| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485624
Identifier: 124485624
GI number: 124485624
Start: 782834
End: 783268
Strand: Reverse
Name: 124485624
Synonym: Mlab_0802
Alternate gene names: NA
Gene position: 783268-782834 (Counterclockwise)
Preceding gene: 124485625
Following gene: 124485621
Centisome position: 43.4
GC content: 50.11
Gene sequence:
>435_bases ATGAGGAAACGTGCATTTCTCCTGGCGGTCATCCTGATTTTTGCCGTAATTTCGACAGCTGGATGCACATATCAGGCCAT ACATCTCGACACGGACAAAGAGCCTTACACTTCAACGACGCCGGAGATAGGCGGGCTCTTCAACATGTACGCCTACGATG ACTTCGTCATGTGGGAGTACATCGATGAGACAGCCGAGAAAATAATCTACGGAATCAATTTTAACGAAGGAGTCATCCCG GAGAATGACTGGCAAACGAAGTGCGAAGAGGCACTCACCGCGGTCAGAGAGTATCACGCGGCCAAGTATGGGGACGCACT CGAAATAAAAGACGTGACGATCCGCGAACAGTACGAAGACGGCCTGCATAAAGCCTATTGGACCTATTTGTCGCCCAATG AGCTGACATTCTCGGTGTTAACGGGGACAACTTAG
Upstream 100 bases:
>100_bases GAAAAAATGGTCTGACGGCCAATTCCTTTTTTGAAACAGTCGGATTTCGAAAACCCGGATTCGCGATACATATAAGGTGC CTGCAGGCAACTCTACACCT
Downstream 100 bases:
>100_bases AATTTATCGTGCCAGTATCCGGTGACCCGGCCGCTCAGCGCGAGCTGCCCAAGCCGCTTGTCGACCTCCGGCAGGATATC CCGGGGGGTGGACCCCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRKRAFLLAVILIFAVISTAGCTYQAIHLDTDKEPYTSTTPEIGGLFNMYAYDDFVMWEYIDETAEKIIYGINFNEGVIP ENDWQTKCEEALTAVREYHAAKYGDALEIKDVTIREQYEDGLHKAYWTYLSPNELTFSVLTGTT
Sequences:
>Translated_144_residues MRKRAFLLAVILIFAVISTAGCTYQAIHLDTDKEPYTSTTPEIGGLFNMYAYDDFVMWEYIDETAEKIIYGINFNEGVIP ENDWQTKCEEALTAVREYHAAKYGDALEIKDVTIREQYEDGLHKAYWTYLSPNELTFSVLTGTT >Mature_144_residues MRKRAFLLAVILIFAVISTAGCTYQAIHLDTDKEPYTSTTPEIGGLFNMYAYDDFVMWEYIDETAEKIIYGINFNEGVIP ENDWQTKCEEALTAVREYHAAKYGDALEIKDVTIREQYEDGLHKAYWTYLSPNELTFSVLTGTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16517; Mature: 16517
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRAFLLAVILIFAVISTAGCTYQAIHLDTDKEPYTSTTPEIGGLFNMYAYDDFVMWEY CCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCHHHHHHH IDETAEKIIYGINFNEGVIPENDWQTKCEEALTAVREYHAAKYGDALEIKDVTIREQYED HHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH GLHKAYWTYLSPNELTFSVLTGTT HHHHHHHEEECCCCEEEEEEECCC >Mature Secondary Structure MRKRAFLLAVILIFAVISTAGCTYQAIHLDTDKEPYTSTTPEIGGLFNMYAYDDFVMWEY CCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCHHHHHHH IDETAEKIIYGINFNEGVIPENDWQTKCEEALTAVREYHAAKYGDALEIKDVTIREQYED HHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH GLHKAYWTYLSPNELTFSVLTGTT HHHHHHHEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA