVVTASA HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC RDPFEAAHYYVSVFEQIGAEVIWLPLDAALQAGIATRQCEQLEMFRQQIQGNTDRARLYP CCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCH KQVELQKDFCASPIKLYQLLNQIDGLFLNGGDQSLTLKAWTTPDESPSEALNIIKKRLSK HHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCC QEIVIGGTSAGTAVMADKNMITGGTSEGALSFGIFATEAPSERCEVANCDASVPATAVTY CEEEEECCCCCCEEEECCCEECCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCEEEEE REQGGLGFFPFGIPDTHFSQRDRYLRLLLLSANADSKMAFGVDENTALLVDLSHRSLSVV ECCCCCEEECCCCCCCCHHHHHHEEEEEEEECCCCCCEEECCCCCCEEEEEECCCCEEEE GEHGVWALAQVERLKQSQANSEINAISHYLTPGSYAEIDATGEHLTHIRLAQTAKLTPIM CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCHHH SKQSDFFTWVSNACRQGIYSTSLSDKYELTISPMAALSCQGILNQEHGYQSMGLTLKALE CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHCCCHHHHC Q C >Mature Secondary Structure MEICSSQAPANCQSEVKFSADAKRETRYVFNVSWLERALKHPRLQSLNEQQKVILRQAAK CCCCCCCCCCCCHHCCEECCCCCCCCEEEEEHHHHHHHHCCCHHHCCCHHHHHHHHHHHH ALSPVSNSLENSDVEIGRSLGRLHSDSLTLAKLEQAIAKIDKQFLAHLSDQQYYALLDLL HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH EEKQMLADGTLLQEQVLLDSTTNPHAATLYQLFTQQALAKRQQSNPNAKRPLIAVVTASA HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC RDPFEAAHYYVSVFEQIGAEVIWLPLDAALQAGIATRQCEQLEMFRQQIQGNTDRARLYP CCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCH KQVELQKDFCASPIKLYQLLNQIDGLFLNGGDQSLTLKAWTTPDESPSEALNIIKKRLSK HHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCC QEIVIGGTSAGTAVMADKNMITGGTSEGALSFGIFATEAPSERCEVANCDASVPATAVTY CEEEEECCCCCCEEEECCCEECCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCEEEEE REQGGLGFFPFGIPDTHFSQRDRYLRLLLLSANADSKMAFGVDENTALLVDLSHRSLSVV ECCCCCEEECCCCCCCCHHHHHHEEEEEEEECCCCCCEEECCCCCCEEEEEECCCCEEEE GEHGVWALAQVERLKQSQANSEINAISHYLTPGSYAEIDATGEHLTHIRLAQTAKLTPIM CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCHHH SKQSDFFTWVSNACRQGIYSTSLSDKYELTISPMAALSCQGILNQEHGYQSMGLTLKALE CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHCCCHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11986309 [H]