| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is cfp30B [H]
Identifier: 126173921
GI number: 126173921
Start: 1971421
End: 1971801
Strand: Reverse
Name: cfp30B [H]
Synonym: Sbal_1690
Alternate gene names: 126173921
Gene position: 1971801-1971421 (Counterclockwise)
Preceding gene: 126173925
Following gene: 126173920
Centisome position: 38.46
GC content: 46.72
Gene sequence:
>381_bases ATGGAATCGGCTTTTAATACTGCAGGGGCGTTAAGTTGGCATGAACTCACAACCAATAATACCGAAGAGGCCATGCGCTT CTATGCTGAGATTTTTGGCTGGCACTTTAAAACCGTCAAAATGCCCCACGGTCACTATCACATTATTGAAAACGAGGGGA TCAGCATTGGCGGAATTACCGACAGTTTAATCCCCACCCTTCCCTCACATTGGACTGGCTATATTACGGTTAACGATGTG GATCAAGTGGCTATCAGTGCCAAAAAACTCGGCGGTGACATTCTGTTTGGCCCTGAAGACATTCCAGAGGTGGGCCGTTT TTGTTGGATAAAAGACCCACAGGGCGCCATTATTGCGGCCATTAGCTATTTAAAACGCTGA
Upstream 100 bases:
>100_bases ATAAAGGCCTTCAACAAAAGCCTTAAATACAGGCCTTAACACAGCCACTGAACATCGGCTCAAATACAAAAGTTAACCAC AATAAATTAGGGATGCGCTT
Downstream 100 bases:
>100_bases TGTAAAAACTGACCTGAACATGATGATGAGTTTCGACTCAAGGGATACGCCGCAGGTTGATACAGATGTAGCTATCAATG TAGAAGATAGGTTGTCACTC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MESAFNTAGALSWHELTTNNTEEAMRFYAEIFGWHFKTVKMPHGHYHIIENEGISIGGITDSLIPTLPSHWTGYITVNDV DQVAISAKKLGGDILFGPEDIPEVGRFCWIKDPQGAIIAAISYLKR
Sequences:
>Translated_126_residues MESAFNTAGALSWHELTTNNTEEAMRFYAEIFGWHFKTVKMPHGHYHIIENEGISIGGITDSLIPTLPSHWTGYITVNDV DQVAISAKKLGGDILFGPEDIPEVGRFCWIKDPQGAIIAAISYLKR >Mature_126_residues MESAFNTAGALSWHELTTNNTEEAMRFYAEIFGWHFKTVKMPHGHYHIIENEGISIGGITDSLIPTLPSHWTGYITVNDV DQVAISAKKLGGDILFGPEDIPEVGRFCWIKDPQGAIIAAISYLKR
Specific function: Unknown
COG id: COG3324
COG function: function code R; Predicted enzyme related to lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14018; Mature: 14018
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESAFNTAGALSWHELTTNNTEEAMRFYAEIFGWHFKTVKMPHGHYHIIENEGISIGGIT CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEECCCC DSLIPTLPSHWTGYITVNDVDQVAISAKKLGGDILFGPEDIPEVGRFCWIKDPQGAIIAA HHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCHHHHH ISYLKR HHHHCC >Mature Secondary Structure MESAFNTAGALSWHELTTNNTEEAMRFYAEIFGWHFKTVKMPHGHYHIIENEGISIGGIT CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEECCCC DSLIPTLPSHWTGYITVNDVDQVAISAKKLGGDILFGPEDIPEVGRFCWIKDPQGAIIAA HHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCHHHHH ISYLKR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]