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The map label for this gene is llrE [H]

Identifier: 125624324

GI number: 125624324

Start: 1493690

End: 1494376

Strand: Reverse

Name: llrE [H]

Synonym: llmg_1520

Alternate gene names: 125624324

Gene position: 1494376-1493690 (Counterclockwise)

Preceding gene: 125624325

Following gene: 125624323

Centisome position: 59.08

GC content: 37.55

Gene sequence:

>687_bases
ATGACTTATCATGTATTAATTGTTGAAGATGAACCTAGTATTTCTGATTATGTTAAAAAAGAATTAGTCTTTGAAGATTA
TCAAGTATCAACAGCTTTTGATGGTCTTGCTGCCTTAGAGGTGTTTGAGCAAGCAAAACCAGCGGTAGATGTCGTCTTGC
TTGATTGGATGATTCCCAAATTAGATGGTTTGACCGTCTTACGACGCATGAAGAAAATTCAGCCCAATACACCGATTATA
TTTCTAACGGCGCGTGATTATATTGGTGATAAAGTTGCTGGTTTAGATGCTGGGGCGGACGATTATATCACTAAACCCTT
TGAAATTGAAGAACTTTTAGCTCGTCTGAGACTTATCTTTAGAAAGTGGTCAACTTCTCGCTCAAAAGTATATGAACTTG
ATTATCTAAAGGTAGATTTAACGGCTCATACAACGGAAGTAGCGGGAAAAACAGTGAATTTGACTCAAAGAGAATTTGCT
TTGTTAAGTTATTTTTTAGAACATCGTGGTATAGTGGTTAGTCGAGCAGATATTTTGGATGATGTTTGGGGAATGGATTT
TGATGGTCAGGAAAATACAGTAGATGCCTATGTGCGTTATCTGCGTGCTACAATTGATCTTCCAAATCATAAATCTCTGA
TTGAAACAGTTCGTGGAGTAGGCTATCGCTTGAATGGCGAAGGTTGA

Upstream 100 bases:

>100_bases
TATTCAGAAAAACGGTATGTTTTTTTTGTTTTAGGCTTGATATAATAAACTGGTAGTTAAAACTTAAATAAAGAAAGCTG
TTAAAGAGAAAGGGGAGGAA

Downstream 100 bases:

>100_bases
AAAATGAAAAGAGGTAGACCATGGAAAAAGTAAAAAACAAAGAAGAATTATTGGATGTCAGCTTTAACGCCATGCTTCTT
GGGAAAAGTATTTTTGCATT

Product: two-component system regulator llrE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTYHVLIVEDEPSISDYVKKELVFEDYQVSTAFDGLAALEVFEQAKPAVDVVLLDWMIPKLDGLTVLRRMKKIQPNTPII
FLTARDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIFRKWSTSRSKVYELDYLKVDLTAHTTEVAGKTVNLTQREFA
LLSYFLEHRGIVVSRADILDDVWGMDFDGQENTVDAYVRYLRATIDLPNHKSLIETVRGVGYRLNGEG

Sequences:

>Translated_228_residues
MTYHVLIVEDEPSISDYVKKELVFEDYQVSTAFDGLAALEVFEQAKPAVDVVLLDWMIPKLDGLTVLRRMKKIQPNTPII
FLTARDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIFRKWSTSRSKVYELDYLKVDLTAHTTEVAGKTVNLTQREFA
LLSYFLEHRGIVVSRADILDDVWGMDFDGQENTVDAYVRYLRATIDLPNHKSLIETVRGVGYRLNGEG
>Mature_227_residues
TYHVLIVEDEPSISDYVKKELVFEDYQVSTAFDGLAALEVFEQAKPAVDVVLLDWMIPKLDGLTVLRRMKKIQPNTPIIF
LTARDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIFRKWSTSRSKVYELDYLKVDLTAHTTEVAGKTVNLTQREFAL
LSYFLEHRGIVVSRADILDDVWGMDFDGQENTVDAYVRYLRATIDLPNHKSLIETVRGVGYRLNGEG

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=38.0090497737557, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=35.5263157894737, Blast_Score=146, Evalue=9e-37,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=36.2385321100917, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=35.8407079646018, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=33.0275229357798, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=32.2033898305085, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=34.375, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=31.6742081447964, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=29.4871794871795, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=32.4675324675325, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=33.1877729257642, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=29.5652173913043, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=27.7056277056277, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788550, Length=137, Percent_Identity=31.3868613138686, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788905, Length=109, Percent_Identity=34.8623853211009, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790299, Length=147, Percent_Identity=30.6122448979592, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=123, Percent_Identity=30.0813008130081, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25996; Mature: 25865

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYHVLIVEDEPSISDYVKKELVFEDYQVSTAFDGLAALEVFEQAKPAVDVVLLDWMIPK
CEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHEEHHHHCC
LDGLTVLRRMKKIQPNTPIIFLTARDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIF
CCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
RKWSTSRSKVYELDYLKVDLTAHTTEVAGKTVNLTQREFALLSYFLEHRGIVVSRADILD
HHHCCCCCEEEEEEEEEEEEEECHHHHCCCEECCHHHHHHHHHHHHHHCCEEEEHHHHHH
DVWGMDFDGQENTVDAYVRYLRATIDLPNHKSLIETVRGVGYRLNGEG
HHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCC
>Mature Secondary Structure 
TYHVLIVEDEPSISDYVKKELVFEDYQVSTAFDGLAALEVFEQAKPAVDVVLLDWMIPK
EEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHEEHHHHCC
LDGLTVLRRMKKIQPNTPIIFLTARDYIGDKVAGLDAGADDYITKPFEIEELLARLRLIF
CCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHH
RKWSTSRSKVYELDYLKVDLTAHTTEVAGKTVNLTQREFALLSYFLEHRGIVVSRADILD
HHHCCCCCEEEEEEEEEEEEEECHHHHCCCEECCHHHHHHHHHHHHHHCCEEEEHHHHHH
DVWGMDFDGQENTVDAYVRYLRATIDLPNHKSLIETVRGVGYRLNGEG
HHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]