| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is leuO [C]
Identifier: 126173717
GI number: 126173717
Start: 1721088
End: 1722062
Strand: Reverse
Name: leuO [C]
Synonym: Sbal_1479
Alternate gene names: 126173717
Gene position: 1722062-1721088 (Counterclockwise)
Preceding gene: 126173718
Following gene: 126173716
Centisome position: 33.59
GC content: 46.15
Gene sequence:
>975_bases ATGAGCAACTTATTACTCAAACAAATCTGTGAACTCGATGTTTTTACCTTGCTGGTATTTAAAAGTATTTTCGACACTGG GCACGCAAACAGTGCCGCCAAAGCGCTGGATGTTTCTGCACCAAAAATTAGCCGCTGCCTTAACGCATTACGCCTGACCT TTAACGATGAACTGTTTTATCGCCGTCAACAGGGGCTAAAACCCACTCCCCTAGCAGAAAGCCTGTATGTGGCTATTTGC CAATTTACCGAATCGGTTTATCACCTCGAACAATCTGCAACTCAAATACAAAATGCGGCCATCAATGCCGATTTACCGCT GCATATCGCTGCCTGTAATGGGCTATTGAGCTTTTTAGCGCCACAATTAAGCACGCCAGACGTCGCCCAAGCGCTAGGAC AAATACGTTTACATAAATGGCAAGAGAATAGCGCTGAGTTAATCCACGCAGGTGCGCTGGATTTTGGTATTACCTTAGAA AGTGCTGAAAATAAAGAATTAAGCTATACCAAACTGGGCTCAGTCAATGGCGTTTACATCGTTGCCGCCAAACAACATCC TCTGTGGCAGATTGAGACCGACATTACCTTAGAGCAAATCTGTCGCCATCCATTCCTCTACCAAGAAGTGAAGGGCTTTA ACAGCAAAATTGACCCCTTAGAATTATTTTGCCAGCGCCAAGGCCTCTTGCTACCAGCGGTGGATAAAGTCATCGACAGG GAGGAGTGGTATGCCCATTTACTCACCATGAAGAGTGTGGCTTTTTGTTCCAGCATTGATATGCACACAGTAAAACATAT GCCCGGATTACACTTAGAACGCCTAAGCGATACAGAGCTCAATCGACTCCACGATACTATGATGGCGCCACAATATTATC TTATTGAAAAACCAGCAATTCATCGGCGCTACAGCCAGAGTCAAAGCGCGCTTGTCGTGCGTTCCTTACTTGCCGCGCTC GACCCCGCACGCTAA
Upstream 100 bases:
>100_bases GCGGCGGTTTGGGTAATAGCAAGGAGCAGAGTCAGAGCCACAGAATGCCCTTAATAACCCCGCAAAAAATAGTTAAGACT CATACAGGGCAAAATACAAA
Downstream 100 bases:
>100_bases CGCGAGACAATAAGCTCAGCCAAGCTCGTGGATATAATGTTCACTAAACCTTGTTTACATCATTGCGATGAGTCGATGTT AAACGGGGTTTAGGTAGTAA
Product: LysR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator-Like Protein; Regulatory Protein LysR; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator LysR Family
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSNLLLKQICELDVFTLLVFKSIFDTGHANSAAKALDVSAPKISRCLNALRLTFNDELFYRRQQGLKPTPLAESLYVAIC QFTESVYHLEQSATQIQNAAINADLPLHIAACNGLLSFLAPQLSTPDVAQALGQIRLHKWQENSAELIHAGALDFGITLE SAENKELSYTKLGSVNGVYIVAAKQHPLWQIETDITLEQICRHPFLYQEVKGFNSKIDPLELFCQRQGLLLPAVDKVIDR EEWYAHLLTMKSVAFCSSIDMHTVKHMPGLHLERLSDTELNRLHDTMMAPQYYLIEKPAIHRRYSQSQSALVVRSLLAAL DPAR
Sequences:
>Translated_324_residues MSNLLLKQICELDVFTLLVFKSIFDTGHANSAAKALDVSAPKISRCLNALRLTFNDELFYRRQQGLKPTPLAESLYVAIC QFTESVYHLEQSATQIQNAAINADLPLHIAACNGLLSFLAPQLSTPDVAQALGQIRLHKWQENSAELIHAGALDFGITLE SAENKELSYTKLGSVNGVYIVAAKQHPLWQIETDITLEQICRHPFLYQEVKGFNSKIDPLELFCQRQGLLLPAVDKVIDR EEWYAHLLTMKSVAFCSSIDMHTVKHMPGLHLERLSDTELNRLHDTMMAPQYYLIEKPAIHRRYSQSQSALVVRSLLAAL DPAR >Mature_323_residues SNLLLKQICELDVFTLLVFKSIFDTGHANSAAKALDVSAPKISRCLNALRLTFNDELFYRRQQGLKPTPLAESLYVAICQ FTESVYHLEQSATQIQNAAINADLPLHIAACNGLLSFLAPQLSTPDVAQALGQIRLHKWQENSAELIHAGALDFGITLES AENKELSYTKLGSVNGVYIVAAKQHPLWQIETDITLEQICRHPFLYQEVKGFNSKIDPLELFCQRQGLLLPAVDKVIDRE EWYAHLLTMKSVAFCSSIDMHTVKHMPGLHLERLSDTELNRLHDTMMAPQYYLIEKPAIHRRYSQSQSALVVRSLLAALD PAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36436; Mature: 36305
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS50931 HTH_LYSR ; PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLLKQICELDVFTLLVFKSIFDTGHANSAAKALDVSAPKISRCLNALRLTFNDELFY CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHH RRQQGLKPTPLAESLYVAICQFTESVYHLEQSATQIQNAAINADLPLHIAACNGLLSFLA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHC PQLSTPDVAQALGQIRLHKWQENSAELIHAGALDFGITLESAENKELSYTKLGSVNGVYI CCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCEECEEEECCCCCCCCEEECCCCCCEEE VAAKQHPLWQIETDITLEQICRHPFLYQEVKGFNSKIDPLELFCQRQGLLLPAVDKVIDR EEECCCCCEEEECCCCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHH EEWYAHLLTMKSVAFCSSIDMHTVKHMPGLHLERLSDTELNRLHDTMMAPQYYLIEKPAI HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCEEEECCCHH HRRYSQSQSALVVRSLLAALDPAR HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SNLLLKQICELDVFTLLVFKSIFDTGHANSAAKALDVSAPKISRCLNALRLTFNDELFY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHH RRQQGLKPTPLAESLYVAICQFTESVYHLEQSATQIQNAAINADLPLHIAACNGLLSFLA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHC PQLSTPDVAQALGQIRLHKWQENSAELIHAGALDFGITLESAENKELSYTKLGSVNGVYI CCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCEECEEEECCCCCCCCEEECCCCCCEEE VAAKQHPLWQIETDITLEQICRHPFLYQEVKGFNSKIDPLELFCQRQGLLLPAVDKVIDR EEECCCCCEEEECCCCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHH EEWYAHLLTMKSVAFCSSIDMHTVKHMPGLHLERLSDTELNRLHDTMMAPQYYLIEKPAI HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCEEEECCCHH HRRYSQSQSALVVRSLLAALDPAR HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA