| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173825
Identifier: 126173825
GI number: 126173825
Start: 1856094
End: 1858013
Strand: Reverse
Name: 126173825
Synonym: Sbal_1591
Alternate gene names: NA
Gene position: 1858013-1856094 (Counterclockwise)
Preceding gene: 126173826
Following gene: 126173824
Centisome position: 36.24
GC content: 49.11
Gene sequence:
>1920_bases ATGAACAAGTTTGCAAAAATGAGCACTCAATTCAGTCTGATGCTGGCCTTAGTCTCGCTATTAAGCGCCTGTGGCGGTGA TAAGGGCCAAGATGTTAATCCCGGTGAACCCGCAAAACCACCCGCATTAATCATCACTAGCCTAAAGGTCATGGTCGATA AAGTCGCGATAACAGATGGCATTGCTCAAGTGGATTTTCAAGTGAGCAATCAAGATGATGAAGCCGTAATTGGTGTCCCA TCGGCGACGTTTATTGCGGCGCAGCTTCTCCCCCAAGGCTATACAGGTGCGGGAAATAGCAGTGAATGGCAACATTTTAC CGCTGAAACCTGCGCGGCAACTTGCCCAGGCAGTCTCACAGATCATAAAAACGGTCACTACAGTTACACCTTCAGCGCCA CGTTTAATGGCATGAATGGGGTGACGTTTATGCCAGAAGCGACCCAAAGAATGGTGGTCAAAATCGGCGGCGATAAACTT GCCGATAACACGCCCTTGCCTATTACCAATCAACATTATGACTGGCAAACTTCTGGGGATAATGTCGCTTACACCCGCAA CTTAGTCACAATAGAAACTTGTAATAGTTGCCACAGCAATCTTGCTTTCCATGGCAGTAAATATAATCAAATCGAAACCT GCGTCACCTGTCATAACAGCAAAAAAGTCAGTAACCCTGCGGATATTTTCCCGCAAATGATCCACAGCAAGCATTTAACC GGTTTCCCGCAACCCATCAGTGACTGCCAAACCTGTCATGTCGATAAGGCAGAGTTAGCTGAGCAGCAAAACTGGCACAG AGTCCCAACCATGCAAGCCTGCGGCGCCTGTCATACACAAATTAATTTTCCCGCAGGCGAAGGACACCCAGTGCAGGCTG ATAACAGTAACTGCGTGGCGTGCCATAATGCAGACTGGACCGTAAGCGTTCACAGTGATGAAGACAAAACTGCGGCACTG ATGCAATTTAGCCCAAGCATCACCAGCGCCAGTATGGATGCCAATGGTACAGTCACCGTCGCGGTTGAATTGATGAACCC AGCTACTGGCTCCGTCTACAGCGACAGTGCCGATAAGCTAAAATTCATTAATGATTTAAGGGTATATGCCAACTGGGGAA CCAGTTTTGATTATGCCACTCGCTCTGCCCGCTCGATTAAGCTGCCGGAATCCACCCCAGTGTCAGGCTCAAATGGCATT TATACCTATACGATTTCGGGTCTTACTGTGCCTGCGGGCACTGAAGCGGGTCACGGCGGACTCGCGATTCAAGGCCGAGT CTGCGCCAAAGACAAAGTACTCGTTGATTGCACGACTGACCTGGCGGAAGTGTTAGTGATTAAAGCCAGCCACAGTTATT TTGATATGGCAGCATTAAGCAGTACGGGTCGCCGCACTGTTGTCAGTAATGCAAGCTGCGGTAATTGCCATGGCGATCAA AAGCTTAATATTCACGGCTCACGCAACGATCTCGGTGGTCAATGTCAGCTATGTCATAACGCCAATATGCTGGCTGATGC GACGGCGGCAAATCCTTCCACCACGTCGTTTGACTTTAAGCAGCTGATCCACGGTATTCACACCAGCCAATTCGCAGGTT TTGAAAACCTAAACTACCCAGGGAAAATCGGTAACTGTGCCCAATGCCATGTTAACGATTCTGCGGGGATATCTACCGTC GCCCTTCCCTTAAATTCAGCGGTACAACCCCTTGCCCTCGATAACGGCACTTTTACCAGCCCAATTGCCGCTGTGTGTAG CAACTGCCATTCAGATACCAGCACTCATAACCACATGGCTCAGCAAGGTGCTGTTTTTGCTGGTACAAAAGCCGATGCAA CCGCAGGAACTGAAACCTGTGCTTTCTGTCATGGACAAGGCGGAGTCGCGGACGTGTTAAAAGTGCATCCCATAAACTAA
Upstream 100 bases:
>100_bases TTGGTGATATGGGCCACGACTACAATGCTCACTACTTAGGTTTGACCTTAAGCTACCAAATGTAACTTAGGCACTGACAG CGCATTCCAAGGATAGAAAT
Downstream 100 bases:
>100_bases GCCTATGATGCTGGCCTAAAAAGGCCAGCAACTGCAGATATAAAAGGAACTCATACTATGCAGTCATCTACTCCTAAAGA AATAGTCAGATCTCAGTCAC
Product: decaheme cytochrome c MtrF
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; DeCa-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 639; Mature: 639
Protein sequence:
>639_residues MNKFAKMSTQFSLMLALVSLLSACGGDKGQDVNPGEPAKPPALIITSLKVMVDKVAITDGIAQVDFQVSNQDDEAVIGVP SATFIAAQLLPQGYTGAGNSSEWQHFTAETCAATCPGSLTDHKNGHYSYTFSATFNGMNGVTFMPEATQRMVVKIGGDKL ADNTPLPITNQHYDWQTSGDNVAYTRNLVTIETCNSCHSNLAFHGSKYNQIETCVTCHNSKKVSNPADIFPQMIHSKHLT GFPQPISDCQTCHVDKAELAEQQNWHRVPTMQACGACHTQINFPAGEGHPVQADNSNCVACHNADWTVSVHSDEDKTAAL MQFSPSITSASMDANGTVTVAVELMNPATGSVYSDSADKLKFINDLRVYANWGTSFDYATRSARSIKLPESTPVSGSNGI YTYTISGLTVPAGTEAGHGGLAIQGRVCAKDKVLVDCTTDLAEVLVIKASHSYFDMAALSSTGRRTVVSNASCGNCHGDQ KLNIHGSRNDLGGQCQLCHNANMLADATAANPSTTSFDFKQLIHGIHTSQFAGFENLNYPGKIGNCAQCHVNDSAGISTV ALPLNSAVQPLALDNGTFTSPIAAVCSNCHSDTSTHNHMAQQGAVFAGTKADATAGTETCAFCHGQGGVADVLKVHPIN
Sequences:
>Translated_639_residues MNKFAKMSTQFSLMLALVSLLSACGGDKGQDVNPGEPAKPPALIITSLKVMVDKVAITDGIAQVDFQVSNQDDEAVIGVP SATFIAAQLLPQGYTGAGNSSEWQHFTAETCAATCPGSLTDHKNGHYSYTFSATFNGMNGVTFMPEATQRMVVKIGGDKL ADNTPLPITNQHYDWQTSGDNVAYTRNLVTIETCNSCHSNLAFHGSKYNQIETCVTCHNSKKVSNPADIFPQMIHSKHLT GFPQPISDCQTCHVDKAELAEQQNWHRVPTMQACGACHTQINFPAGEGHPVQADNSNCVACHNADWTVSVHSDEDKTAAL MQFSPSITSASMDANGTVTVAVELMNPATGSVYSDSADKLKFINDLRVYANWGTSFDYATRSARSIKLPESTPVSGSNGI YTYTISGLTVPAGTEAGHGGLAIQGRVCAKDKVLVDCTTDLAEVLVIKASHSYFDMAALSSTGRRTVVSNASCGNCHGDQ KLNIHGSRNDLGGQCQLCHNANMLADATAANPSTTSFDFKQLIHGIHTSQFAGFENLNYPGKIGNCAQCHVNDSAGISTV ALPLNSAVQPLALDNGTFTSPIAAVCSNCHSDTSTHNHMAQQGAVFAGTKADATAGTETCAFCHGQGGVADVLKVHPIN >Mature_639_residues MNKFAKMSTQFSLMLALVSLLSACGGDKGQDVNPGEPAKPPALIITSLKVMVDKVAITDGIAQVDFQVSNQDDEAVIGVP SATFIAAQLLPQGYTGAGNSSEWQHFTAETCAATCPGSLTDHKNGHYSYTFSATFNGMNGVTFMPEATQRMVVKIGGDKL ADNTPLPITNQHYDWQTSGDNVAYTRNLVTIETCNSCHSNLAFHGSKYNQIETCVTCHNSKKVSNPADIFPQMIHSKHLT GFPQPISDCQTCHVDKAELAEQQNWHRVPTMQACGACHTQINFPAGEGHPVQADNSNCVACHNADWTVSVHSDEDKTAAL MQFSPSITSASMDANGTVTVAVELMNPATGSVYSDSADKLKFINDLRVYANWGTSFDYATRSARSIKLPESTPVSGSNGI YTYTISGLTVPAGTEAGHGGLAIQGRVCAKDKVLVDCTTDLAEVLVIKASHSYFDMAALSSTGRRTVVSNASCGNCHGDQ KLNIHGSRNDLGGQCQLCHNANMLADATAANPSTTSFDFKQLIHGIHTSQFAGFENLNYPGKIGNCAQCHVNDSAGISTV ALPLNSAVQPLALDNGTFTSPIAAVCSNCHSDTSTHNHMAQQGAVFAGTKADATAGTETCAFCHGQGGVADVLKVHPIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67652; Mature: 67652
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFAKMSTQFSLMLALVSLLSACGGDKGQDVNPGEPAKPPALIITSLKVMVDKVAITDG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC IAQVDFQVSNQDDEAVIGVPSATFIAAQLLPQGYTGAGNSSEWQHFTAETCAATCPGSLT CEEEEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCC DHKNGHYSYTFSATFNGMNGVTFMPEATQRMVVKIGGDKLADNTPLPITNQHYDWQTSGD CCCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCC NVAYTRNLVTIETCNSCHSNLAFHGSKYNQIETCVTCHNSKKVSNPADIFPQMIHSKHLT CEEEEEEEEEEEECCCHHCCCEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCC GFPQPISDCQTCHVDKAELAEQQNWHRVPTMQACGACHTQINFPAGEGHPVQADNSNCVA CCCCCHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCCCCCEEECCCCCCCCEECCCCCEEE CHNADWTVSVHSDEDKTAALMQFSPSITSASMDANGTVTVAVELMNPATGSVYSDSADKL EECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEECCCCHHH KFINDLRVYANWGTSFDYATRSARSIKLPESTPVSGSNGIYTYTISGLTVPAGTEAGHGG HHEEEEEEEEECCCCCHHHCCCCCEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCC LAIQGRVCAKDKVLVDCTTDLAEVLVIKASHSYFDMAALSSTGRRTVVSNASCGNCHGDQ EEEECEEECCCCEEEEECCCCEEEEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCCCCC KLNIHGSRNDLGGQCQLCHNANMLADATAANPSTTSFDFKQLIHGIHTSQFAGFENLNYP EEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GKIGNCAQCHVNDSAGISTVALPLNSAVQPLALDNGTFTSPIAAVCSNCHSDTSTHNHMA CCCCCEEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHH QQGAVFAGTKADATAGTETCAFCHGQGGVADVLKVHPIN HCCCEEECCCCCCCCCCCEEEEECCCCCHHHEEEEECCC >Mature Secondary Structure MNKFAKMSTQFSLMLALVSLLSACGGDKGQDVNPGEPAKPPALIITSLKVMVDKVAITDG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC IAQVDFQVSNQDDEAVIGVPSATFIAAQLLPQGYTGAGNSSEWQHFTAETCAATCPGSLT CEEEEEEECCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCC DHKNGHYSYTFSATFNGMNGVTFMPEATQRMVVKIGGDKLADNTPLPITNQHYDWQTSGD CCCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCC NVAYTRNLVTIETCNSCHSNLAFHGSKYNQIETCVTCHNSKKVSNPADIFPQMIHSKHLT CEEEEEEEEEEEECCCHHCCCEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCC GFPQPISDCQTCHVDKAELAEQQNWHRVPTMQACGACHTQINFPAGEGHPVQADNSNCVA CCCCCHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCCCCCEEECCCCCCCCEECCCCCEEE CHNADWTVSVHSDEDKTAALMQFSPSITSASMDANGTVTVAVELMNPATGSVYSDSADKL EECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEECCCCHHH KFINDLRVYANWGTSFDYATRSARSIKLPESTPVSGSNGIYTYTISGLTVPAGTEAGHGG HHEEEEEEEEECCCCCHHHCCCCCEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCC LAIQGRVCAKDKVLVDCTTDLAEVLVIKASHSYFDMAALSSTGRRTVVSNASCGNCHGDQ EEEECEEECCCCEEEEECCCCEEEEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCCCCC KLNIHGSRNDLGGQCQLCHNANMLADATAANPSTTSFDFKQLIHGIHTSQFAGFENLNYP EEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GKIGNCAQCHVNDSAGISTVALPLNSAVQPLALDNGTFTSPIAAVCSNCHSDTSTHNHMA CCCCCEEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHH QQGAVFAGTKADATAGTETCAFCHGQGGVADVLKVHPIN HCCCEEECCCCCCCCCCCEEEEECCCCCHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA