| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is sam [H]
Identifier: 126173626
GI number: 126173626
Start: 1594699
End: 1595550
Strand: Reverse
Name: sam [H]
Synonym: Sbal_1388
Alternate gene names: 126173626
Gene position: 1595550-1594699 (Counterclockwise)
Preceding gene: 126173628
Following gene: 126173622
Centisome position: 31.12
GC content: 46.13
Gene sequence:
>852_bases ATGCAGCCTCTATTGATGATTTTAGCCGCACAACTCCTGATTGCCAGTGGCAACCTCTTGGTCAAGTTGCTTGAAAATGA TGCCCCCGTGTTCCAACTGGTGCTCTACAGACAACTCTTTGCCACCTTGCTAGTGCTGCCTTTTGTGTGGCGCTTGCAGG GTAATCTCAAACTTAGCCCTTATTACAAAGTGCATCTTGCCCGCGCCCTATTGATTGGACTCGGCAATGCCATTTTTATG CTTGCCATTTTGCATCTACCCCTCGCAACGGTAACCGCCGTGATTTATACCTCACCTTTGTTACTCCTCGTGCTTTCTGC GTTATTTTTGCATGAACGCATAGGCTATCGACGCTCAGTTGCGGGGATCATTGGTTTTACTGGCATTTTACTTATCAGCC AACCAACAGAGTTTAACCTGTATATAGGTTTAGCCTTTTTCGGTGCCATGACGTCGGCATTGAATAGTTTGATTTTAAAG GCCTATTCGACCCATGAACATCCTTTCTCTATGCTCTTTTGGTCTAATGCCTTTGCGATGATATTTCTGATACCGGCGAC CTTATACGAAGGCGCTGATTTTAGTTTGCCAGTGGCGCAGGTGGGATTAACGTTAGGACTATTTTATATTGGCATGACCT ATCTCATCATTCACGCCTATCGACGTGCCGATGCGAGCCAAATGGCGCCTGTAGAATATACCGGATTGATTTTTGCGGCC TTGTTCGGCTGGTGGATACTCGATGAAGAACTCAGCCTAGTGATGTTGATCGGTATCGGATTAGTCATTTTCTCATCCAT ATTGCCCAGCTACAGCGAGCTAAAAGCAAAATGGAAAAGCCGGCGAAGTTGA
Upstream 100 bases:
>100_bases ATATCCCATGCCGTATGGAGCTATTTTAGTCTCAAAGTCCAAACCGTGGCCTGAAATCCAAAATACAACTTAATACTGAC TTATTTTTTGCTGGGATCCT
Downstream 100 bases:
>100_bases CCTCGGCCGGCTCTTTACATCGACTGCTAAGTTAACGCAGCGAGATCAAAACGATTTGTTTTAGAAGCGGAATTTACCGC CAATATACACGCCATCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MQPLLMILAAQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSPYYKVHLARALLIGLGNAIFM LAILHLPLATVTAVIYTSPLLLLVLSALFLHERIGYRRSVAGIIGFTGILLISQPTEFNLYIGLAFFGAMTSALNSLILK AYSTHEHPFSMLFWSNAFAMIFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA LFGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS
Sequences:
>Translated_283_residues MQPLLMILAAQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSPYYKVHLARALLIGLGNAIFM LAILHLPLATVTAVIYTSPLLLLVLSALFLHERIGYRRSVAGIIGFTGILLISQPTEFNLYIGLAFFGAMTSALNSLILK AYSTHEHPFSMLFWSNAFAMIFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA LFGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS >Mature_283_residues MQPLLMILAAQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSPYYKVHLARALLIGLGNAIFM LAILHLPLATVTAVIYTSPLLLLVLSALFLHERIGYRRSVAGIIGFTGILLISQPTEFNLYIGLAFFGAMTSALNSLILK AYSTHEHPFSMLFWSNAFAMIFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA LFGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31490; Mature: 31490
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLLMILAAQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP CCHHHHHHHHHHHHHCCHHHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC YYKVHLARALLIGLGNAIFMLAILHLPLATVTAVIYTSPLLLLVLSALFLHERIGYRRSV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH AGIIGFTGILLISQPTEFNLYIGLAFFGAMTSALNSLILKAYSTHEHPFSMLFWSNAFAM HHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH LFGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MQPLLMILAAQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP CCHHHHHHHHHHHHHCCHHHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC YYKVHLARALLIGLGNAIFMLAILHLPLATVTAVIYTSPLLLLVLSALFLHERIGYRRSV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH AGIIGFTGILLISQPTEFNLYIGLAFFGAMTSALNSLILKAYSTHEHPFSMLFWSNAFAM HHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH LFGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA