| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is fct [H]
Identifier: 126173553
GI number: 126173553
Start: 1495024
End: 1497489
Strand: Reverse
Name: fct [H]
Synonym: Sbal_1315
Alternate gene names: 126173553
Gene position: 1497489-1495024 (Counterclockwise)
Preceding gene: 126173557
Following gene: 126173548
Centisome position: 29.21
GC content: 45.5
Gene sequence:
>2466_bases ATGAAACCATTTCGTTTGTCGCTAACCGCACTCGCCTGCCTTTCTGTTTTATCGCAAACCGCACACGCCGAAGCCAACTC GATATCAGCAAATGCTGAAGCCAACGTTGAGCGCATCACGGTTTATGGCAGACAGAACTCAGTAGTGAAGAATTCAGGGC TGGCGACTAAATCCGACATGTCTCTTATGGAAACCCCAGCAGCTGTAGTGATTGTAGACCAAGAGCTGATCGAAACCCAA GGTACAGATAATCTGCAGGACTTGATCCGTAACATCAGTGGCGTAACTCAAGCGGGAAATAACTATGGCATTGGTGACAA CATAGTCATCCGTGGTTTAGGCGCAAATTACACCTATGACGGTATGTATGGCGGTGCAGGCCTAGGAAATACCTTCAACC CCACGCGCTCTTTAACCAACGTTGAATCCGTTGAGGTATTAAAAGGCCCAGCGACTGGACTCTATGGCATGGGAAGTGCT GGCGGCGTGATCAATCTGATTGAAAAGAAACCGCAGTTTGAGTCAAAGCATAAGTTCAGCGCCGAAATGGGCCAATGGGA CACCTACTCCCTTGCTCTGGATAGCACGGGCGGCCTGAGCGATGATGTCGCCTACCGTTTAGTCGCCAAATCTGGCCGCA GTGATGGGTATCGCGATATCGGTACAGACAGAGACGAAATCTATGGCGCCTTAAAATGGGTATTAAGTGATAGCCAAGAT TTAATGCTTTCAGGTGCTTACATAAAAGATGCTATTGCCGTTGATTCAATTGGTCACCCGATTCGGATTTACAATGCAGA ATCTGTCGGCGGTAAGAGCGCGGGCGAGGTCACGTGGCAAGATCTGGTCAATGATCCCAATGGTAATGGTCTACAACTCA CCGATGCACAGCGTCAGCAGTTAGCGGCCTCGTTGTCGGGCGCTGACGGCTTAACCCCCTATTCGTTTGGTGATGCAGGG CTGATTTCACCCATGGCGAAGGACAATGAGGGTGAAGAGTTAAGATTTAAACTGACCCATAATATCTATTTCACTGACAA TTTGTTCCTCAATCAACAATTGCAGTATCGCGACTACACGTCAGGTTTCGCCCGCCAAACTGGCGCCTATAACTACGTCT ATTGGAAGCGTAACATCAAGGTTAAAAACGTTCTTACCGACGTGATTAACGAAGAGCCTAGATCGCCATTAGTTGAAAAT GGCGTACTTTATCCTTTTGCTGCAAGACGTCAGGAATACCGTAAAGTCGATGCCGACGAGACGTCTTGGCAGTACTTTGC CGATCTACGTTATGACTTCCAAATTGGCAATATAGACAATGAATTATTGGTCAATGCCAACTATGAAGACCGTAATATTC GTTTCCAGCAATATTCTATCTTCGATGCCGATCAAATCTATAAAAATAAGGATGGAGACATTACTTATCAAGGTTCCCTG CCTTATATTTACGACATCCGTAATCCTAATTGGGGCACAGGTAAGTTTGAAGACTATGACCCACTCAAGACCGCGAACTA TGACAAAAAGGTCAGCGCTTGGGGTTTAGGCGTACAACACGTGGGATATTTAGGACATGGCTTCACCACACGTGTAGGTG TCGCCTTTAACGAGATAAAACAAAGTTATGAACACTTAGGCCTTGATCCGCGCTACAGCATTAGCCAATCCCAAGCGACT CCAGAGGCCGATACCACAGATAACGGCATGACCTATAACTTAGGCTTGACCTACATGCCGATAGAGGATTTATCATTCTT TATCAATCACTCAAAGGGACGCACCGCCTACAGTGTGCTCGATGCAGTAAAAGATAATGCTACCAACCGAGATGATTCAG AATCGATTAGTAATGATTTAGGTATGCGCTTTAAGGCATTTGAGGATCAATTACTGGGCTCACTGGTATTGTTTAAAAGC TCGCGCACTAATGTCGCCTATAACAATCCTGATTATACCAATGGCATATTAACACCTAACATCCCAGTGTATTTGTACAA TGGCAGCGAAGACACTCAAGGTATTGAACTCGATCTTAACGCATATATTAATGAGGAGTGGCGCCTTAACCTCAACGGCA TGTATCAAGATGCGAATGACAAACAGAATCCTAAGGATGGAGATAACTATGAAAACCAGCAAAAAGGTGTGCCTTATGTC AGCGCCAGTGCTTGGGTTACCTATGGCGCGAATTGGTTTGCGCTACAGAGTCCAATCGAATTAAGCCTAGGAGCAAAATA CGTTGGCGATCGTAGTACACACTCTAGCTCATTTGGAATTCCAGACGGTTACGTGCCTAGCTATACTGTCGTCGACTCGG CGGTGAGTTACAGCACTAATTCTTGGAAAATCCAGCTTAATATCAATAATCTATTCAATAAAGACTATTACAGTAAAGCG ATGTTCTTAGGTGGTATGCCGGGTGAAGAACGCAACGTCAAACTGCAATACAGCTATAGTTTTTGA
Upstream 100 bases:
>100_bases GGCAGCACTGCACATTTTGACAATAACAACTGAAACATTTGTTGCCAACTTAAATGCAAATCATTACTATTCGCGACCTA TTTATTTGGGGGAACCATTA
Downstream 100 bases:
>100_bases GCGCTAAATAGATTTAAGCGCTAAACTGCAGCGCGAAAGTCGATATGTTTCCAACAAAAAAGAGAGCATTTATGCTCTCT TTTGACATCTAAATCCTTAA
Product: TonB-dependent receptor plug
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 821; Mature: 821
Protein sequence:
>821_residues MKPFRLSLTALACLSVLSQTAHAEANSISANAEANVERITVYGRQNSVVKNSGLATKSDMSLMETPAAVVIVDQELIETQ GTDNLQDLIRNISGVTQAGNNYGIGDNIVIRGLGANYTYDGMYGGAGLGNTFNPTRSLTNVESVEVLKGPATGLYGMGSA GGVINLIEKKPQFESKHKFSAEMGQWDTYSLALDSTGGLSDDVAYRLVAKSGRSDGYRDIGTDRDEIYGALKWVLSDSQD LMLSGAYIKDAIAVDSIGHPIRIYNAESVGGKSAGEVTWQDLVNDPNGNGLQLTDAQRQQLAASLSGADGLTPYSFGDAG LISPMAKDNEGEELRFKLTHNIYFTDNLFLNQQLQYRDYTSGFARQTGAYNYVYWKRNIKVKNVLTDVINEEPRSPLVEN GVLYPFAARRQEYRKVDADETSWQYFADLRYDFQIGNIDNELLVNANYEDRNIRFQQYSIFDADQIYKNKDGDITYQGSL PYIYDIRNPNWGTGKFEDYDPLKTANYDKKVSAWGLGVQHVGYLGHGFTTRVGVAFNEIKQSYEHLGLDPRYSISQSQAT PEADTTDNGMTYNLGLTYMPIEDLSFFINHSKGRTAYSVLDAVKDNATNRDDSESISNDLGMRFKAFEDQLLGSLVLFKS SRTNVAYNNPDYTNGILTPNIPVYLYNGSEDTQGIELDLNAYINEEWRLNLNGMYQDANDKQNPKDGDNYENQQKGVPYV SASAWVTYGANWFALQSPIELSLGAKYVGDRSTHSSSFGIPDGYVPSYTVVDSAVSYSTNSWKIQLNINNLFNKDYYSKA MFLGGMPGEERNVKLQYSYSF
Sequences:
>Translated_821_residues MKPFRLSLTALACLSVLSQTAHAEANSISANAEANVERITVYGRQNSVVKNSGLATKSDMSLMETPAAVVIVDQELIETQ GTDNLQDLIRNISGVTQAGNNYGIGDNIVIRGLGANYTYDGMYGGAGLGNTFNPTRSLTNVESVEVLKGPATGLYGMGSA GGVINLIEKKPQFESKHKFSAEMGQWDTYSLALDSTGGLSDDVAYRLVAKSGRSDGYRDIGTDRDEIYGALKWVLSDSQD LMLSGAYIKDAIAVDSIGHPIRIYNAESVGGKSAGEVTWQDLVNDPNGNGLQLTDAQRQQLAASLSGADGLTPYSFGDAG LISPMAKDNEGEELRFKLTHNIYFTDNLFLNQQLQYRDYTSGFARQTGAYNYVYWKRNIKVKNVLTDVINEEPRSPLVEN GVLYPFAARRQEYRKVDADETSWQYFADLRYDFQIGNIDNELLVNANYEDRNIRFQQYSIFDADQIYKNKDGDITYQGSL PYIYDIRNPNWGTGKFEDYDPLKTANYDKKVSAWGLGVQHVGYLGHGFTTRVGVAFNEIKQSYEHLGLDPRYSISQSQAT PEADTTDNGMTYNLGLTYMPIEDLSFFINHSKGRTAYSVLDAVKDNATNRDDSESISNDLGMRFKAFEDQLLGSLVLFKS SRTNVAYNNPDYTNGILTPNIPVYLYNGSEDTQGIELDLNAYINEEWRLNLNGMYQDANDKQNPKDGDNYENQQKGVPYV SASAWVTYGANWFALQSPIELSLGAKYVGDRSTHSSSFGIPDGYVPSYTVVDSAVSYSTNSWKIQLNINNLFNKDYYSKA MFLGGMPGEERNVKLQYSYSF >Mature_821_residues MKPFRLSLTALACLSVLSQTAHAEANSISANAEANVERITVYGRQNSVVKNSGLATKSDMSLMETPAAVVIVDQELIETQ GTDNLQDLIRNISGVTQAGNNYGIGDNIVIRGLGANYTYDGMYGGAGLGNTFNPTRSLTNVESVEVLKGPATGLYGMGSA GGVINLIEKKPQFESKHKFSAEMGQWDTYSLALDSTGGLSDDVAYRLVAKSGRSDGYRDIGTDRDEIYGALKWVLSDSQD LMLSGAYIKDAIAVDSIGHPIRIYNAESVGGKSAGEVTWQDLVNDPNGNGLQLTDAQRQQLAASLSGADGLTPYSFGDAG LISPMAKDNEGEELRFKLTHNIYFTDNLFLNQQLQYRDYTSGFARQTGAYNYVYWKRNIKVKNVLTDVINEEPRSPLVEN GVLYPFAARRQEYRKVDADETSWQYFADLRYDFQIGNIDNELLVNANYEDRNIRFQQYSIFDADQIYKNKDGDITYQGSL PYIYDIRNPNWGTGKFEDYDPLKTANYDKKVSAWGLGVQHVGYLGHGFTTRVGVAFNEIKQSYEHLGLDPRYSISQSQAT PEADTTDNGMTYNLGLTYMPIEDLSFFINHSKGRTAYSVLDAVKDNATNRDDSESISNDLGMRFKAFEDQLLGSLVLFKS SRTNVAYNNPDYTNGILTPNIPVYLYNGSEDTQGIELDLNAYINEEWRLNLNGMYQDANDKQNPKDGDNYENQQKGVPYV SASAWVTYGANWFALQSPIELSLGAKYVGDRSTHSSSFGIPDGYVPSYTVVDSAVSYSTNSWKIQLNINNLFNKDYYSKA MFLGGMPGEERNVKLQYSYSF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787723, Length=235, Percent_Identity=28.5106382978723, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 91203; Mature: 91203
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFRLSLTALACLSVLSQTAHAEANSISANAEANVERITVYGRQNSVVKNSGLATKSDM CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCC SLMETPAAVVIVDQELIETQGTDNLQDLIRNISGVTQAGNNYGIGDNIVIRGLGANYTYD HHHCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEC GMYGGAGLGNTFNPTRSLTNVESVEVLKGPATGLYGMGSAGGVINLIEKKPQFESKHKFS CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH AEMGQWDTYSLALDSTGGLSDDVAYRLVAKSGRSDGYRDIGTDRDEIYGALKWVLSDSQD HHCCCCCEEEEEECCCCCCCHHHHHHEEHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC LMLSGAYIKDAIAVDSIGHPIRIYNAESVGGKSAGEVTWQDLVNDPNGNGLQLTDAQRQQ EEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEHHHHCCCCCCCCEEECHHHHHH LAASLSGADGLTPYSFGDAGLISPMAKDNEGEELRFKLTHNIYFTDNLFLNQQLQYRDYT HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEECCEECCCHHH SGFARQTGAYNYVYWKRNIKVKNVLTDVINEEPRSPLVENGVLYPFAARRQEYRKVDADE CHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHCCEECCHHHHHHHHHCCCCCC TSWQYFADLRYDFQIGNIDNELLVNANYEDRNIRFQQYSIFDADQIYKNKDGDITYQGSL CCEEEEEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCHHHHHCCCCCCEEEECCC PYIYDIRNPNWGTGKFEDYDPLKTANYDKKVSAWGLGVQHVGYLGHGFTTRVGVAFNEIK CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHH QSYEHLGLDPRYSISQSQATPEADTTDNGMTYNLGLTYMPIEDLSFFINHSKGRTAYSVL HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEHHHHHEEEECCCCCHHHHHH DAVKDNATNRDDSESISNDLGMRFKAFEDQLLGSLVLFKSSRTNVAYNNPDYTNGILTPN HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHCEEEEEECCCCCEEECCCCCCCCEECCC IPVYLYNGSEDTQGIELDLNAYINEEWRLNLNGMYQDANDKQNPKDGDNYENQQKGVPYV CCEEEECCCCCCCCEEEEEEEEECCCEEEEECEEEECCCCCCCCCCCCCCCCHHCCCCEE SASAWVTYGANWFALQSPIELSLGAKYVGDRSTHSSSFGIPDGYVPSYTVVDSAVSYSTN ECCEEEEECCCEEEECCCCEEECCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC SWKIQLNINNLFNKDYYSKAMFLGGMPGEERNVKLQYSYSF CEEEEEEECHHCCCCHHHHHHEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MKPFRLSLTALACLSVLSQTAHAEANSISANAEANVERITVYGRQNSVVKNSGLATKSDM CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCC SLMETPAAVVIVDQELIETQGTDNLQDLIRNISGVTQAGNNYGIGDNIVIRGLGANYTYD HHHCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEC GMYGGAGLGNTFNPTRSLTNVESVEVLKGPATGLYGMGSAGGVINLIEKKPQFESKHKFS CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH AEMGQWDTYSLALDSTGGLSDDVAYRLVAKSGRSDGYRDIGTDRDEIYGALKWVLSDSQD HHCCCCCEEEEEECCCCCCCHHHHHHEEHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC LMLSGAYIKDAIAVDSIGHPIRIYNAESVGGKSAGEVTWQDLVNDPNGNGLQLTDAQRQQ EEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEHHHHCCCCCCCCEEECHHHHHH LAASLSGADGLTPYSFGDAGLISPMAKDNEGEELRFKLTHNIYFTDNLFLNQQLQYRDYT HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEECCEECCCHHH SGFARQTGAYNYVYWKRNIKVKNVLTDVINEEPRSPLVENGVLYPFAARRQEYRKVDADE CHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHCCEECCHHHHHHHHHCCCCCC TSWQYFADLRYDFQIGNIDNELLVNANYEDRNIRFQQYSIFDADQIYKNKDGDITYQGSL CCEEEEEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCHHHHHCCCCCCEEEECCC PYIYDIRNPNWGTGKFEDYDPLKTANYDKKVSAWGLGVQHVGYLGHGFTTRVGVAFNEIK CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHH QSYEHLGLDPRYSISQSQATPEADTTDNGMTYNLGLTYMPIEDLSFFINHSKGRTAYSVL HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEHHHHHEEEECCCCCHHHHHH DAVKDNATNRDDSESISNDLGMRFKAFEDQLLGSLVLFKSSRTNVAYNNPDYTNGILTPN HHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHCEEEEEECCCCCEEECCCCCCCCEECCC IPVYLYNGSEDTQGIELDLNAYINEEWRLNLNGMYQDANDKQNPKDGDNYENQQKGVPYV CCEEEECCCCCCCCEEEEEEEEECCCEEEEECEEEECCCCCCCCCCCCCCCCHHCCCCEE SASAWVTYGANWFALQSPIELSLGAKYVGDRSTHSSSFGIPDGYVPSYTVVDSAVSYSTN ECCEEEEECCCEEEECCCCEEECCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC SWKIQLNINNLFNKDYYSKAMFLGGMPGEERNVKLQYSYSF CEEEEEEECHHCCCCHHHHHHEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]