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The map label for this gene is ybjQ [C]

Identifier: 125624397

GI number: 125624397

Start: 1570244

End: 1570570

Strand: Reverse

Name: ybjQ [C]

Synonym: llmg_1596

Alternate gene names: 125624397

Gene position: 1570570-1570244 (Counterclockwise)

Preceding gene: 125624398

Following gene: 125624396

Centisome position: 62.09

GC content: 39.14

Gene sequence:

>327_bases
ATGGATGATATGCTTATTGTGACCACCAATGAGGTTGCGGGTTATCGAATTGTAGAAGTTTATGGTGAAGTTTTTGGCTT
AACGACTCGTTCTCGGAATTTATTTTCAAGTGCAGGTCAACAAATGAAGACTGTTGTGGGTGGTGAAATAAATGGTTATA
CAAAGCTTCAACATGATACTCGTGAAACTTCGATTGGTCGAATGAAAGAAGAAGCGAAAGCAAAAGGAGCCAATGCGATT
GTTGCAATGCGCTTTGACTCATCAACTTTCCAAAATATTGACTCTGTCGCTGCTTACGGAACAGCCGTTAAAATTGAGAA
AATCTAA

Upstream 100 bases:

>100_bases
TGCTCTACCAAAAATAGAAATAGTAAATAAAAATCGTTGATTATTTTTAAAGTCGTGCTATAATTATCTTAAATTTATGC
TTTACGAAAAGAGGAACATG

Downstream 100 bases:

>100_bases
AGATTAGCTGAGGCTAGTCTTTTTTTATTTCCGAACAATTTTTGAACAAAGGAACTATATTAAATATTTTTGAGAGTAAA
TTATAGAAAAATTTGTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDDMLIVTTNEVAGYRIVEVYGEVFGLTTRSRNLFSSAGQQMKTVVGGEINGYTKLQHDTRETSIGRMKEEAKAKGANAI
VAMRFDSSTFQNIDSVAAYGTAVKIEKI

Sequences:

>Translated_108_residues
MDDMLIVTTNEVAGYRIVEVYGEVFGLTTRSRNLFSSAGQQMKTVVGGEINGYTKLQHDTRETSIGRMKEEAKAKGANAI
VAMRFDSSTFQNIDSVAAYGTAVKIEKI
>Mature_108_residues
MDDMLIVTTNEVAGYRIVEVYGEVFGLTTRSRNLFSSAGQQMKTVVGGEINGYTKLQHDTRETSIGRMKEEAKAKGANAI
VAMRFDSSTFQNIDSVAAYGTAVKIEKI

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1006_LACLS (Q02ZS8)

Other databases:

- EMBL:   CP000425
- RefSeq:   YP_808966.1
- ProteinModelPortal:   Q02ZS8
- SMR:   Q02ZS8
- STRING:   Q02ZS8
- GeneID:   4432774
- GenomeReviews:   CP000425_GR
- KEGG:   llc:LACR_1006
- eggNOG:   COG0393
- HOGENOM:   HBG339160
- OMA:   YGTAVRL
- ProtClustDB:   PRK00967
- BioCyc:   LLAC272622:LACR_1006-MONOMER
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 11830; Mature: 11830

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDMLIVTTNEVAGYRIVEVYGEVFGLTTRSRNLFSSAGQQMKTVVGGEINGYTKLQHDT
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC
RETSIGRMKEEAKAKGANAIVAMRFDSSTFQNIDSVAAYGTAVKIEKI
CHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MDDMLIVTTNEVAGYRIVEVYGEVFGLTTRSRNLFSSAGQQMKTVVGGEINGYTKLQHDT
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC
RETSIGRMKEEAKAKGANAIVAMRFDSSTFQNIDSVAAYGTAVKIEKI
CHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA