| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is folD
Identifier: 126173836
GI number: 126173836
Start: 1870897
End: 1871751
Strand: Reverse
Name: folD
Synonym: Sbal_1602
Alternate gene names: 126173836
Gene position: 1871751-1870897 (Counterclockwise)
Preceding gene: 126173843
Following gene: 126173834
Centisome position: 36.51
GC content: 49.36
Gene sequence:
>855_bases ATGACAGCCCAAATAATCGACGGCAAGGCGATTGCTCAATCCATCCGCACTAAGCTCAGCGAAAAAGTCACCGCCCGCAA AGAGGCTGGACAGCGCATTCCGGGTTTAGCCGTAGTATTAGTGGGAGCCGATCCGGCATCACAGGTTTATGTTGGAAGCA AACGTAAGGCCTGTGAAGAAGTTGGATTTATTTCTCGTTCATACGATTTAGAAACAAGTTGCAGTGAAGATGAGTTGCTG AGCCTTATTGATAGTCTGAATGATGATCCGACCATCGATGGCATTTTAGTGCAACTGCCACTACCCGCCCATATCGAAGA TTCAAAAGTCATCGAACGTATTCGCCCAGATAAAGATGTCGATGGATTTCACCCGTACAACGTTGGCCGTTTAGCCCAGC GTATTCCGGTGCTGCGCTCTTGCACGCCAATGGGCATAATGACACTCATCAAATCCACCGGCGTTGATACCTATGGTTTA GATGCTGTCGTGGTTGGTGCGTCTAATATTGTCGGCCGCCCTATGACGTTAGAATTACTGTTGGCGGGTTGCACTACGAC CACTTGCCACCGTTTCACTAAGAATCTTGAGCAAAAAATTCGTATCGCAGATCTCGTGGTTGTCGCAGTCGGTAAACCCG GCTTCATTCCTGGTGAGTGGATCAAGCCCGGCGCTATCGTCATTGACGTAGGCATTAACCGTTTAGATAACGGCACCTTA GTCGGCGATGTGCAATATGACGTTGCGGCGCAAAATGCCAGCTTTATCACTCCAGTCCCCGGCGGTGTTGGCCCGATGAC GATTGCGAGTCTATTGGAAAACACCTTATACGCTGCCGAGCAATATCACGACTAA
Upstream 100 bases:
>100_bases CATGACACAGTAGCTGTGCCCTGTTAAAATAGCCGCGATTGCCAATCTCTGTGTTAACTACTGTTTTAACCATCGCCCAT ATAAAGGATATCCTACACCC
Downstream 100 bases:
>100_bases GTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTGCAAGCATAAAA AAACCTGCATGATGCAGGTT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELL SLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGL DAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD
Sequences:
>Translated_284_residues MTAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELL SLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGL DAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD >Mature_283_residues TAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLS LIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGLD AVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTLV GDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=298, Percent_Identity=46.3087248322148, Blast_Score=234, Evalue=6e-62, Organism=Homo sapiens, GI222418558, Length=294, Percent_Identity=42.1768707482993, Blast_Score=214, Evalue=7e-56, Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=43.1972789115646, Blast_Score=213, Evalue=1e-55, Organism=Homo sapiens, GI36796743, Length=220, Percent_Identity=27.7272727272727, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=71.4788732394366, Blast_Score=425, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17568735, Length=294, Percent_Identity=39.4557823129252, Blast_Score=184, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=40.9395973154362, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=42.1602787456446, Blast_Score=220, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322933, Length=311, Percent_Identity=26.6881028938907, Blast_Score=82, Evalue=8e-17, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=47.8114478114478, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=47.8114478114478, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI62472483, Length=290, Percent_Identity=44.8275862068966, Blast_Score=227, Evalue=6e-60, Organism=Drosophila melanogaster, GI45551871, Length=290, Percent_Identity=44.8275862068966, Blast_Score=227, Evalue=6e-60, Organism=Drosophila melanogaster, GI24645718, Length=290, Percent_Identity=44.8275862068966, Blast_Score=227, Evalue=8e-60, Organism=Drosophila melanogaster, GI17137370, Length=290, Percent_Identity=44.8275862068966, Blast_Score=227, Evalue=8e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_SHEB2 (B8E5F1)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002358663.1 - ProteinModelPortal: B8E5F1 - SMR: B8E5F1 - GeneID: 7087131 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_2752 - HOGENOM: HBG328751 - OMA: DVVYETA - ProtClustDB: PRK10792 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30435; Mature: 30304
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEE CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHH VGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDV HHCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELL CCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEHH LAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL HHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEE VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD EEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEE CCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHH VGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDV HHCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELL CCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEHH LAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL HHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEE VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD EEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA