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The map label for this gene is yafL [C]

Identifier: 125624395

GI number: 125624395

Start: 1567714

End: 1568289

Strand: Reverse

Name: yafL [C]

Synonym: llmg_1594

Alternate gene names: 125624395

Gene position: 1568289-1567714 (Counterclockwise)

Preceding gene: 125624396

Following gene: 125624394

Centisome position: 62.0

GC content: 40.45

Gene sequence:

>576_bases
ATGTTGAAAAAAATAATTATTTCCGCAGCACTTATGGCAAGTCTTAGTGCTGCCATGATTGCTAATCCTGCAAAAGCAGA
TTCAGTATTTGAAGACAATGACGCGCAAAGTTCACTGACAGATTTGTCAGCAGCGACTAGTTCACTTGATGTTTTAACAA
AAACAATGAATGACACAGTCAGTGCCGTATCCAAAGTAGAAAAAACACAAAGTGTTGCCAAAGAAGTTCAATCACGAGCT
GATAAGCTTGTAAGTACAGCTAAAAAATATATGGGTGTTCCCTATGTTTGGGGTGGAACTACACCAGCCGGCTTTGATTG
CTCAGGATTCACAAGCTATGTCTATAGAGAAGTTTTAGGTAAAGAAATTGGTCGTACCACTTGGGACCAAATCGCAAGTG
GCAAACAAGTAGCCCTCGACCAAGCCAAAGTTGGAGATTTGATTATCTTTTACGGTGGGGACCATGTAGGAATTTATCTT
GGAAATGGTCAGGTTATACATGCCCCACAACCAGGAGAATCAGTTAAGATCAGTTCAGTTACCGATATGCCAGCTGATTT
TGCCTTAGAATACTAA

Upstream 100 bases:

>100_bases
GTAAAATTAAGTGTAAATTTTTTTGGTAACAAATTTACAAAAAATTAAAAGCTTGTAAAACCGCTTGTCAGGCGGTTTTT
TTGTGTTATACTTGCTAACA

Downstream 100 bases:

>100_bases
ATATAATAGAAGAAAGTAATGATATATCGTTACTTTTTTTATTTGTTATTCTTATAGCCAAAAGTGGCTATAAGTTTTTT
TTATGGCAAATTGGTTAAGT

Product: gamma-glutamyl-diamino acid-endopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MLKKIIISAALMASLSAAMIANPAKADSVFEDNDAQSSLTDLSAATSSLDVLTKTMNDTVSAVSKVEKTQSVAKEVQSRA
DKLVSTAKKYMGVPYVWGGTTPAGFDCSGFTSYVYREVLGKEIGRTTWDQIASGKQVALDQAKVGDLIIFYGGDHVGIYL
GNGQVIHAPQPGESVKISSVTDMPADFALEY

Sequences:

>Translated_191_residues
MLKKIIISAALMASLSAAMIANPAKADSVFEDNDAQSSLTDLSAATSSLDVLTKTMNDTVSAVSKVEKTQSVAKEVQSRA
DKLVSTAKKYMGVPYVWGGTTPAGFDCSGFTSYVYREVLGKEIGRTTWDQIASGKQVALDQAKVGDLIIFYGGDHVGIYL
GNGQVIHAPQPGESVKISSVTDMPADFALEY
>Mature_191_residues
MLKKIIISAALMASLSAAMIANPAKADSVFEDNDAQSSLTDLSAATSSLDVLTKTMNDTVSAVSKVEKTQSVAKEVQSRA
DKLVSTAKKYMGVPYVWGGTTPAGFDCSGFTSYVYREVLGKEIGRTTWDQIASGKQVALDQAKVGDLIIFYGGDHVGIYL
GNGQVIHAPQPGESVKISSVTDMPADFALEY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C40 family [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=107, Percent_Identity=37.3831775700935, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788501, Length=82, Percent_Identity=45.1219512195122, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1787944, Length=100, Percent_Identity=36, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1788001, Length=86, Percent_Identity=39.5348837209302, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 20251; Mature: 20251

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIIISAALMASLSAAMIANPAKADSVFEDNDAQSSLTDLSAATSSLDVLTKTMNDTV
CHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVSKVEKTQSVAKEVQSRADKLVSTAKKYMGVPYVWGGTTPAGFDCSGFTSYVYREVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
KEIGRTTWDQIASGKQVALDQAKVGDLIIFYGGDHVGIYLGNGQVIHAPQPGESVKISSV
HHHCCCHHHHHHCCCCEECCHHCCCCEEEEECCCEEEEEECCCEEEECCCCCCCEEECCC
TDMPADFALEY
CCCCCHHEECC
>Mature Secondary Structure
MLKKIIISAALMASLSAAMIANPAKADSVFEDNDAQSSLTDLSAATSSLDVLTKTMNDTV
CHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVSKVEKTQSVAKEVQSRADKLVSTAKKYMGVPYVWGGTTPAGFDCSGFTSYVYREVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
KEIGRTTWDQIASGKQVALDQAKVGDLIIFYGGDHVGIYLGNGQVIHAPQPGESVKISSV
HHHCCCHHHHHHCCCCEECCHHCCCCEEEEECCCEEEEEECCCEEEECCCCCCCEEECCC
TDMPADFALEY
CCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2780297 [H]