| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485645
Identifier: 124485645
GI number: 124485645
Start: 801091
End: 801348
Strand: Reverse
Name: 124485645
Synonym: Mlab_0823
Alternate gene names: NA
Gene position: 801348-801091 (Counterclockwise)
Preceding gene: 124485647
Following gene: 124485644
Centisome position: 44.4
GC content: 60.47
Gene sequence:
>258_bases ATGCCCGGATTTGTTCCCCTTACCGTAAAAGAGCAGATCCATGCCCAGATCAGCGGGGCACTCGCGGGAGCATCGTTTCC GATCGACACCCCAGCCGCTCTCATCGTCGCGTTTCCAGACGGTGCAGACACGACCTGTCAGGTCGGCGATCTGAAGATGA CCGCAGGCGAAGCAGGCACCCTTCTAACGAGCGCAGATTTCCCGTTCACGAGCGCGAAATCGGTCGCCGACGTTATCGTC GAGCGGGCCGGCCTCTAA
Upstream 100 bases:
>100_bases GGCAGAAGAGTCCCTCAAAGCAATCAAGGGAGCATGCTTCGGATGCGAAACCCACAGCGCCGACTGCCCGATCGCAAAAG CCGCGGGAGAGGTTGCCGGC
Downstream 100 bases:
>100_bases GAAAACAGAACATCCATTCGATCCCTTCGGTATCCTGCCGAACCGGATCCGCTTTTTTATTTTTCCCATTCACCCGATCC GGCAAAAATACCGCAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MPGFVPLTVKEQIHAQISGALAGASFPIDTPAALIVAFPDGADTTCQVGDLKMTAGEAGTLLTSADFPFTSAKSVADVIV ERAGL
Sequences:
>Translated_85_residues MPGFVPLTVKEQIHAQISGALAGASFPIDTPAALIVAFPDGADTTCQVGDLKMTAGEAGTLLTSADFPFTSAKSVADVIV ERAGL >Mature_84_residues PGFVPLTVKEQIHAQISGALAGASFPIDTPAALIVAFPDGADTTCQVGDLKMTAGEAGTLLTSADFPFTSAKSVADVIVE RAGL
Specific function: Unknown
COG id: COG4746
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8590; Mature: 8459
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGFVPLTVKEQIHAQISGALAGASFPIDTPAALIVAFPDGADTTCQVGDLKMTAGEAGT CCCEECEEEHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEECCCCCE LLTSADFPFTSAKSVADVIVERAGL EEEECCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PGFVPLTVKEQIHAQISGALAGASFPIDTPAALIVAFPDGADTTCQVGDLKMTAGEAGT CCEECEEEHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEECCCCCE LLTSADFPFTSAKSVADVIVERAGL EEEECCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA