Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126174206
Identifier: 126174206
GI number: 126174206
Start: 2297440
End: 2298453
Strand: Direct
Name: 126174206
Synonym: Sbal_1982
Alternate gene names: NA
Gene position: 2297440-2298453 (Clockwise)
Preceding gene: 126174205
Following gene: 126174211
Centisome position: 44.81
GC content: 46.25
Gene sequence:
>1014_bases ATGAAACAAGTTATTTTATTACTGCTGATATCCAGTTTTCTCAGTGGGTGTAGTGCTCATTCAACAACACCAGACCCGCT CAGTTTGTACCGCGAGTTGACCCGCGATAAATCGCAATTAGATGTGCGTATTGGGGCGGCGAATCAATACAGCGGTTCCG AGAAAATCTGTTTAGATGCGAAGTGCGATGCTGATGGCAATAACTGCAAGCCCATCACTGTGCCCGCACCCAGCCCATTG ATGACCAATAGTGATGACCAAAACTATTATCAGCTCACGCAGGATAGTGCAGGTTTTTCTCACTATGGTGCGCAATCCCA GTATGCCACTGATATTGAAACCTTGCGCAAACGGTTAGATGATTTGATGTGGTCCTTTAAAAAAAGCGGCTTAATCGATG CACTCAAACAGCAGAAAAAAACGCCAGCATTGATGTTTGATATTGATAATACACTGGAGTTTAGCGCTGCAATTGATTCC GACCCAACGGGCAAGGGGCCAGCAATTCAGGGCATGGTTGATTTTGCGAAACAATGGTGTTTTAAAGACGGTGTTGATTG TTATTTTGTCACGGCCCGTAATTGTGAAAACCAAAGTGCTAAACCCACTCAGTATTGGCTTGAAAATAACATGGGCCTTG ATGCTAAGGTCGTAGATAGGTTCACCTATTTTTCACGCAACACTAAACAACTGGTGTGCAGCAATTTACCCACACCAGCA CCCAATGTTGCATATAAAGATATTGTGCGCGAGGCGCTGGAAGCTGAACGGAAGGTATTTTGGCTAATGAGTATCGGCGA CCAACTAACCGACTCTTTGGGTGAACACAGTGGTTTGAAGGTGCGGGTTCCGAATCAGTTCTTCCATGCGGACATTAACC CCAACCAGTTTGCGACTTACGGTGCGGGACGTTGCGGCCCCCTAGAGACGATTGCGCCACCATCGGAATGCAGTATTGGA TTAAAACCACAGGCACTCGCTGTAACCAACATCAACTACTGCCGCTCACAATAA
Upstream 100 bases:
>100_bases TTTCGTTTATTGAGTCATTAACCGGCTTTTAATCGCCGGTAAAGAACCGCGTGCTCAATCGGCGCGGTTTTCACTATCAC TCTGTTATCGGAGTATCACG
Downstream 100 bases:
>100_bases GATAACTGACGTTGTCCCTGTGAACTCACTTGGATGGATTCAAGAAGATAATTAACTCAGCTATGCTGATGCAATAACTT GCAAGCTCGCCGTCGCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKQVILLLLISSFLSGCSAHSTTPDPLSLYRELTRDKSQLDVRIGAANQYSGSEKICLDAKCDADGNNCKPITVPAPSPL MTNSDDQNYYQLTQDSAGFSHYGAQSQYATDIETLRKRLDDLMWSFKKSGLIDALKQQKKTPALMFDIDNTLEFSAAIDS DPTGKGPAIQGMVDFAKQWCFKDGVDCYFVTARNCENQSAKPTQYWLENNMGLDAKVVDRFTYFSRNTKQLVCSNLPTPA PNVAYKDIVREALEAERKVFWLMSIGDQLTDSLGEHSGLKVRVPNQFFHADINPNQFATYGAGRCGPLETIAPPSECSIG LKPQALAVTNINYCRSQ
Sequences:
>Translated_337_residues MKQVILLLLISSFLSGCSAHSTTPDPLSLYRELTRDKSQLDVRIGAANQYSGSEKICLDAKCDADGNNCKPITVPAPSPL MTNSDDQNYYQLTQDSAGFSHYGAQSQYATDIETLRKRLDDLMWSFKKSGLIDALKQQKKTPALMFDIDNTLEFSAAIDS DPTGKGPAIQGMVDFAKQWCFKDGVDCYFVTARNCENQSAKPTQYWLENNMGLDAKVVDRFTYFSRNTKQLVCSNLPTPA PNVAYKDIVREALEAERKVFWLMSIGDQLTDSLGEHSGLKVRVPNQFFHADINPNQFATYGAGRCGPLETIAPPSECSIG LKPQALAVTNINYCRSQ >Mature_337_residues MKQVILLLLISSFLSGCSAHSTTPDPLSLYRELTRDKSQLDVRIGAANQYSGSEKICLDAKCDADGNNCKPITVPAPSPL MTNSDDQNYYQLTQDSAGFSHYGAQSQYATDIETLRKRLDDLMWSFKKSGLIDALKQQKKTPALMFDIDNTLEFSAAIDS DPTGKGPAIQGMVDFAKQWCFKDGVDCYFVTARNCENQSAKPTQYWLENNMGLDAKVVDRFTYFSRNTKQLVCSNLPTPA PNVAYKDIVREALEAERKVFWLMSIGDQLTDSLGEHSGLKVRVPNQFFHADINPNQFATYGAGRCGPLETIAPPSECSIG LKPQALAVTNINYCRSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37362; Mature: 37362
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVILLLLISSFLSGCSAHSTTPDPLSLYRELTRDKSQLDVRIGAANQYSGSEKICLDA CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE KCDADGNNCKPITVPAPSPLMTNSDDQNYYQLTQDSAGFSHYGAQSQYATDIETLRKRLD ECCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH DLMWSFKKSGLIDALKQQKKTPALMFDIDNTLEFSAAIDSDPTGKGPAIQGMVDFAKQWC HHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH FKDGVDCYFVTARNCENQSAKPTQYWLENNMGLDAKVVDRFTYFSRNTKQLVCSNLPTPA HHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCC PNVAYKDIVREALEAERKVFWLMSIGDQLTDSLGEHSGLKVRVPNQFFHADINPNQFATY CCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCEEEC GAGRCGPLETIAPPSECSIGLKPQALAVTNINYCRSQ CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCC >Mature Secondary Structure MKQVILLLLISSFLSGCSAHSTTPDPLSLYRELTRDKSQLDVRIGAANQYSGSEKICLDA CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE KCDADGNNCKPITVPAPSPLMTNSDDQNYYQLTQDSAGFSHYGAQSQYATDIETLRKRLD ECCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH DLMWSFKKSGLIDALKQQKKTPALMFDIDNTLEFSAAIDSDPTGKGPAIQGMVDFAKQWC HHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH FKDGVDCYFVTARNCENQSAKPTQYWLENNMGLDAKVVDRFTYFSRNTKQLVCSNLPTPA HHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCC PNVAYKDIVREALEAERKVFWLMSIGDQLTDSLGEHSGLKVRVPNQFFHADINPNQFATY CCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCEEEC GAGRCGPLETIAPPSECSIGLKPQALAVTNINYCRSQ CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA