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The map label for this gene is fdhD [H]

Identifier: 124485621

GI number: 124485621

Start: 780078

End: 780710

Strand: Reverse

Name: fdhD [H]

Synonym: Mlab_0799

Alternate gene names: 124485621

Gene position: 780710-780078 (Counterclockwise)

Preceding gene: 124485624

Following gene: 124485620

Centisome position: 43.25

GC content: 56.87

Gene sequence:

>633_bases
ATGACAGCATTTCTGAATGGTTTACTGAATGAACAGCCGGTTTCCCTGACGGTAAACGGACGGGGGCTTGTGACCGTGAT
GATGCTGAAAGACATGACCGAGGAGTTTGCGGCCGGGTATCTGACGACGGAAGGGATCGTGCCGTATGCGGATATCGAGT
CGGTGATGCAGACGGAAACGGGCGTGAGCGTGCTGACGAAGAATCCGTTCAAGGTCCTGCTGCCGAAAAAAAGCGTGGTC
TCGGGTTGCGGGGGGACGGCGTCCTATCTGGATCCGGAGAAGCTGCCGGTGCTTGAGTCCTGCATCCCGGTCCCAAAGGA
TATTTTGAACCATACATTTTCCAGCGAGGTTATCAAAGCAGGAGGGTTTGGGGCGGCGGCGTTTGCCGAAGGAATGGGCG
CGGCATGTGCGGAAGATATCGGGCAGTTTACGGCTTTGGACAAGGTGGTCGGCCGGCTCCTTTTGGAAGGGATCCCGCCG
GAAAGCACCGCAGTCCTTGTCTCGGGAAAAGTGACGGCAGACCTCGTTAGAAAATGTCTGCATGCAAAGATCTCGGTGCT
GGCGTCGAAATTGCCGCCGACCCATCTCGCGGCCGAAGTGGCCAAGAACGGCAAGCTGACGCTGGTGTATTGA

Upstream 100 bases:

>100_bases
ACCAACAACAGATTATGTATAGGATGGACATACGTAAAGATACCACAATGATACACCCGCCATTCTTTTTAATGTACTAA
ACCCATACTCTATCATAACA

Downstream 100 bases:

>100_bases
GCGTAAAATAATAGTCAATCGCCTTGTTAAATTCACGTGTGCGGTACGTATTATTCAATTAGCGAAGGGCATGGTTCTGT
GTGGACACATGAGAAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTAFLNGLLNEQPVSLTVNGRGLVTVMMLKDMTEEFAAGYLTTEGIVPYADIESVMQTETGVSVLTKNPFKVLLPKKSVV
SGCGGTASYLDPEKLPVLESCIPVPKDILNHTFSSEVIKAGGFGAAAFAEGMGAACAEDIGQFTALDKVVGRLLLEGIPP
ESTAVLVSGKVTADLVRKCLHAKISVLASKLPPTHLAAEVAKNGKLTLVY

Sequences:

>Translated_210_residues
MTAFLNGLLNEQPVSLTVNGRGLVTVMMLKDMTEEFAAGYLTTEGIVPYADIESVMQTETGVSVLTKNPFKVLLPKKSVV
SGCGGTASYLDPEKLPVLESCIPVPKDILNHTFSSEVIKAGGFGAAAFAEGMGAACAEDIGQFTALDKVVGRLLLEGIPP
ESTAVLVSGKVTADLVRKCLHAKISVLASKLPPTHLAAEVAKNGKLTLVY
>Mature_209_residues
TAFLNGLLNEQPVSLTVNGRGLVTVMMLKDMTEEFAAGYLTTEGIVPYADIESVMQTETGVSVLTKNPFKVLLPKKSVVS
GCGGTASYLDPEKLPVLESCIPVPKDILNHTFSSEVIKAGGFGAAAFAEGMGAACAEDIGQFTALDKVVGRLLLEGIPPE
STAVLVSGKVTADLVRKCLHAKISVLASKLPPTHLAAEVAKNGKLTLVY

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 22005; Mature: 21874

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFLNGLLNEQPVSLTVNGRGLVTVMMLKDMTEEFAAGYLTTEGIVPYADIESVMQTET
CCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
GVSVLTKNPFKVLLPKKSVVSGCGGTASYLDPEKLPVLESCIPVPKDILNHTFSSEVIKA
CCEEEECCCEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHC
GGFGAAAFAEGMGAACAEDIGQFTALDKVVGRLLLEGIPPESTAVLVSGKVTADLVRKCL
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH
HAKISVLASKLPPTHLAAEVAKNGKLTLVY
HHHHHHHHHCCCHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
TAFLNGLLNEQPVSLTVNGRGLVTVMMLKDMTEEFAAGYLTTEGIVPYADIESVMQTET
CHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
GVSVLTKNPFKVLLPKKSVVSGCGGTASYLDPEKLPVLESCIPVPKDILNHTFSSEVIKA
CCEEEECCCEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHC
GGFGAAAFAEGMGAACAEDIGQFTALDKVVGRLLLEGIPPESTAVLVSGKVTADLVRKCL
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH
HAKISVLASKLPPTHLAAEVAKNGKLTLVY
HHHHHHHHHCCCHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]