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The map label for this gene is 124485671

Identifier: 124485671

GI number: 124485671

Start: 833847

End: 834560

Strand: Reverse

Name: 124485671

Synonym: Mlab_0849

Alternate gene names: NA

Gene position: 834560-833847 (Counterclockwise)

Preceding gene: 124485672

Following gene: 124485670

Centisome position: 46.24

GC content: 45.1

Gene sequence:

>714_bases
GTGATATTTAGAAACACCGTCGAGTTTCAGGTTTACGGCAAGCTGGCCCTATTTTCAGATCCGCTCACACGTGTTGGCGG
GGAGAAATTCACCTATCAGATCCCGACCTATCAGGCATTGAAAGGGATTTTAGAAAGCGTGTACTGGAAACCCACCTTTG
TGTGGTATATTGACTCGGTACGTGTGATGAATCAGATCCAGACCCAGTCAAAAGGGATACGCCCGATCAAATACACATCC
AGTGAAAATGAACTTGCGATCTACACGTATCTTACTGATGTAAGATATCAGGTTAGGGCACACTTTGACTGGAATTACGA
CCGACCTGAACTTGAAAAAGACAGAGATGAAAACAAACATCATTCTATTGCAAAAAGAATGATTGAAAAAGGCGGCAGAC
GTGATATTTTTCTTGGAACACGGGAATGTCAGGGGTATGTTGAACCATGCACATTCGGCGGGGATCCGGGGGCATATGAT
GATTGTTCCGAACTCGCTTTTGGCACAATGTTTCACGGCTTCACCTATCCCGATGAAGGCGGGAATGGGAAACTTATTGC
CAGATTCTGGAATCCGGTTATGAAGAGGGGTGTCATCGATTTCATTCCACCAGGTGAATGCACATTTACCCGGGAAATTA
AAAACTACAGCCTGAAGAGGTTTACGATCGGAGATAATCTTCAGTCGGTCCAGGAGTTGGCAGAGGAAATATGA

Upstream 100 bases:

>100_bases
AACACATCGTCGATTTCCTATGATGAAGAGTACGGCGTGATCTCCTCAAGTGATGCAGAATTAATTTTTTAAGCTTACTC
TAAGGAGGAGAGAAGGAAAC

Downstream 100 bases:

>100_bases
CCTGGATAACCAAACTCTACGAGACATATGAGAACTGTGGAAATACCGTCGGTATCGACAATGCAGATGGCAACGCGCCG
CTTTTGCCAATTGGACATAC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Family; CRISPR-Associated Cas5d Family Protein; Cytoplasmic Protein; CRISPR-Associated Protein; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Csd1 Family Protein

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIFRNTVEFQVYGKLALFSDPLTRVGGEKFTYQIPTYQALKGILESVYWKPTFVWYIDSVRVMNQIQTQSKGIRPIKYTS
SENELAIYTYLTDVRYQVRAHFDWNYDRPELEKDRDENKHHSIAKRMIEKGGRRDIFLGTRECQGYVEPCTFGGDPGAYD
DCSELAFGTMFHGFTYPDEGGNGKLIARFWNPVMKRGVIDFIPPGECTFTREIKNYSLKRFTIGDNLQSVQELAEEI

Sequences:

>Translated_237_residues
MIFRNTVEFQVYGKLALFSDPLTRVGGEKFTYQIPTYQALKGILESVYWKPTFVWYIDSVRVMNQIQTQSKGIRPIKYTS
SENELAIYTYLTDVRYQVRAHFDWNYDRPELEKDRDENKHHSIAKRMIEKGGRRDIFLGTRECQGYVEPCTFGGDPGAYD
DCSELAFGTMFHGFTYPDEGGNGKLIARFWNPVMKRGVIDFIPPGECTFTREIKNYSLKRFTIGDNLQSVQELAEEI
>Mature_237_residues
MIFRNTVEFQVYGKLALFSDPLTRVGGEKFTYQIPTYQALKGILESVYWKPTFVWYIDSVRVMNQIQTQSKGIRPIKYTS
SENELAIYTYLTDVRYQVRAHFDWNYDRPELEKDRDENKHHSIAKRMIEKGGRRDIFLGTRECQGYVEPCTFGGDPGAYD
DCSELAFGTMFHGFTYPDEGGNGKLIARFWNPVMKRGVIDFIPPGECTFTREIKNYSLKRFTIGDNLQSVQELAEEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27544; Mature: 27544

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFRNTVEFQVYGKLALFSDPLTRVGGEKFTYQIPTYQALKGILESVYWKPTFVWYIDSV
CCCCCEEEEEEEEEEEECCCCHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEHHH
RVMNQIQTQSKGIRPIKYTSSENELAIYTYLTDVRYQVRAHFDWNYDRPELEKDRDENKH
HHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCHH
HSIAKRMIEKGGRRDIFLGTRECQGYVEPCTFGGDPGAYDDCSELAFGTMFHGFTYPDEG
HHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
GNGKLIARFWNPVMKRGVIDFIPPGECTFTREIKNYSLKRFTIGDNLQSVQELAEEI
CCCCEEHHHHHHHHHCCCEECCCCCCCEEEEHHCCCCEEEEEECCCHHHHHHHHHHC
>Mature Secondary Structure
MIFRNTVEFQVYGKLALFSDPLTRVGGEKFTYQIPTYQALKGILESVYWKPTFVWYIDSV
CCCCCEEEEEEEEEEEECCCCHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEHHH
RVMNQIQTQSKGIRPIKYTSSENELAIYTYLTDVRYQVRAHFDWNYDRPELEKDRDENKH
HHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCHH
HSIAKRMIEKGGRRDIFLGTRECQGYVEPCTFGGDPGAYDDCSELAFGTMFHGFTYPDEG
HHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
GNGKLIARFWNPVMKRGVIDFIPPGECTFTREIKNYSLKRFTIGDNLQSVQELAEEI
CCCCEEHHHHHHHHHCCCEECCCCCCCEEEEHHCCCCEEEEEECCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA