| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173748
Identifier: 126173748
GI number: 126173748
Start: 1755658
End: 1757502
Strand: Reverse
Name: 126173748
Synonym: Sbal_1510
Alternate gene names: NA
Gene position: 1757502-1755658 (Counterclockwise)
Preceding gene: 126173750
Following gene: 126173747
Centisome position: 34.28
GC content: 46.83
Gene sequence:
>1845_bases GTGTCGCAGTTATTATCTGAATTCTGGAGCAATCAAGCGGATATCACCCTCAATATCGAAGTATTTAAATCGCTGACGGC CTATCGTTCGAATATTAAAGTGACAGTCGCGAATGAACTCGAACGGGATTGTTTGATTATACAATCGACCGAAGAAGAAT TAAGTGCAGAAGTGCGGATCAGTGAAAACTTAGTGATCACTCAAGCCAAAAACTTTGTTAATTTCATCAATGAAGTTCGC GCACACATTCCGGCCGACAATATTATTACCGCTGGCCATTATTATAGCGAACAGCAATTCTCGGTCAGCACGGGTAAGCA AATGATAGCCTACCAACAGGCTTGCCAGCTGTTCAACCGCAGGTTACAAAAAAAACCACTGGCGATCATCAAATGCACTT CCACTGAAGAAGTCAAAATCGCCTATAAAGCAGCCATCGATTATAACTTGCCGATCAGCGTGCGCTCGGGTGGGAATGAT CACGAAGGTGAAAGCACTGAAACCAATACCATAGTGTTGGATCTGCTGAAGATGGATAGCCTCACTTTAGATCCCATCAC AGGTATTGCGGCCATTGGCCCAGGCAATCGCTTTATCAATCTCACCACTGCCCTTGCAAAAAAAGGCGTGATGATCCCCC ATGGCACCAGTGGCAACGTTGCCTTAGCGGGATTTATTATGGGCGGCGGCTCAGGACCTTGGACCCGCAAATACGGCATG TGCTGCGAATCCCTATTACAGGCAGAAATTGTCCTTGGCATTGGTGAAACCCAAGTCGTCTCGGTTGCCAATAAACCTGA GTTACTCTGGGCGCTCAAGGGTGGCGGCGGATTAAGTTACGGCATAGTGACCCGCTTTTTTGTACAAACCTTTCCACTAC CGCCTTGCCTGCTCAAGTTTGAATTAGAGTGGAATTGCTATGATAAACAAACCCAAGAACTCATTGAGCACACCCCAACC AAAGACATTTTACAGCGCTGGGAAGCCATCATTAATGCCGACAGCACAGGCTGTTTGATTGGTACCAATCTCAAGATAAA TGCCAAACATTTACCCGCAGAACAACACAAAACGCCTGACATAGACACTGAGTCGATTAAGCATAACTGCTTGATGTATG GCTTTTGGGAAGGCAATTCCGCCAGTCTGAATCACTTTATCCAGACACAATTTAATGAGTTTGACCTAGTGCCCAATGAA ATTCGCATCGAGGGGATGGGCGGACTCACCAAAGCCTACGGTGAAAACTTAATGGCCAATTGGGAAAGGGAATCTTTTCA TCATCTGCAAGCTGACTTACAAGGCATAAACCGCTCACCGACGCCACCCGATTTAGATGAGCCCGCGCCCCATAAAGTCA CCTCGCGCTTAGTCAATCAAACGGGGCTCAGGGACGGTTATAAGCCACTGCTCGAAAGCTTAACCTCTCGCTATGTGCTT GAAGGTAATCGCCAATTGGGGCTATTTACCTATGTCACCCTTGGCGCCATTGCGGGTGATTATTATCGCACTATGGGCGA AGAGCAAAAGAGCCGCAGCGCCTTCCCCTACAAGGACAGACAATACACGATTCAATATCAAACTTGGTGGAATAACGCGC TGCAAGAGAAACAACAATTGCAGGATAGCCAAGTGTTTACTCGCATCAATCGTGCACTCGATTGGATTGATGCCAGCCGA AATTATGACATCCCCAACACCTCGGGCGCCTTTATCAGCTTCAAAGATAAGGCTATCCCCACTGATGTGTACTTCGACCA TAATTACGCCGCGTTAAAACGGATTAAGGCGGCCTACAGCCAAGATAGCTTTAACCATTTCCGCTCACGTAAAAGCATTA TTTAG
Upstream 100 bases:
>100_bases CTTCGGTCAACTGTTGATAATTCATGGTGATACTCTTTTACTTTGGCGAGATAAAGCGTACCACTTTTCAGCAGTTGGCT TCTTCTACACCTCGATTAGA
Downstream 100 bases:
>100_bases TTAATATATCGGCATAGCCTAGGGTGAGTTTTTAAGGCAAAATCGACGCCGTCCACAGGACGGTGTCGCCCCTTAACTCT CTGTTCACTCTGTTGTAGGT
Product: FAD linked oxidase domain-containing protein
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MSQLLSEFWSNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRISENLVITQAKNFVNFINEVR AHIPADNIITAGHYYSEQQFSVSTGKQMIAYQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNLPISVRSGGND HEGESTETNTIVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGGSGPWTRKYGM CCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLLKFELEWNCYDKQTQELIEHTPT KDILQRWEAIINADSTGCLIGTNLKINAKHLPAEQHKTPDIDTESIKHNCLMYGFWEGNSASLNHFIQTQFNEFDLVPNE IRIEGMGGLTKAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPLLESLTSRYVL EGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQLQDSQVFTRINRALDWIDASR NYDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYSQDSFNHFRSRKSII
Sequences:
>Translated_614_residues MSQLLSEFWSNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRISENLVITQAKNFVNFINEVR AHIPADNIITAGHYYSEQQFSVSTGKQMIAYQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNLPISVRSGGND HEGESTETNTIVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGGSGPWTRKYGM CCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLLKFELEWNCYDKQTQELIEHTPT KDILQRWEAIINADSTGCLIGTNLKINAKHLPAEQHKTPDIDTESIKHNCLMYGFWEGNSASLNHFIQTQFNEFDLVPNE IRIEGMGGLTKAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPLLESLTSRYVL EGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQLQDSQVFTRINRALDWIDASR NYDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYSQDSFNHFRSRKSII >Mature_613_residues SQLLSEFWSNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRISENLVITQAKNFVNFINEVRA HIPADNIITAGHYYSEQQFSVSTGKQMIAYQQACQLFNRRLQKKPLAIIKCTSTEEVKIAYKAAIDYNLPISVRSGGNDH EGESTETNTIVLDLLKMDSLTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGGSGPWTRKYGMC CESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLLKFELEWNCYDKQTQELIEHTPTK DILQRWEAIINADSTGCLIGTNLKINAKHLPAEQHKTPDIDTESIKHNCLMYGFWEGNSASLNHFIQTQFNEFDLVPNEI RIEGMGGLTKAYGENLMANWERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPLLESLTSRYVLE GNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQLQDSQVFTRINRALDWIDASRN YDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYSQDSFNHFRSRKSII
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 69099; Mature: 68968
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLLSEFWSNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRI CHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCHHHCCEEEEE SENLVITQAKNFVNFINEVRAHIPADNIITAGHYYSEQQFSVSTGKQMIAYQQACQLFNR ECCEEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHH RLQKKPLAIIKCTSTEEVKIAYKAAIDYNLPISVRSGGNDHEGESTETNTIVLDLLKMDS HHHCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC LTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGGSGPWTRKYGM CCCCCCCCEEEECCCCCEEEEEHHHHHCCEEECCCCCCCEEEEEEEEECCCCCCHHHHHH CCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLLKF HHHHHHHHHHEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE ELEWNCYDKQTQELIEHTPTKDILQRWEAIINADSTGCLIGTNLKINAKHLPAEQHKTPD EEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCCCHHCCCCC IDTESIKHNCLMYGFWEGNSASLNHFIQTQFNEFDLVPNEIRIEGMGGLTKAYGENLMAN CCHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCHHHCC WERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPLLESLTSRYVL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCEEE EGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQL CCCCCEEHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHH QDSQVFTRINRALDWIDASRNYDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHC QDSFNHFRSRKSII CCHHHHHHHHCCCC >Mature Secondary Structure SQLLSEFWSNQADITLNIEVFKSLTAYRSNIKVTVANELERDCLIIQSTEEELSAEVRI HHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCHHHCCEEEEE SENLVITQAKNFVNFINEVRAHIPADNIITAGHYYSEQQFSVSTGKQMIAYQQACQLFNR ECCEEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHH RLQKKPLAIIKCTSTEEVKIAYKAAIDYNLPISVRSGGNDHEGESTETNTIVLDLLKMDS HHHCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC LTLDPITGIAAIGPGNRFINLTTALAKKGVMIPHGTSGNVALAGFIMGGGSGPWTRKYGM CCCCCCCCEEEECCCCCEEEEEHHHHHCCEEECCCCCCCEEEEEEEEECCCCCCHHHHHH CCESLLQAEIVLGIGETQVVSVANKPELLWALKGGGGLSYGIVTRFFVQTFPLPPCLLKF HHHHHHHHHHEEECCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE ELEWNCYDKQTQELIEHTPTKDILQRWEAIINADSTGCLIGTNLKINAKHLPAEQHKTPD EEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCCCHHCCCCC IDTESIKHNCLMYGFWEGNSASLNHFIQTQFNEFDLVPNEIRIEGMGGLTKAYGENLMAN CCHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCHHHCC WERESFHHLQADLQGINRSPTPPDLDEPAPHKVTSRLVNQTGLRDGYKPLLESLTSRYVL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCEEE EGNRQLGLFTYVTLGAIAGDYYRTMGEEQKSRSAFPYKDRQYTIQYQTWWNNALQEKQQL CCCCCEEHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHH QDSQVFTRINRALDWIDASRNYDIPNTSGAFISFKDKAIPTDVYFDHNYAALKRIKAAYS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHC QDSFNHFRSRKSII CCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]