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The map label for this gene is dsdX [C]

Identifier: 126173810

GI number: 126173810

Start: 1835172

End: 1836530

Strand: Reverse

Name: dsdX [C]

Synonym: Sbal_1576

Alternate gene names: 126173810

Gene position: 1836530-1835172 (Counterclockwise)

Preceding gene: 126173811

Following gene: 126173809

Centisome position: 35.82

GC content: 49.45

Gene sequence:

>1359_bases
ATGAACTTAGTGCTTATTCTTATCGGCGTGATTGCATTTATTGTTATCGCGACCTCAAAATTTAAACTCCACCCCTTTTT
AACCTTAATTCTAGCCGCCTTTATCGCGGCGTTCGCCTATGGCTTACCGAGCGGAGAAATCGCTAAAACCATCACCACAG
GTTTTGGCGGTATCTTAGGTTATATCGGCCTTGTGATCGTCTTGGGGACTATCATAGGTATCATTCTAGAAAAAAGCGGC
GCCGCCATTACCATGGCGGATGTGGTGATCAAGGTATTAGGTAAACGCTTCCCGACATTAACTATGTCGGTCATCGGCTA
CCTAGTGTCTATTCCAGTCTTTTGTGATTCGGGCTTTGTGATCTTGAACTCGCTAAAACAATCGATGGCGAACCGCATGA
AGGTCTCTAGCGTCTCCATGAGCGTTGCCTTAGCCACGGGTCTGTATGCCACTCACACCTTTGTACCACCAACGCCGGGT
CCTATCGCCGCTGCGGGTAACTTAGGCTTAGAGTCGAACTTAGGCTTAGTGATTGGCGTGGGTCTTTTTGTGGCCGCCGT
TGCCGCATTAGCGGGCATGTTATGGGCGAACCGTTTTGCCGATGTTGAACCAGATGGTGAAGGTGCGCAGGAGCTTAAAG
CGGAAGCGAGCGACTATGAAACCCTGAAAAAAAGCTATGGCACCCTGCCCAGCCCATTAAAAGCCTTCGCACCGATTTTT
GTACCTATCGTATTAATTTGTTTAGGTTCTATCGCTAACTTCCCTTCAGCGCCTTTAGGTAAAGCAGGGTTATTTGACGC
GCTAGTGTTCCTCGGTCAGCCCGTTAACGCTCTGATGATTGGCCTATTCTTATCCCTGTCGTTATTAAAGGGTGAGAATA
AGATCAGTGAATTTAGCGAGCGCATAAGCCAAGGGTTAGTCACAGCTGCGCCGATTATTTTAATCACAGGTGCGGGCGGC
GCTTTTGGTGCGGTCTTGAAAGCCACGCCTATCGGTGACTTTTTAGGCACATCACTGTCGGCACTCGGTATCGGTATCTT
TATGCCCTTTATCGTCGCCGCGGCGCTTAAATCGGCGCAGGGTTCATCGACTGTGGCATTAGTCGCAACCTCGGCACTGG
TTGCGCCTATGCTCGGTGATATTGGCCTTGGTAGCGATATGGGCCGCGTATTAACGGTAATGGCAATTGGTGCCGGTGCA
ATGACGGTTTCCCACGCCAATGACAGCTTCTTCTGGGTCGTCACCCAATTTAGCCGCATGAGTGTGAAACAAGCTTACAA
AGCACAAACCATGGCAACCCTTATTCAAGGTGTCACCGCTATGTTGACTGTGTATGTGCTCAGCTTAGTCTTGCTCTGA

Upstream 100 bases:

>100_bases
AGCCCTCATTTGGACCCAGGCCCAAATAAGCACTGCGCCCTACAATATAAGTCAAAAAACTTACTCAAAAACTTCAGCCA
AGAACTGAACGGGACATAAT

Downstream 100 bases:

>100_bases
TATTAATTAGTAATTAGTGATTTAACCTTGATTCAAGCTTGTCCCTTGGGCGCTAACCGCGCCCAAGATATCTTTTTTAT
CGCCCAAATAATTGCAACAG

Product: gluconate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MNLVLILIGVIAFIVIATSKFKLHPFLTLILAAFIAAFAYGLPSGEIAKTITTGFGGILGYIGLVIVLGTIIGIILEKSG
AAITMADVVIKVLGKRFPTLTMSVIGYLVSIPVFCDSGFVILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPG
PIAAAGNLGLESNLGLVIGVGLFVAAVAALAGMLWANRFADVEPDGEGAQELKAEASDYETLKKSYGTLPSPLKAFAPIF
VPIVLICLGSIANFPSAPLGKAGLFDALVFLGQPVNALMIGLFLSLSLLKGENKISEFSERISQGLVTAAPIILITGAGG
AFGAVLKATPIGDFLGTSLSALGIGIFMPFIVAAALKSAQGSSTVALVATSALVAPMLGDIGLGSDMGRVLTVMAIGAGA
MTVSHANDSFFWVVTQFSRMSVKQAYKAQTMATLIQGVTAMLTVYVLSLVLL

Sequences:

>Translated_452_residues
MNLVLILIGVIAFIVIATSKFKLHPFLTLILAAFIAAFAYGLPSGEIAKTITTGFGGILGYIGLVIVLGTIIGIILEKSG
AAITMADVVIKVLGKRFPTLTMSVIGYLVSIPVFCDSGFVILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPG
PIAAAGNLGLESNLGLVIGVGLFVAAVAALAGMLWANRFADVEPDGEGAQELKAEASDYETLKKSYGTLPSPLKAFAPIF
VPIVLICLGSIANFPSAPLGKAGLFDALVFLGQPVNALMIGLFLSLSLLKGENKISEFSERISQGLVTAAPIILITGAGG
AFGAVLKATPIGDFLGTSLSALGIGIFMPFIVAAALKSAQGSSTVALVATSALVAPMLGDIGLGSDMGRVLTVMAIGAGA
MTVSHANDSFFWVVTQFSRMSVKQAYKAQTMATLIQGVTAMLTVYVLSLVLL
>Mature_452_residues
MNLVLILIGVIAFIVIATSKFKLHPFLTLILAAFIAAFAYGLPSGEIAKTITTGFGGILGYIGLVIVLGTIIGIILEKSG
AAITMADVVIKVLGKRFPTLTMSVIGYLVSIPVFCDSGFVILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPG
PIAAAGNLGLESNLGLVIGVGLFVAAVAALAGMLWANRFADVEPDGEGAQELKAEASDYETLKKSYGTLPSPLKAFAPIF
VPIVLICLGSIANFPSAPLGKAGLFDALVFLGQPVNALMIGLFLSLSLLKGENKISEFSERISQGLVTAAPIILITGAGG
AFGAVLKATPIGDFLGTSLSALGIGIFMPFIVAAALKSAQGSSTVALVATSALVAPMLGDIGLGSDMGRVLTVMAIGAGA
MTVSHANDSFFWVVTQFSRMSVKQAYKAQTMATLIQGVTAMLTVYVLSLVLL

Specific function: Probable Permease For An Unknown Substrate. [C]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=450, Percent_Identity=33.3333333333333, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1789097, Length=459, Percent_Identity=31.3725490196078, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI48994935, Length=457, Percent_Identity=28.6652078774617, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI1790716, Length=448, Percent_Identity=28.3482142857143, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI48994939, Length=454, Percent_Identity=28.6343612334802, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI2367370, Length=441, Percent_Identity=28.1179138321995, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1790776, Length=457, Percent_Identity=24.2888402625821, Blast_Score=121, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46540; Mature: 46540

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]