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The map label for this gene is napF [H]

Identifier: 126173719

GI number: 126173719

Start: 1722937

End: 1723419

Strand: Reverse

Name: napF [H]

Synonym: Sbal_1481

Alternate gene names: 126173719

Gene position: 1723419-1722937 (Counterclockwise)

Preceding gene: 126173720

Following gene: 126173718

Centisome position: 33.61

GC content: 48.45

Gene sequence:

>483_bases
ATGACTCAAAGTATTAATCACAGTCGTCGCAACCTCTTTCGCCGCCGTAAAGATAATGCCTTGAGGCCCCCTTGGGTGCG
TGATGATATCGAGTTCACCGATGTGTGCACGCGCTGTTCAGCCTGTGTTGAGGTGTGTGAAACCCAGATCATCATCAAAG
GCGATGGTGGATTTCCTGAAGTGTCCTTTAAAGACAATGAGTGCACATTTTGTATGCTTTGCGCTAAGGCTTGCCCTGAG
CATATCTTCGATTTAGCCCAAACACCTTGGTCGTATCAAGCCCATATTCAACAGAGCTGTTTAACCTTTCAAGGGATCTG
GTGCCAAAGTTGTAAGGATGCCTGTGAACCAAGAGCCATCAGTTTTGTGTTCAATATTGGCCAAGCTCCACGTCCGCAAA
TAGACCTTGAACTTTGTACCGGATGCGGCGCCTGTGTGGCTCCCTGCCCTAGCAAGGCCATTGAAATAACCCGACCGACT
TAA

Upstream 100 bases:

>100_bases
GCTAACAAATTGAATGGCTTGTGGAAATATCCCAAGCCATTTTTCTTTATCACTGTGAATACACCCATCACTTTGAATAA
TTAACCGTTCGAGGAGCAAT

Downstream 100 bases:

>100_bases
TGCAGCAAAGCCATCGCATTACCCATACAAAGCTGTGCTTATCATCCGTTTTACGCTAGTATCGCGCCTCTATTGAACTC
AGTTAATCCCTTCTCGAATT

Product: ferredoxin-type protein NapF

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTQSINHSRRNLFRRRKDNALRPPWVRDDIEFTDVCTRCSACVEVCETQIIIKGDGGFPEVSFKDNECTFCMLCAKACPE
HIFDLAQTPWSYQAHIQQSCLTFQGIWCQSCKDACEPRAISFVFNIGQAPRPQIDLELCTGCGACVAPCPSKAIEITRPT

Sequences:

>Translated_160_residues
MTQSINHSRRNLFRRRKDNALRPPWVRDDIEFTDVCTRCSACVEVCETQIIIKGDGGFPEVSFKDNECTFCMLCAKACPE
HIFDLAQTPWSYQAHIQQSCLTFQGIWCQSCKDACEPRAISFVFNIGQAPRPQIDLELCTGCGACVAPCPSKAIEITRPT
>Mature_159_residues
TQSINHSRRNLFRRRKDNALRPPWVRDDIEFTDVCTRCSACVEVCETQIIIKGDGGFPEVSFKDNECTFCMLCAKACPEH
IFDLAQTPWSYQAHIQQSCLTFQGIWCQSCKDACEPRAISFVFNIGQAPRPQIDLELCTGCGACVAPCPSKAIEITRPT

Specific function: Involved in electron transfer [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788536, Length=154, Percent_Identity=45.4545454545455, Blast_Score=147, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 17998; Mature: 17867

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
10.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSINHSRRNLFRRRKDNALRPPWVRDDIEFTDVCTRCSACVEVCETQIIIKGDGGFPE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCC
VSFKDNECTFCMLCAKACPEHIFDLAQTPWSYQAHIQQSCLTFQGIWCQSCKDACEPRAI
CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEE
SFVFNIGQAPRPQIDLELCTGCGACVAPCPSKAIEITRPT
EEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
TQSINHSRRNLFRRRKDNALRPPWVRDDIEFTDVCTRCSACVEVCETQIIIKGDGGFPE
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCC
VSFKDNECTFCMLCAKACPEHIFDLAQTPWSYQAHIQQSCLTFQGIWCQSCKDACEPRAI
CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEE
SFVFNIGQAPRPQIDLELCTGCGACVAPCPSKAIEITRPT
EEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]