Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126173769
Identifier: 126173769
GI number: 126173769
Start: 1783247
End: 1784068
Strand: Reverse
Name: 126173769
Synonym: Sbal_1533
Alternate gene names: NA
Gene position: 1784068-1783247 (Counterclockwise)
Preceding gene: 126173771
Following gene: 126173767
Centisome position: 34.79
GC content: 47.57
Gene sequence:
>822_bases ATGTTAGGAACGCTAAAGAAGATGCGCGTACAGTTAGATGACGCGCAACAAGTGCAATATCAACTCGTTGTCGGTGATGA GTTACTCACGCTCAATCCATTGATAGGCAAGCAATTAACCTTGACCCACACGGGCAATATCTTCTGCTGCAACTGCGGTA AAAAGAGCAAGAAGAGTTACTCGCAGGGCCACTGTTTTGTCTGTATGCAAAAGCTGGCGAGTTGCGATATGTGCATCATG AAGCCGGAAACTTGCCATTACGACCAAGGCACTTGCCGCGAACCAGAGTGGGCCCAGAGCCACTGTTTTGTGCCGCATTA TGTGTATTTGGCAAATACTTCGGGCGTTAAAGTCGGCATTACCCGCCACACGCAACTGCCCACCCGTTGGATTGACCAAG GTGCCACCCAAGGTTTGCCGATTTTTAAAGTCTCAACAAGGCAACTCTCAGGTCTGGTCGAAGTAGAATTGGCGAAACTG GTCAACGATAAAACCCATTGGCAAGCCATGTTAAAGGGCCACGCCGACGATATCGATTTGAATGTGAAAGCCGCAGAACT GATCCCGCAAATTGAGGCTAAGCTGCACGAAATCGGTATGCAGAAAGGCGATTACAGTATCGAGCGTTTAGATGAAACGA TTCAGCCGATTCATTATCCCATCGACACCTTTCCTAAGAAGATCACTTCCCACAACTTCGATAAAAATGGGGTGGTGAGC GGGATTTTGCAGGGGATTAAAGGTCAGTATTTAATGTTCGATACCGGCGTGATTAACATTCGTAAGTTTTCATCCTACGA GATCAGCGTCGAACACGACTGA
Upstream 100 bases:
>100_bases TGTATACTGACGGCCACGCAATGACGATATAACGAAAGTGTGCACTAGACCGCATGATGAGCGACTAAGCTGCACCAGAA CGCAACACATTAGGATTACC
Downstream 100 bases:
>100_bases TTGCCTGAAATTGAAACGGGCCTTACCCGTTAAAATGAAAAAGCGCGGCAGTTTTCACTGTCGCGCCCTTTATTGAGATG GCTGTCACTAAAATACCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLGTLKKMRVQLDDAQQVQYQLVVGDELLTLNPLIGKQLTLTHTGNIFCCNCGKKSKKSYSQGHCFVCMQKLASCDMCIM KPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKL VNDKTHWQAMLKGHADDIDLNVKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD
Sequences:
>Translated_273_residues MLGTLKKMRVQLDDAQQVQYQLVVGDELLTLNPLIGKQLTLTHTGNIFCCNCGKKSKKSYSQGHCFVCMQKLASCDMCIM KPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKL VNDKTHWQAMLKGHADDIDLNVKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD >Mature_273_residues MLGTLKKMRVQLDDAQQVQYQLVVGDELLTLNPLIGKQLTLTHTGNIFCCNCGKKSKKSYSQGHCFVCMQKLASCDMCIM KPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKL VNDKTHWQAMLKGHADDIDLNVKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30782; Mature: 30782
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGTLKKMRVQLDDAQQVQYQLVVGDELLTLNPLIGKQLTLTHTGNIFCCNCGKKSKKSY CCCCCHHHHEECCCCCCEEEEEEECCCEEEECCCCCCEEEEEECCCEEEECCCCHHCCCC SQGHCFVCMQKLASCDMCIMKPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKLVNDKTHWQAMLKGHADDIDL EECCCCCHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEE NVKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS EEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD HHHHHCCCCEEEEECCEEEEEEECCEEEEEECC >Mature Secondary Structure MLGTLKKMRVQLDDAQQVQYQLVVGDELLTLNPLIGKQLTLTHTGNIFCCNCGKKSKKSY CCCCCHHHHEECCCCCCEEEEEEECCCEEEECCCCCCEEEEEECCCEEEECCCCHHCCCC SQGHCFVCMQKLASCDMCIMKPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKLVNDKTHWQAMLKGHADDIDL EECCCCCHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEE NVKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS EEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD HHHHHCCCCEEEEECCEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA