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The map label for this gene is cirA [C]

Identifier: 126173648

GI number: 126173648

Start: 1624413

End: 1627049

Strand: Reverse

Name: cirA [C]

Synonym: Sbal_1410

Alternate gene names: 126173648

Gene position: 1627049-1624413 (Counterclockwise)

Preceding gene: 126173653

Following gene: 126173647

Centisome position: 31.73

GC content: 49.6

Gene sequence:

>2637_bases
ATGTCAGAAGGTCAATTATTTAAGAGCTCTTTGCTCGCATTGTGTATCGCTAACGCCTTATTCGGGATGAGCTCAACCGC
AGTCGCGGCGGAGCAACAAGAGGCAACGGCAGAAAATATGGAGGTGATCCAAGTACGCGGCATACGTCGCTCAATTGAAG
CCTCATTGAATACCAAACGCTTCGCCGACTCCACGGTCGATGCCATCACCTCGGAAGACATAGGTAAGTTTCCCGATAAA
AACATCGGTGATGCGCTGCAGCGAATTTCTGGGGTCACGGTCGATAGGCAATACGGCGAAGTAAGCGGCGTTACTATTCG
CGGTACAGCGCCAGAGCAGAGCCGTATTTTGCTTAACGGTCAAACCGTTGCCAGCACTTCTTGGTATGACTTGGGTCCTG
CCACTCGTACCTTCAATATGGAATTATTGTCGGCCGAGCAAGTGAACGCCGTTGAAGTGCACAAAACCCCGACCGCCAGA
CTTGAAGAAGGTGCGCTGGGCGGTACTGTCGATCTCAAAACCCGCAAGCCCTTAGATCTCGATGCCCACACCTATCAAGT
CGCTGGCGAGCTGAGCCAAAGCAGCCTGTACGATGAAACAGACCCGAGTGGTTCTTTCCTAGGGAGTTGGAAAAATGACG
ACGAAAAGTTCGGCATTTTAGGCGCCTATTCAGTAGAAAAAATTACCAGCGGCCGCCAAGTGTTGGAATCTCTCAGTGGC
TATTATGAATACTTCGCCGCCGATCCCGCGCAAAATCAAGAATCTACCGTTGGCGCTTGGGGCATAGGCTCGCAGGCCTT
TAGAGCGGAACGTGAACGGACCAGCGCCCAAGTCACACTGCAATTTGCACCAACTGACAATACCGAGTTCACCTTAGATT
ACTTTAATTTTGAACTCGATATCCCCCACGTAAACCATAACTTCTTAACCGTTGGCGCGCGCGGTTCAGGCTCCACCAAC
GTAGTGAATAACGCCCAAGGCGGCACAGCGTCGGCAACGATTCTGCCTGCGTATGCGTCGATTATTTATAACCCTGTGGT
GCGCCACGCGGTCAATATGAAATCTGACGTACTCAACTTAACCGGAAAATACGTCGGAGACAGTTTTACGGTGAGTGGCG
TCATTGGCCAATCAACCTCAGATGGTGGCACCCAAGGCGGTTCATCTTCTTGGTGGATCCCAGCGACAGATCAAGGCGGT
AAAATTGGCGATCCCGCCTTCCCTAACGGTCAAGGCAGTGTCGATGGTGGCTTTAGTTACGACGCCACGGGTCCCTACCA
AGTGGTGCTGACGAGTTTAGATGCTAACGATGCCAGCCAATTCAAGCACGCCCAAGAGGCGAACTACGAAACCACAGTGC
AAGATCATAAAGTGACCTACGCACAGACCGATTTCGAATATCAACTCGACCATGATTTTATTAACAAAATTGCGGTCGGG
ATTAAATACAACACCAGTGATTTCGAGCGTAATGCCTTCAACCGTAACCCCGCAGAAATCCTAGGTTTCGTGCCCAATGG
CAACCTCGCTAACTGGAGCGATGGCGTGCTGTCTGGGCTACATTCCCAGAGCGGCGGCAATGTACTCGACTCCTATGCCA
AGTTAGATGAAGACAAATGGTGGGCCTTTATCAGCGAGAAATACGCCAATGGCGAGTTAGTGGAAGTCGCCGATCTCGGT
AACACCTTCACTGTCGAAGAGGATATGTTGGCCCTGTATGCCCAAGCGGATTTCAGCGGCGAATTCTACCGTGGTAACTT
TGGCGTGCGTTACGTTAACACAGACCAAACCTCAACCGGTTTTGCCGATGGCAAGCCCTACAATGAATCAGTCAATTACG
ATAATTGGCTACCGAGCATCAACGTCGCCTTCGATCTAAAAGAAGACTTAATCCTACGTGCTTCGGCCTCTTCCGTGATG
GCGCGTAACAACTACAGCGACCTCAAACCAGGTTTAGCCATAGCAAAAAACTTTGGTACTGCGACCGGCGGTAATCCAAA
TTTGAAACCCTATAAGGCGAATCAAGCCGACCTTGGCATCGAATGGTACTTCACTGAATCTTCTATGTTGTCGGCGGCCT
TGTTCTACAAAGATATTGATAACGTAGTGTTTGTCACTGAGTCGACGCAATATATCGAAGGTTGCGGCGCGTCAGAATCC
GAGTGGGATAAATGCCGTGTCATAGCCCCAGCCAACGGCGGCAGCGGCTCAGTGACTGGGCTTGAAATCCAGCTTCAACA
TAACTTTGAAAGCGGTTTTGGCTTCTTGACCAACTACACCTATGTTGACAGTAAGAGCACTCGCCCCGATGGCACTGAAC
AGATGATTGAAGGCGTATCTGAAAACTCCTTCAACGGTTCACTCTTCTACGAAGATGATCTGTTCAGCGCCCGTATCGCC
TATAACTGGCGTTCAGAATACTTAGGCGTGGGTAACATTCAAAACGTGTTAAACGACAGCTATCAACAAGTCGATGCCTC
GATTATTTGGCATGCGATGGAGAACTTAGATGTTTCACTCGAAGGGGTTAACTTAACCAATGAAGTGGTGCAATCCTATG
ATGTTAAATACGGATTGACGCAAAATACCATCGAATTTGGTTCGCGTTATTTCGTCGGTGCCAGCTACAAATTTTAA

Upstream 100 bases:

>100_bases
ATACCAATCCTAGTGTGAAAAGTACCGCATCAACAATTCGATAACAGGTAAGTTAACTGAAGAAAAAAACAACACTAAAG
CACTACAGGGACGCTATAAC

Downstream 100 bases:

>100_bases
ACTTGAGTCACACCATAGCCGACCTTAGGGTCGGCTTTTTGCGTTGATAATACAGCGGGGATAAGCCATGAAAGTGAAAC
AAGCAATCAGAAAAATCATT

Product: TonB-dependent receptor plug

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Maltose Outer Membrane Transporter MalA; NB-Dependent Receptor-Like Protein; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Plug Domain; NB Dependent Receptor-Related Protein; 3-Dehydroquinate Synthase; DEAD/DEAH Box Helicase-Like; Peptidase; Outer Membrane Receptor Family Protein; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein

Number of amino acids: Translated: 878; Mature: 877

Protein sequence:

>878_residues
MSEGQLFKSSLLALCIANALFGMSSTAVAAEQQEATAENMEVIQVRGIRRSIEASLNTKRFADSTVDAITSEDIGKFPDK
NIGDALQRISGVTVDRQYGEVSGVTIRGTAPEQSRILLNGQTVASTSWYDLGPATRTFNMELLSAEQVNAVEVHKTPTAR
LEEGALGGTVDLKTRKPLDLDAHTYQVAGELSQSSLYDETDPSGSFLGSWKNDDEKFGILGAYSVEKITSGRQVLESLSG
YYEYFAADPAQNQESTVGAWGIGSQAFRAERERTSAQVTLQFAPTDNTEFTLDYFNFELDIPHVNHNFLTVGARGSGSTN
VVNNAQGGTASATILPAYASIIYNPVVRHAVNMKSDVLNLTGKYVGDSFTVSGVIGQSTSDGGTQGGSSSWWIPATDQGG
KIGDPAFPNGQGSVDGGFSYDATGPYQVVLTSLDANDASQFKHAQEANYETTVQDHKVTYAQTDFEYQLDHDFINKIAVG
IKYNTSDFERNAFNRNPAEILGFVPNGNLANWSDGVLSGLHSQSGGNVLDSYAKLDEDKWWAFISEKYANGELVEVADLG
NTFTVEEDMLALYAQADFSGEFYRGNFGVRYVNTDQTSTGFADGKPYNESVNYDNWLPSINVAFDLKEDLILRASASSVM
ARNNYSDLKPGLAIAKNFGTATGGNPNLKPYKANQADLGIEWYFTESSMLSAALFYKDIDNVVFVTESTQYIEGCGASES
EWDKCRVIAPANGGSGSVTGLEIQLQHNFESGFGFLTNYTYVDSKSTRPDGTEQMIEGVSENSFNGSLFYEDDLFSARIA
YNWRSEYLGVGNIQNVLNDSYQQVDASIIWHAMENLDVSLEGVNLTNEVVQSYDVKYGLTQNTIEFGSRYFVGASYKF

Sequences:

>Translated_878_residues
MSEGQLFKSSLLALCIANALFGMSSTAVAAEQQEATAENMEVIQVRGIRRSIEASLNTKRFADSTVDAITSEDIGKFPDK
NIGDALQRISGVTVDRQYGEVSGVTIRGTAPEQSRILLNGQTVASTSWYDLGPATRTFNMELLSAEQVNAVEVHKTPTAR
LEEGALGGTVDLKTRKPLDLDAHTYQVAGELSQSSLYDETDPSGSFLGSWKNDDEKFGILGAYSVEKITSGRQVLESLSG
YYEYFAADPAQNQESTVGAWGIGSQAFRAERERTSAQVTLQFAPTDNTEFTLDYFNFELDIPHVNHNFLTVGARGSGSTN
VVNNAQGGTASATILPAYASIIYNPVVRHAVNMKSDVLNLTGKYVGDSFTVSGVIGQSTSDGGTQGGSSSWWIPATDQGG
KIGDPAFPNGQGSVDGGFSYDATGPYQVVLTSLDANDASQFKHAQEANYETTVQDHKVTYAQTDFEYQLDHDFINKIAVG
IKYNTSDFERNAFNRNPAEILGFVPNGNLANWSDGVLSGLHSQSGGNVLDSYAKLDEDKWWAFISEKYANGELVEVADLG
NTFTVEEDMLALYAQADFSGEFYRGNFGVRYVNTDQTSTGFADGKPYNESVNYDNWLPSINVAFDLKEDLILRASASSVM
ARNNYSDLKPGLAIAKNFGTATGGNPNLKPYKANQADLGIEWYFTESSMLSAALFYKDIDNVVFVTESTQYIEGCGASES
EWDKCRVIAPANGGSGSVTGLEIQLQHNFESGFGFLTNYTYVDSKSTRPDGTEQMIEGVSENSFNGSLFYEDDLFSARIA
YNWRSEYLGVGNIQNVLNDSYQQVDASIIWHAMENLDVSLEGVNLTNEVVQSYDVKYGLTQNTIEFGSRYFVGASYKF
>Mature_877_residues
SEGQLFKSSLLALCIANALFGMSSTAVAAEQQEATAENMEVIQVRGIRRSIEASLNTKRFADSTVDAITSEDIGKFPDKN
IGDALQRISGVTVDRQYGEVSGVTIRGTAPEQSRILLNGQTVASTSWYDLGPATRTFNMELLSAEQVNAVEVHKTPTARL
EEGALGGTVDLKTRKPLDLDAHTYQVAGELSQSSLYDETDPSGSFLGSWKNDDEKFGILGAYSVEKITSGRQVLESLSGY
YEYFAADPAQNQESTVGAWGIGSQAFRAERERTSAQVTLQFAPTDNTEFTLDYFNFELDIPHVNHNFLTVGARGSGSTNV
VNNAQGGTASATILPAYASIIYNPVVRHAVNMKSDVLNLTGKYVGDSFTVSGVIGQSTSDGGTQGGSSSWWIPATDQGGK
IGDPAFPNGQGSVDGGFSYDATGPYQVVLTSLDANDASQFKHAQEANYETTVQDHKVTYAQTDFEYQLDHDFINKIAVGI
KYNTSDFERNAFNRNPAEILGFVPNGNLANWSDGVLSGLHSQSGGNVLDSYAKLDEDKWWAFISEKYANGELVEVADLGN
TFTVEEDMLALYAQADFSGEFYRGNFGVRYVNTDQTSTGFADGKPYNESVNYDNWLPSINVAFDLKEDLILRASASSVMA
RNNYSDLKPGLAIAKNFGTATGGNPNLKPYKANQADLGIEWYFTESSMLSAALFYKDIDNVVFVTESTQYIEGCGASESE
WDKCRVIAPANGGSGSVTGLEIQLQHNFESGFGFLTNYTYVDSKSTRPDGTEQMIEGVSENSFNGSLFYEDDLFSARIAY
NWRSEYLGVGNIQNVLNDSYQQVDASIIWHAMENLDVSLEGVNLTNEVVQSYDVKYGLTQNTIEFGSRYFVGASYKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95722; Mature: 95590

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGQLFKSSLLALCIANALFGMSSTAVAAEQQEATAENMEVIQVRGIRRSIEASLNTKR
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCHHH
FADSTVDAITSEDIGKFPDKNIGDALQRISGVTVDRQYGEVSGVTIRGTAPEQSRILLNG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCEEEECC
QTVASTSWYDLGPATRTFNMELLSAEQVNAVEVHKTPTARLEEGALGGTVDLKTRKPLDL
CEEECCCCEECCCCCEEEEEEEECCCCCCEEEEECCCCCHHCCCCCCCEEEECCCCCCCC
DAHTYQVAGELSQSSLYDETDPSGSFLGSWKNDDEKFGILGAYSVEKITSGRQVLESLSG
CCCEEEEHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH
YYEYFAADPAQNQESTVGAWGIGSQAFRAERERTSAQVTLQFAPTDNTEFTLDYFNFELD
HHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEEEEE
IPHVNHNFLTVGARGSGSTNVVNNAQGGTASATILPAYASIIYNPVVRHAVNMKSDVLNL
CCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHH
TGKYVGDSFTVSGVIGQSTSDGGTQGGSSSWWIPATDQGGKIGDPAFPNGQGSVDGGFSY
CHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DATGPYQVVLTSLDANDASQFKHAQEANYETTVQDHKVTYAQTDFEYQLDHDFINKIAVG
CCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCEEEEEECCCEEECCHHHHHHEEEE
IKYNTSDFERNAFNRNPAEILGFVPNGNLANWSDGVLSGLHSQSGGNVLDSYAKLDEDKW
EEECCCCHHHCCCCCCHHHEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCE
WAFISEKYANGELVEVADLGNTFTVEEDMLALYAQADFSGEFYRGNFGVRYVNTDQTSTG
EEEEEHHCCCCCEEEEEECCCEEEECHHHEEEEEECCCCCCEEECCCEEEEEECCCCCCC
FADGKPYNESVNYDNWLPSINVAFDLKEDLILRASASSVMARNNYSDLKPGLAIAKNFGT
CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHCCCCCCCCCCCHHHHHCCCC
ATGGNPNLKPYKANQADLGIEWYFTESSMLSAALFYKDIDNVVFVTESTQYIEGCGASES
CCCCCCCCCCEECCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCC
EWDKCRVIAPANGGSGSVTGLEIQLQHNFESGFGFLTNYTYVDSKSTRPDGTEQMIEGVS
CCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCC
ENSFNGSLFYEDDLFSARIAYNWRSEYLGVGNIQNVLNDSYQQVDASIIWHAMENLDVSL
CCCCCCEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
EGVNLTNEVVQSYDVKYGLTQNTIEFGSRYFVGASYKF
ECCCHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCC
>Mature Secondary Structure 
SEGQLFKSSLLALCIANALFGMSSTAVAAEQQEATAENMEVIQVRGIRRSIEASLNTKR
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCHHH
FADSTVDAITSEDIGKFPDKNIGDALQRISGVTVDRQYGEVSGVTIRGTAPEQSRILLNG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCEEEECC
QTVASTSWYDLGPATRTFNMELLSAEQVNAVEVHKTPTARLEEGALGGTVDLKTRKPLDL
CEEECCCCEECCCCCEEEEEEEECCCCCCEEEEECCCCCHHCCCCCCCEEEECCCCCCCC
DAHTYQVAGELSQSSLYDETDPSGSFLGSWKNDDEKFGILGAYSVEKITSGRQVLESLSG
CCCEEEEHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH
YYEYFAADPAQNQESTVGAWGIGSQAFRAERERTSAQVTLQFAPTDNTEFTLDYFNFELD
HHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEEEEE
IPHVNHNFLTVGARGSGSTNVVNNAQGGTASATILPAYASIIYNPVVRHAVNMKSDVLNL
CCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHH
TGKYVGDSFTVSGVIGQSTSDGGTQGGSSSWWIPATDQGGKIGDPAFPNGQGSVDGGFSY
CHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DATGPYQVVLTSLDANDASQFKHAQEANYETTVQDHKVTYAQTDFEYQLDHDFINKIAVG
CCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCEEEEEECCCEEECCHHHHHHEEEE
IKYNTSDFERNAFNRNPAEILGFVPNGNLANWSDGVLSGLHSQSGGNVLDSYAKLDEDKW
EEECCCCHHHCCCCCCHHHEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCE
WAFISEKYANGELVEVADLGNTFTVEEDMLALYAQADFSGEFYRGNFGVRYVNTDQTSTG
EEEEEHHCCCCCEEEEEECCCEEEECHHHEEEEEECCCCCCEEECCCEEEEEECCCCCCC
FADGKPYNESVNYDNWLPSINVAFDLKEDLILRASASSVMARNNYSDLKPGLAIAKNFGT
CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHCCCCCCCCCCCHHHHHCCCC
ATGGNPNLKPYKANQADLGIEWYFTESSMLSAALFYKDIDNVVFVTESTQYIEGCGASES
CCCCCCCCCCEECCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCC
EWDKCRVIAPANGGSGSVTGLEIQLQHNFESGFGFLTNYTYVDSKSTRPDGTEQMIEGVS
CCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHCCC
ENSFNGSLFYEDDLFSARIAYNWRSEYLGVGNIQNVLNDSYQQVDASIIWHAMENLDVSL
CCCCCCEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
EGVNLTNEVVQSYDVKYGLTQNTIEFGSRYFVGASYKF
ECCCHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA