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The map label for this gene is yugI [H]

Identifier: 125624444

GI number: 125624444

Start: 1623558

End: 1624028

Strand: Reverse

Name: yugI [H]

Synonym: llmg_1645

Alternate gene names: 125624444

Gene position: 1624028-1623558 (Counterclockwise)

Preceding gene: 125624445

Following gene: 125624443

Centisome position: 64.2

GC content: 32.91

Gene sequence:

>471_bases
ATGTTGTCATTGAATCAGTTGAGATTATCGAGCCATAAAATGGATAAAAAAAGTCCTAAAATCGGAGATATTGTTGAAGT
TGAAATCATTGGAATGCAGGATTATGGTGCATTTGTAAAGTTTTTCCTGCAAAATCCAGAAACCAATGAAAAAATTGAAC
AAAAAGGTTTGATTCATATTTCTGAAATTCAATCCGGATATGTCAAGAGCATCCATGATATTGCTAAAATTGGGCAAAAA
ATAATGGCCCAAATCATCGATATTGATGAATACAATGGCAAAATTAGCTTGTCAATCCGAAGTCTTGAAAAAAATCCACA
AGTTCATCATATCTACCGAAAAAAACATTTTACTGATTCACGAGACAAGATTGGCTTTAAAATCCTTGCTCACTCTCTAC
CTAGTTGGATTGAAGAAAATGAGGCCTATCTTAAAGCAAAAAAAAATGCCCAAAGTGAGGATTTTCTTTGA

Upstream 100 bases:

>100_bases
CGTCATACTGTTTTTGGTCAATTAGTTGACGAAGAAAGCTACAAAGTCCTTGATAAAATCGTAGCTGTACGTGTGGGTGC
ACAAGATAAACCAGTTGACG

Downstream 100 bases:

>100_bases
ATGATAACGTATTAAGATATGTCAAACGAGTTTTTAATGTAATTACCATCTTAGGTTTTGTGGCTACAATTGTCGGCGGA
GTTTATCTGTGGCGACTGGG

Product: general stress protein GSP13

Products: NA

Alternate protein names: GSP13 [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLSLNQLRLSSHKMDKKSPKIGDIVEVEIIGMQDYGAFVKFFLQNPETNEKIEQKGLIHISEIQSGYVKSIHDIAKIGQK
IMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKILAHSLPSWIEENEAYLKAKKNAQSEDFL

Sequences:

>Translated_156_residues
MLSLNQLRLSSHKMDKKSPKIGDIVEVEIIGMQDYGAFVKFFLQNPETNEKIEQKGLIHISEIQSGYVKSIHDIAKIGQK
IMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKILAHSLPSWIEENEAYLKAKKNAQSEDFL
>Mature_156_residues
MLSLNQLRLSSHKMDKKSPKIGDIVEVEIIGMQDYGAFVKFFLQNPETNEKIEQKGLIHISEIQSGYVKSIHDIAKIGQK
IMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKILAHSLPSWIEENEAYLKAKKNAQSEDFL

Specific function: Unknown

COG id: COG1098

COG function: function code J; Predicted RNA binding protein (contains ribosomal protein S1 domain)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 17979; Mature: 17979

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLNQLRLSSHKMDKKSPKIGDIVEVEIIGMQDYGAFVKFFLQNPETNEKIEQKGLIHI
CCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCEEE
SEIQSGYVKSIHDIAKIGQKIMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKKHFTDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC
RDKIGFKILAHSLPSWIEENEAYLKAKKNAQSEDFL
CHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLSLNQLRLSSHKMDKKSPKIGDIVEVEIIGMQDYGAFVKFFLQNPETNEKIEQKGLIHI
CCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCEEE
SEIQSGYVKSIHDIAKIGQKIMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKKHFTDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC
RDKIGFKILAHSLPSWIEENEAYLKAKKNAQSEDFL
CHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 9298659 [H]