| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173579
Identifier: 126173579
GI number: 126173579
Start: 1535968
End: 1537509
Strand: Reverse
Name: 126173579
Synonym: Sbal_1341
Alternate gene names: NA
Gene position: 1537509-1535968 (Counterclockwise)
Preceding gene: 126173584
Following gene: 126173577
Centisome position: 29.99
GC content: 48.51
Gene sequence:
>1542_bases ATGAGTCAGAATAGTCCAAATGCAGGCAACGATCTGCGGGAAGTCAAACAGCTCGGTATGTGGGCCTCCATTACTAGCTT AGGTTATGTGTTTTGGCTGGTCGGCGGGATGGAGTTAGTCGAGCGTATTGCTTACTACGGCGTCAAAGCCAGTGCGGGAC TGTACGCTAAAGCGCCTGAGTCTGCGGGCGGCCTTGGCATCAGCCTAAGCGACTACGGCATTATTATTTCCCTGTGGGCG ATCATGCAAACCTTTGTGCCCGTGTTCACGGGTGGCATCTCTGACCGCGTCGGCTACAAAGAAACCATCTTTGACTCCAC CATCATTAAAATTTTTGGCTATCTGGTGATGGCATTCTTTCCCAGTTTTTGGGGTTTCCTTGCTGGCGCATTACTCCTTG CCATCGGCACAGGGATATTTAAACCGGGTATTCAAGGCACCTTAGTGCTGTCCACCAATCGCAATAATACCTCTATGGCT TGGGGGATTTTTTACCAAGTCGTCAACATTGGTGGTTTCCTCGGGCCGTTAGTGGCCGTGCACATGCGCCAATTGTCGTG GGACAATGTGTTTTTCGCCTGCGCCGCGATTATCTCGCTCAACTTCTTATTTTTACTGACTTATACAGAGCCTGGTAAAG CCGAGCGACTAGAGCGTAATAAACAAATCAAGTCGGGTGAAGTCAAACAAGAAGCCCTGTGGCGCGATGCTTGGCGTGAG CTTAAAAAACCGATAGTGATCTACTACATGTTGGTATTTTCAGGCTTTTGGTTCCTGTTCAATGCCCTATTCGATGTGCT GCCTATCCATATTTCCGAATGGGTCGATACCAGTGTAATCGTCACATCCCTTTTTGGCAGCGAAGGTACCAGTAACGGCA TTCTGCAATTTTGGCTTGGCCTCAATAACGAAGGCACTAAGGTGATGCCCGAAGGCATGCTCAACCTTAATGCTGGCCTG ATCATGACCTGCTGCTTTATCGTCGCCGCACTGACGGCTAAATACCGTATTACTACCGCCATGTTTATGGGTTGTTTACT GAGTATTTTGGCCTTTGTGTTTATCGGAGCCTTCCATGCGGCTTGGTTTATCGTGCTCGCAATTGCTATGTTCTCTATTG GCGAAATGATGATTAGCCCGAAGAAAAATGAGTTTATGGGCAACATAGCGCCCGAAGGTAAAAAAGCCATGTACTTGGGC TTTGTGATGTTACCCCAAGGGATCGGCTGGGGATTAGAAGGCTACTTTGGCCCTAAACTCTATGAAATTTATGCATCGAA AGAATTGTTTTCGCGGGATTTATTGCTAGAGCGCGGCATGAACAGCACTGAGATTAGCGCTATTCCCCAAGGTGAAGCCT TTACTACCTTGGTGAGCTACACAGGTGAAAGCGCCCAGGATCTCACCCAACTGCTGTACCACAGCCATAACATTGGCATG GCGTGGTACATCATCGCTGCCATAGGGACTATCTCAGCGGTGGGGATTTTTATCTATGGTAAGTGGTTACTCACACTGCA AAGAGCCCAACAAGCCGCCTAA
Upstream 100 bases:
>100_bases GTATTTTAGCAAGATGAAATGATCAACTATAAAAATTTAAGATATTGATAATTAATGGCTTAATTAATAATAAATTCAAT AACAATAATAAGGGAAGGAC
Downstream 100 bases:
>100_bases GCGGGACTCGCTAACCTCATTCGAGGTAAGGGCGATAAAAACAAGATAAGGGCTAAATAAAGGCAAGGTGAGGAGCGATC TTCATCTTGCCTTATCAGTA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Permease
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MSQNSPNAGNDLREVKQLGMWASITSLGYVFWLVGGMELVERIAYYGVKASAGLYAKAPESAGGLGISLSDYGIIISLWA IMQTFVPVFTGGISDRVGYKETIFDSTIIKIFGYLVMAFFPSFWGFLAGALLLAIGTGIFKPGIQGTLVLSTNRNNTSMA WGIFYQVVNIGGFLGPLVAVHMRQLSWDNVFFACAAIISLNFLFLLTYTEPGKAERLERNKQIKSGEVKQEALWRDAWRE LKKPIVIYYMLVFSGFWFLFNALFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLGLNNEGTKVMPEGMLNLNAGL IMTCCFIVAALTAKYRITTAMFMGCLLSILAFVFIGAFHAAWFIVLAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLG FVMLPQGIGWGLEGYFGPKLYEIYASKELFSRDLLLERGMNSTEISAIPQGEAFTTLVSYTGESAQDLTQLLYHSHNIGM AWYIIAAIGTISAVGIFIYGKWLLTLQRAQQAA
Sequences:
>Translated_513_residues MSQNSPNAGNDLREVKQLGMWASITSLGYVFWLVGGMELVERIAYYGVKASAGLYAKAPESAGGLGISLSDYGIIISLWA IMQTFVPVFTGGISDRVGYKETIFDSTIIKIFGYLVMAFFPSFWGFLAGALLLAIGTGIFKPGIQGTLVLSTNRNNTSMA WGIFYQVVNIGGFLGPLVAVHMRQLSWDNVFFACAAIISLNFLFLLTYTEPGKAERLERNKQIKSGEVKQEALWRDAWRE LKKPIVIYYMLVFSGFWFLFNALFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLGLNNEGTKVMPEGMLNLNAGL IMTCCFIVAALTAKYRITTAMFMGCLLSILAFVFIGAFHAAWFIVLAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLG FVMLPQGIGWGLEGYFGPKLYEIYASKELFSRDLLLERGMNSTEISAIPQGEAFTTLVSYTGESAQDLTQLLYHSHNIGM AWYIIAAIGTISAVGIFIYGKWLLTLQRAQQAA >Mature_512_residues SQNSPNAGNDLREVKQLGMWASITSLGYVFWLVGGMELVERIAYYGVKASAGLYAKAPESAGGLGISLSDYGIIISLWAI MQTFVPVFTGGISDRVGYKETIFDSTIIKIFGYLVMAFFPSFWGFLAGALLLAIGTGIFKPGIQGTLVLSTNRNNTSMAW GIFYQVVNIGGFLGPLVAVHMRQLSWDNVFFACAAIISLNFLFLLTYTEPGKAERLERNKQIKSGEVKQEALWRDAWREL KKPIVIYYMLVFSGFWFLFNALFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLGLNNEGTKVMPEGMLNLNAGLI MTCCFIVAALTAKYRITTAMFMGCLLSILAFVFIGAFHAAWFIVLAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLGF VMLPQGIGWGLEGYFGPKLYEIYASKELFSRDLLLERGMNSTEISAIPQGEAFTTLVSYTGESAQDLTQLLYHSHNIGMA WYIIAAIGTISAVGIFIYGKWLLTLQRAQQAA
Specific function: Unknown
COG id: COG3104
COG function: function code E; Dipeptide/tripeptide permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56643; Mature: 56512
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNSPNAGNDLREVKQLGMWASITSLGYVFWLVGGMELVERIAYYGVKASAGLYAKAPE CCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCC SAGGLGISLSDYGIIISLWAIMQTFVPVFTGGISDRVGYKETIFDSTIIKIFGYLVMAFF CCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PSFWGFLAGALLLAIGTGIFKPGIQGTLVLSTNRNNTSMAWGIFYQVVNIGGFLGPLVAV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH HMRQLSWDNVFFACAAIISLNFLFLLTYTEPGKAERLERNKQIKSGEVKQEALWRDAWRE HHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH LKKPIVIYYMLVFSGFWFLFNALFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC LNNEGTKVMPEGMLNLNAGLIMTCCFIVAALTAKYRITTAMFMGCLLSILAFVFIGAFHA CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWFIVLAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLGFVMLPQGIGWGLEGYFGPKL HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHH YEIYASKELFSRDLLLERGMNSTEISAIPQGEAFTTLVSYTGESAQDLTQLLYHSHNIGM HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCH AWYIIAAIGTISAVGIFIYGKWLLTLQRAQQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQNSPNAGNDLREVKQLGMWASITSLGYVFWLVGGMELVERIAYYGVKASAGLYAKAPE CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCC SAGGLGISLSDYGIIISLWAIMQTFVPVFTGGISDRVGYKETIFDSTIIKIFGYLVMAFF CCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PSFWGFLAGALLLAIGTGIFKPGIQGTLVLSTNRNNTSMAWGIFYQVVNIGGFLGPLVAV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH HMRQLSWDNVFFACAAIISLNFLFLLTYTEPGKAERLERNKQIKSGEVKQEALWRDAWRE HHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH LKKPIVIYYMLVFSGFWFLFNALFDVLPIHISEWVDTSVIVTSLFGSEGTSNGILQFWLG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC LNNEGTKVMPEGMLNLNAGLIMTCCFIVAALTAKYRITTAMFMGCLLSILAFVFIGAFHA CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWFIVLAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLGFVMLPQGIGWGLEGYFGPKL HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHH YEIYASKELFSRDLLLERGMNSTEISAIPQGEAFTTLVSYTGESAQDLTQLLYHSHNIGM HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCH AWYIIAAIGTISAVGIFIYGKWLLTLQRAQQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA