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The map label for this gene is sapC [H]

Identifier: 126173847

GI number: 126173847

Start: 1884838

End: 1885728

Strand: Reverse

Name: sapC [H]

Synonym: Sbal_1613

Alternate gene names: 126173847

Gene position: 1885728-1884838 (Counterclockwise)

Preceding gene: 126173848

Following gene: 126173846

Centisome position: 36.78

GC content: 50.84

Gene sequence:

>891_bases
ATGCCACCAGTTAAAATTTATCAAGAAGATCAGATTGCCTCCCCGACTATGCGGGTTTGGCTTAACTTTTCGGCTAATCC
TTTCGCCTTGGCAGGTCTGTGGACGATTGCTTTCCTGCTCTTGCTAACGCTATTTGGTCCTATGATTGCGCCCTTCCCAC
CAGAGGCACAAGATCCCAGAGCCTTGCTATTGCCGCCCTCTTGGGATCCCTCAGGCACTGTGGCACACTTTTTAGGGACA
GACGATCTCGGCCGCGATATCTTCAGCCGATTATTACACGGCGCGCACTTGACCTTTGGTATGGCGCTGCTGATCGTCGT
CACCGCATTATTCACAGGCTTTATCATAGGGTCACTGTCCGGCATGATGCGGGGCTTAAAATCTAGTATTCTCGGGCACT
TACTCGATGCATTGTTATCAATCCCTTCATTATTGATGGCCATTTTAGTGGTGGCGGTAATGGGGCCAGGGCTTGAAAAT
GTGTTCTGGGCCGTCGGAATTGCGTTAACCCCGCAATTTGTGCGCTCGATACACCAGTCAGTGCATGAAGAGTTGCAAAA
AGAATACGTCACAGCGGCGCGTTTAGATGGCGCGAACTCGATGCAAATTTTTTGGTATGTCATCATGCCAAACGTGTGGG
AAGTGGTGATCATTCAAACCACACTTGCCATTTCGGCCGCCATTTTAGATATCGCCGCCCTCGGTTTTTTAAGCTTGGGC
GCGCAGGCACCAAGCCCTGAATGGGGCGCTATGGTCGCCCAAGGTATGGATAATTTATTAACGGCGCCTTGGGCTGTGAC
TATCCCGGGCTTAGCGATTCTTTTCAGTGTGCTTTCCATTAACTTGGTTGGCGATGGCCTACGGTCGGCGCTTGCGCCCA
TCAGAAACTAA

Upstream 100 bases:

>100_bases
CAAGGTGGTATTTTGGCCGTAGCCCTATTAATTATCTTCCTAAGTATCTTGATTGAAGTGCTGCATACAGTCTTTAATCC
ACTGAGCAGAAAAGACCTTT

Downstream 100 bases:

>100_bases
CTTATGCCTTTACTCGACGTACGAAATCTCACGATTGAACTCGATACGCCCCACGGTAGAGTGCGGGCGCTCGAAAAAGT
TAGCTTAACGCTCAATGCCG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; peptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPPVKIYQEDQIASPTMRVWLNFSANPFALAGLWTIAFLLLLTLFGPMIAPFPPEAQDPRALLLPPSWDPSGTVAHFLGT
DDLGRDIFSRLLHGAHLTFGMALLIVVTALFTGFIIGSLSGMMRGLKSSILGHLLDALLSIPSLLMAILVVAVMGPGLEN
VFWAVGIALTPQFVRSIHQSVHEELQKEYVTAARLDGANSMQIFWYVIMPNVWEVVIIQTTLAISAAILDIAALGFLSLG
AQAPSPEWGAMVAQGMDNLLTAPWAVTIPGLAILFSVLSINLVGDGLRSALAPIRN

Sequences:

>Translated_296_residues
MPPVKIYQEDQIASPTMRVWLNFSANPFALAGLWTIAFLLLLTLFGPMIAPFPPEAQDPRALLLPPSWDPSGTVAHFLGT
DDLGRDIFSRLLHGAHLTFGMALLIVVTALFTGFIIGSLSGMMRGLKSSILGHLLDALLSIPSLLMAILVVAVMGPGLEN
VFWAVGIALTPQFVRSIHQSVHEELQKEYVTAARLDGANSMQIFWYVIMPNVWEVVIIQTTLAISAAILDIAALGFLSLG
AQAPSPEWGAMVAQGMDNLLTAPWAVTIPGLAILFSVLSINLVGDGLRSALAPIRN
>Mature_295_residues
PPVKIYQEDQIASPTMRVWLNFSANPFALAGLWTIAFLLLLTLFGPMIAPFPPEAQDPRALLLPPSWDPSGTVAHFLGTD
DLGRDIFSRLLHGAHLTFGMALLIVVTALFTGFIIGSLSGMMRGLKSSILGHLLDALLSIPSLLMAILVVAVMGPGLENV
FWAVGIALTPQFVRSIHQSVHEELQKEYVTAARLDGANSMQIFWYVIMPNVWEVVIIQTTLAISAAILDIAALGFLSLGA
QAPSPEWGAMVAQGMDNLLTAPWAVTIPGLAILFSVLSINLVGDGLRSALAPIRN

Specific function: Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides [H]

COG id: COG4171

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787549, Length=291, Percent_Identity=49.1408934707904, Blast_Score=281, Evalue=4e-77,
Organism=Escherichia coli, GI1789964, Length=280, Percent_Identity=43.5714285714286, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1787760, Length=275, Percent_Identity=38.9090909090909, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1787054, Length=294, Percent_Identity=35.3741496598639, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=33.7448559670782, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787498, Length=272, Percent_Identity=29.4117647058824, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=26.1061946902655, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31814; Mature: 31683

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPVKIYQEDQIASPTMRVWLNFSANPFALAGLWTIAFLLLLTLFGPMIAPFPPEAQDPR
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ALLLPPSWDPSGTVAHFLGTDDLGRDIFSRLLHGAHLTFGMALLIVVTALFTGFIIGSLS
EEEECCCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMMRGLKSSILGHLLDALLSIPSLLMAILVVAVMGPGLENVFWAVGIALTPQFVRSIHQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHH
VHEELQKEYVTAARLDGANSMQIFWYVIMPNVWEVVIIQTTLAISAAILDIAALGFLSLG
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AQAPSPEWGAMVAQGMDNLLTAPWAVTIPGLAILFSVLSINLVGDGLRSALAPIRN
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PPVKIYQEDQIASPTMRVWLNFSANPFALAGLWTIAFLLLLTLFGPMIAPFPPEAQDPR
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ALLLPPSWDPSGTVAHFLGTDDLGRDIFSRLLHGAHLTFGMALLIVVTALFTGFIIGSLS
EEEECCCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMMRGLKSSILGHLLDALLSIPSLLMAILVVAVMGPGLENVFWAVGIALTPQFVRSIHQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHH
VHEELQKEYVTAARLDGANSMQIFWYVIMPNVWEVVIIQTTLAISAAILDIAALGFLSLG
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AQAPSPEWGAMVAQGMDNLLTAPWAVTIPGLAILFSVLSINLVGDGLRSALAPIRN
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; peptides [Periplasm]; H2O [C]

Specific reaction: ATP + peptides [Periplasm] + H2O = ADP + phosphate + peptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]